Polyodon spathula (Mississippi paddlefish): 121296226
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Entry
121296226 CDS
T07273
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121296226 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121296226 (phc1)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
121296226 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
121296226
NCBI-ProteinID:
XP_041077489
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All DBs
Position
21:complement(16400791..16461118)
Genome browser
AA seq
1078 aa
AA seq
DB search
METDGDQNSGVANGNTASGGNSRPTQIAQMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QHISSAQLHSFAAVQQATLTASRQASSPNASFAQLTSTSQATMNLTTSSGGGALLTSRAT
GPAPSTQASALNQSVLLGSAGAGQGQMYLRVNRSLRTPLSSQFILMSGGAAAMATVQQQQ
QQQQQQEVPATNTSGHPDINQVQKQALRCPPSSAVLSVSAAPGPAQRTTLPKTEGAGQGE
KKAGEAESGGGGVGINLTRNISNSQATLITTAPYSLLQQQFTSHQQQKSNPSQQQLLMHH
QQQSASSLATHHTNQQQHQQANSAATAMQQTHHCTASSANATSNNSHCLASLANTSAHQQ
QHPSSSQSSRQMVLHTSTLSYQPRAITSVTNTAQILHTSVAVGLSQSTQSIGGAQTLVVQ
PLPPQNQTYENRLSVTRHSNLTPVPIQPKTSSQTVTAATQLKIPVPGSHCHTQFPVKHPP
PILPAPPSHAPHIPVQLVGARQPGQVSAQALGLTQVIAVSSAQSCNSNSSTMGHIHNVQH
SGVAQQHVHVKPLSGAVHDNSQANQHQQGGGGGGGGGGEKVQPVGSGNVGVSAATTSFGN
VGMGFSSLVTTAAVLPQQLQLPHQQSLQQHQQKQQPKIVRPCSGAICGSVLGPGSISGAS
AATQTSATDVSAKTGAAAASGVYVQPLQLQVKQPVGGIKRKAEAGEQNEKKRESPPSLHP
SLEGPYQKPDNTPEKNQASDLTPLVPSLSSPLTASRGVASDPSLLSSGHHGNDSKPPQAI
VKPQVLTHLIEGFVIQEGAEPFPQLMSASKQQNPQNDDTELISTSSTVGGPVKDRQEGVS
SLLAFSPSSLPDHYYQNTVSNGKSSLLKCEYCGNLELALQFRGSKRFCSMTCAKRYNVSC
IHQFRPKHKKVKGARLGDGGGVRMRRRGPHRSSSEIPCSKITVRNLDNKTRSDSSQGSGE
NSSYEDEAPSPNLSPSCSQPSHSEQAAHDSSGSAPAELPLHGEPHFLSENPAHWSMEEVC
EFISSLHGCQEVATEFLAQKIDGQALLLLKEEHLMTAMNIKLGPALKICAHINMLKEG
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggagacagatggtgatcagaactctggcgtggccaatgggaacacagcctccggggga
aattctcgacccacacagatagcacagatgtcgctgtatgagagacaggctgtacaggct
ctccaggcattgcagaggcagcccaatgcagctcagtacttccagcagttgatgctccag
cagcatatcagcagtgctcagctccacagtttcgcagccgtgcagcaggctacacttaca
gccagcagacaggccagttctcccaatgccagctttgcgcagctcaccagtacatcccag
gctactatgaacttaaccacatcttctgggggcggtgccttgctgacatcacgagcaaca
ggccctgctccctccacacaggccagtgctctgaaccagtcagtgctgctgggcagtgca
ggagcggggcaagggcagatgtatctcagagtgaaccgctctttgagaactcccctctcc
tctcagttcatcctcatgtcgggcggggctgctgccatggcaacagtccagcagcagcag
cagcagcaacaacaacaggaagtcccagccacgaacaccagtggccatcctgacatcaac
caggttcagaaacaggcactacgttgccctcccagctctgcagtgttgtctgtctcagct
gctccgggacctgctcagagaaccactctgcccaaaacagagggagcgggacagggggag
aagaaagcaggagaggcagagagtggaggcggaggagtgggcatcaatctcaccaggaat
