Polyodon spathula (Mississippi paddlefish): 121296349
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Entry
121296349 CDS
T07273
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00514
Other types of O-glycan biosynthesis
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121296349
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121296349
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121296349
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
121296349
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
O-Glycan
121296349
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
121296349
NCBI-ProteinID:
XP_041077738
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Position
21:25511474..25524814
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AA seq
407 aa
AA seq
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MHLSQVGISKLCFLLSLVFCAFLLLLIPGLQPLRRQGDLPQPRSQGKTGWVKGDSVDQQP
LKPNVLQLIRAATPGPDTEGVLDMKDWPVGPLQTVDERSNSAEVLGRNLSAYDLDKRDSL
AYSSSSSRQGLPVKEPLKQGDIFIAVKTTRKYHKSRLDLLFQTWISKAKKETFIFTDGED
KELREKAGDHMINTNCSAAHTRQALCCKMSVEYDKFIESGKKWFCHVDDDNYVNLASLLR
LLSSYSHTQDVYLGRPSLDHPIEAAERVKSDGSISVKFWFATGGAGFCISRGLALKMSPW
ASLGNFISTAEKIRLPDDCTIGYIIEALLEVKMIHSRLFHSHLENLQRLPINTVLSQVTL
SYGGFESHRNVVSIGGAFSLVEDPSRFKTVHCLLYSDTKWCSSKRRP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcacctctcccaggtcggaatcagcaagctctgcttcctgctctcgctggtcttctgt
gccttcctgctcctcctgatcccgggcctccaacctctacggaggcagggcgacctcccc
cagccacgttctcaaggcaagacggggtgggtgaaaggagacagcgtcgaccagcagcct
ctcaaacccaacgtcctccagctcatcagggctgcgactccaggtcctgatactgagggg
gttttggatatgaaagactggcctgtaggcccgctgcaaactgttgacgagagaagcaac
agcgctgaagtcctgggcaggaacctgtctgcctacgatctggataaaagagactcattg
gcttactcaagtagcagcagtcgccaaggcttgccagtgaaggaacccttgaagcaggga
gacatatttattgctgtgaaaacaacaaggaaataccacaaatctaggctggatcttctg
tttcagacctggatatccaaagcaaaaaaagaaacttttattttcaccgatggggaagat
aaggagctaagagaaaaagcaggagatcacatgattaatacaaactgctccgctgcgcac
acccgacaggcactgtgctgtaaaatgtctgtggaatatgacaagttcatcgaatcagga
aaaaagtggttctgtcacgtggatgacgataactacgtgaacctggccagcctgctgcgc
ttgctgtcctcctactcccacactcaggacgtgtatctgggccgccccagcctggatcac
cccatagaggctgccgagagagtcaagagcgatggatcgatctctgtgaagttctggttc
gccactggaggggctggtttctgtatcagccgagggctggcactcaaaatgagtccttgg
gccagtctgggtaacttcatcagcactgcagagaagatccgtctcccagacgactgcact
atcggctacatcatcgaggccctgctggaagtgaaaatgatccacagccggctgttccac
tcccacctggaaaacctgcagagactgcccatcaacacggtcctcagccaggtgacattg
agctacggtgggtttgaaagccacaggaatgtcgtcagcatcggtggggcattctcactg
gtggaggatccctcacggttcaagactgtacattgccttctctactctgatactaaatgg
tgtagcagtaagagaaggccatga
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