Polyodon spathula (Mississippi paddlefish): 121296716
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Entry
121296716 CDS
T07273
Symbol
slc6a2
Name
(RefSeq) sodium-dependent noradrenaline transporter
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121296716 (slc6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121296716 (slc6a2)
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121296716 (slc6a2)
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GFIT
Motif
Pfam:
SNF
Caudo_bapla_N
Motif
Other DBs
NCBI-GeneID:
121296716
NCBI-ProteinID:
XP_041078417
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Position
21:1727626..1750597
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AA seq
626 aa
AA seq
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MNAQVHSDHKLSTVVPLTQYTTVEKKDVELILVKEINGVQYTNTAIIAVPETRVQVSSSE
DEERETWGKKIDFLLSVIGFAVDLANICRFPYLCYKNGGGAFLIPYTLFLVIAGMPLFYM
ELALGQYNREGAATVWKICPVFKGVGYTVIIIALYVGFYYNVIIAWSLYYLFASFTSEVP
WLRCGNPWNSPDCIDPKLLNGCVLLGNETKYSKYKITPAAEYYERGVLHLHESEGIHDLG
PPRWQLVLCLLVVVFILYFTLCKGVKTSGKVVYITATMPYVVLFVLVIRGITLPGAMDGI
RAYLHVDLKRLNNATVWIDAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDAILTSTINC
VTSFFSGFAIFSVLGYMAYMHGVNIEDVATEGPGLVFIIYPEAISTLPGSTFWSIVFFLM
LLTLGIDSSMGGMEAIITGLADDFKILKRNRKLFTFVTAFGTFLVALSCVTNGGIYVLTL
LDSFSAGTSILFGVLIEAIGVSWFYGVDRFSEDIERMMGFKPGLYWRLCWKFVSPAFLLF
VVIASIVKMETLTYDDYTFPPWASLIGWGITMSSVLFVPAYAIYKFLTVRGTFKERLAYC
ITPENEHHLVAEGNVRQFKLKHWLAI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcaagtccactcggaccacaagctgtcgaccgtggtccccctcacacagtac
actaccgtggaaaagaaggacgtggagctgattctggtgaaggaaataaatggggttcag
tacaccaacacagccatcatcgctgtcccggagacgcgcgtccaggtcagctcctccgag
gacgaggagagggagacgtggggcaagaaaatcgattttctcctgtctgtcatcggtttc
gcggtggacctggctaatatctgcagattcccttatctgtgttacaaaaacggcggaggt
gcctttctgataccctacacccttttcctggtcattgctggcatgcctctcttttacatg
gagctggcattggggcaatataatcgggaaggagctgccactgtctggaaaatctgccct
gtttttaaaggtgtgggctacactgtgatcattatagccttgtatgtgggcttctactac
aatgtaatcatagcctggtctctgtactacctgttcgcctcgttcacctccgaggtgccc
tggctgcgctgtggaaacccttggaacagccctgactgcatcgaccccaagctgctgaac
ggctgcgtgctgctgggcaacgagaccaagtactccaagtataaaatcactcccgctgca
gagtattacgaacgaggagtgttgcacctccatgaaagtgaagggatccatgacctgggc
cctccgcgatggcagctggtgctgtgtctcctggtagtggtcttcatcctttacttcacc
ctctgcaaaggagtgaaaacctctggcaaggtggtgtacatcacagccactatgccgtac
gtggtgctgttcgtgttggtgatccgtggtattaccctgccgggggctatggatgggata
agagcctacctgcacgtagacttaaaacgcctgaacaacgccacggtctggattgatgca
gccacccagatattctattccctaggagcaggatttggagttttaatcgcatttgccagc
tataacaagtttgacaataactgctacagggatgctattctcacaagcactataaactgc
gtgacgagcttcttctcaggatttgctatcttctcagtcctcggctacatggcctatatg
catggggttaatatagaggatgtagcaactgaagggccaggattggtgttcatcatctat
ccagaagccatttcaaccctaccaggttcaacattctggtcaatagttttcttcctcatg
cttttaacgctgggcatcgacagttccatgggaggcatggaagcaatcatcacgggtctg
gcggatgatttcaagatcctgaagagaaacaggaagcttttcacctttgtgacggcattc
ggcaccttcctagtagctttgtcttgtgttacaaatggtggaatttacgtcctgactctg
ctggactcgttttcagcaggaacatccattctgtttggagtattgatagaggccatcgga
gtatcctggttttatggcgtggaccgattcagtgaagacatcgagcgcatgatgggcttc
aagccaggtctttactggaggctctgctggaagttcgttagccctgcctttctgctgttt
gtggtgatcgccagcatcgtaaagatggaaacactgacctacgatgactataccttcccc
ccctgggctagcctgatcggctggggaataacaatgtcatcagtgctctttgtacctgct
tatgccatctacaaattcctgacggtgcgaggcacatttaaagagaggttggcttactgc
atcacccctgagaatgagcatcatcttgtagctgaggggaatgtccggcaatttaagctg
aagcactggctggctatatga
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