atcagcaactcgcaggctactcttattactacagcaccttactcattgcttcaacagcag
ttcacttctcaccaacaacaaaaatcaaatcccagccagcagcaacttttaatgcatcac
cagcagcaatcagcaagcagtctggctacacaccacacaaatcaacaacagcaccagcaa
gcaaacagtgcggccacagccatgcagcagacgcatcattgtaccgcatccagtgccaac
gcaacttcgaacaattcccattgccttgcatcactggccaacacatccgcccaccagcag
caacaccccagctcctcccagtcctcccggcagatggtcctccatacctccactctcagt
taccagccccgagccatcacttcagtgaccaacaccgctcagattctgcacacctcggtg
gcggttgggctgtcgcagagcacccagtccatagggggagcccaaacactggtggtgcaa
ccattaccaccccagaatcagacctacgaaaaccgcttgtcagtaacccgtcacagcaac
ttgacaccggttcccatacaacccaaaactagttcacaaacagtgactgcagctacccag
cttaagatcccagttccgggttcccattgccacacccagttcccagtcaaacaccctccc
cccattttaccagcccccccttctcacgctccccacattccggttcagctggtaggagcc
aggcagccagggcaagtgagtgcccaggctttgggcctaacccaagtgatcgccgttagc
agcgcgcaaagctgtaacagtaacagcagcacaatgggtcacattcataatgttcaacac
agtggggtcgctcagcaacatgttcatgtcaagcctctttctggggctgtccatgacaac
agccaggccaatcagcatcagcaaggaggaggaggaggaggaggaggaggaggcgagaag
gtccagccagtgggatctggtaatgtgggtgtgtctgccgccaccacttcttttgggaat
gtcggtatgggcttctcttcgctggtgacgacggcagctgttttaccccagcaactgcag
ttaccacatcaacagagcctccagcagcatcagcagaaacaacagcccaagattgtcaga
ccctgttctggtgccatttgcggttctgttttggggcctggaagcattagtggcgctagt
gccgccacgcagacctctgcgacggatgtgtcagcaaagacaggagctgctgcagccagc
ggagtatatgtgcagccactgcaactgcaggttaagcagccagtgggaggaataaaaaga
aaggcagaggcgggtgaacaaaatgagaaaaagagagagagccccccctcccttcatcca
tcattggaggggccataccaaaaaccagacaataccccagagaaaaaccaggcctcagac
ctcactccacttgtcccctccctctccagccccctcactgcctccaggggcgtggcctca
gacccctccctcttgtccagtggtcaccacgggaacgattccaagcctccccaggccatt
gtgaagccacaggttctgactcatctcatcgagggctttgtgattcaggagggcgcagaa
ccttttcctcaattgatgtcagcctcaaaacaacaaaacccacagaatgatgatacagaa
ctaatttcaacaagttcaactgtgggtggaccagtgaaagacaggcaggaaggagtgtcc
tctctcctagccttttctccttcctcacttcctgatcactactatcaaaacacagtctcg
aatgggaagtcctctctgttgaagtgcgagtactgtggcaacctggaactcgcgctgcag
ttcagaggatccaagcgcttctgctccatgacctgtgccaagaggtacaatgtgagctgc
attcaccagttccgcccgaaacataagaaagtgaagggggccaggcttggggatggggga
ggagtcaggatgaggcgcaggggtcctcacaggagcagcagcgagattccctgctcaaaa
atcactgttagaaaccttgataacaagactcgctctgattccagccaaggctcgggtgag
aactccagctatgaagacgaggctccctccccaaacctctccccttcctgctctcaaccc
tcccactccgagcaggctgcgcatgattcatccggatccgctcctgctgagctgccatta
catggtgagcctcacttcctgtctgagaaccctgcccactggagcatggaggaagtgtgc
gagttcatttcctctctgcatggctgccaggaggtggcaacagagtttctagctcagaag
attgacgggcaggccctgctgcttctgaaggaagagcacctgatgactgccatgaacatc
aagcttggaccagcgctgaagatctgtgcgcatatcaacatgctgaaggagggctag
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integrated database retrieval system
