Polyodon spathula (Mississippi paddlefish): 121296520
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Entry
121296520 CDS
T07273
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 6-like
KO
K05697
tyrosine-protein phosphatase non-receptor type 6 [EC:
3.1.3.48
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04148
Efferocytosis
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121296520
09144 Cellular community - eukaryotes
04520 Adherens junction
121296520
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121296520
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121296520
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
121296520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
SH2
SH2_1
Motif
Other DBs
NCBI-GeneID:
121296520
NCBI-ProteinID:
XP_041078116
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Position
21:complement(17882839..17921998)
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AA seq
456 aa
AA seq
DB search
MVRWFHRDLSGVDAEAMLKSRGMHGSFLCRPSRKNQGDFSLSVRVGELVTHIRIQNTGDF
YDLYGGEKFATLSELVEYYTTEHGTLQDRDGTLIELRYPLNCSEPTSERWYHGHLSGQAA
EKLLWQKGEEGTFLVRESLSKPGDFVLSILTGESMEVNGDQRNRVSHVKIMCKGGRYTIG
GVEQFENLTDLVEHIKQNVIEEVSGTKVYLKQPYYSTRINAADIDSRVQVLTKTNETDEA
SKNKAGFWEEFDALQKQEAKLKKSRNEGMRPENKSKNRYKNILPFDETRVILQSGDPRII
GSDYINANYISNLLTESCDRKKFIASQGCLATTVNDFWEMVWQERSRVIVMTTREVEKGR
NKCARYWPEPKETKEFGSFLVRHVSEHDAVDYTVRVLQISPLNQSDDQRKIWHYQYLSWP
DHGVPTEPGGVLSFLEQVNNRQSELRNAGPIIVHCR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggttaggtggttccatcgtgatctcagtggggtcgatgctgaggcgatgctgaaatcc
cgcggaatgcatggcagcttcttatgccgcccaagccgcaagaaccagggagatttctcc
ctgtctgtcagggtgggtgagctggtgactcacattcggatccaaaacacaggtgatttc
tatgacctgtacggaggggagaagtttgccacgctgtcagagcttgtggagtattacacc
acagagcacgggaccctgcaggaccgggatgggaccctcatcgagctgcgctaccctttg
aactgctccgagcccacctctgagaggtggtaccacgggcacctgtctggtcaggctgct
gagaagctgctgtggcagaagggggaggagggcacctttctggtgagggagagtctgagc
aagcctggggacttcgtcctgtcaatcctgaccggagagagcatggaggtgaacggagac
cagaggaacagagtctcacatgtcaagatcatgtgcaagggtggtcgctacactattgga
ggtgtggagcagtttgaaaacctcactgacctggtggagcacattaaacagaatgtgatc
gaagaggtgtctggaaccaaggtctacctgaaacagccctactactcgacccgtatcaac
gctgcagacatcgacagccgcgttcaggtcctgacaaaaacaaacgagactgacgaggcg
agcaagaacaaggcgggattctgggaggagttcgacgctcttcaaaagcaagaagccaaa
ctgaagaagagccgcaacgaggggatgagaccagagaacaagagcaagaaccgctacaag
aacatcctgccctttgatgagactcgagttatcttgcagtcaggtgatcccagaatcatt
ggctctgattacatcaatgcaaactacatctcgaatttgctgacagagtcatgtgacagg
aaaaagttcatcgcctcacagggctgcctcgccactacagtcaatgacttctgggagatg
gtgtggcaggagaggtcaagagtcatcgtcatgaccaccagggaggtggagaagggaagg
aacaagtgtgctcgttactggccggagccgaaggaaacgaaggagttcgggtcgttcctg
gtgagacacgtgagcgagcatgacgccgtcgactacaccgtgagagtgttgcagatcagt
ccactgaaccagagtgatgaccagcgcaagatctggcactaccagtatctcagctggccg
gatcacggggtccccacggagcccgggggggtgcttagcttcctggagcaggtgaacaac
aggcagagtgaactaaggaatgccgggcccatcatagtgcactgcaggtaa
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