Polyodon spathula (Mississippi paddlefish): 121297214
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Entry
121297214 CDS
T07273
Name
(RefSeq) mothers against decapentaplegic homolog 5-like isoform X1
KO
K16790
mothers against decapentaplegic homolog 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04081
Hormone signaling
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121297214
09133 Signaling molecules and interaction
04081 Hormone signaling
121297214
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
121297214
NCBI-ProteinID:
XP_041079294
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Position
22:3599426..3606148
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AA seq
465 aa
AA seq
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MSTMSSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEDLEKALSSPG
QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLEVCEYPFGSKQKD
VCINPYHYKRVESPVLPPVLVPRHSEFNAQLSLLVQFRNLSHNEPHMPHNVTFPESFQQH
SGGNSFSVSPNSPYPPSPASSGPYTSSPASSGPSSPFQLPADTPPPAYMPPDEQMCQDSS
QSMETGNSSTIPVNMPRGGMQPVEYVEPKYWCSIVYYELNNRVGEAFYASSTSVLVDGFT
DPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDTSIFVQSRNC
NYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNDGFEAVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEVHLHGSLQWLDKVLTQMGSPLNPISSVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaatgtccagcctgttctctttcactagcccggcagtgaagcggctcttgggg
tggaagcagggggatgaagaggagaagtgggctgagaaagccgtcgacgcactggttaag
aagctgaaaaagaagaagggtgccatggaagatctggagaaggcgctgagtagccccgga
cagccgtcgaaatgcgtcaccatccctcgctccctggatggccggctccaagtgtcccac
cgcaagggccttcctcatgtgatctactgccgtgtctggcgctggcctgacctgcagagc
caccatgagctcaagccccttgaggtgtgcgagtatccctttggttccaagcagaaggac
gtctgcatcaacccttaccactacaaacgagtggaaagcccagtgttgcctccggttctg
gtgcccaggcacagtgagtttaacgcacagctcagcctcctggtccagttccgcaacctg
agccacaacgaaccccacatgcctcacaacgtcaccttcccggagtcctttcagcagcac
agcgggggcaactccttctccgtctcacccaactccccctacccaccctcccctgccagc
agtggcccctacaccagctctcccgccagctcagggccctccagccccttccagctgcca
gcagataccccacccccggcctacatgcctccagatgagcagatgtgtcaggatagctcc
cagtcaatggaaacagggaacagcagcactatccctgtgaatatgcccaggggaggtatg
cagccagtggagtatgtggagcctaagtactggtgttccattgtgtattacgagctgaat
aaccgagtgggagaggccttctatgcttcttccaccagcgtgctggttgatggcttcaca
gacccctccaacaacaagaaccgattctgcctgggcctgctatccaacgtcaaccgcaac
tccacaatcgagaacacccggcgccacatcggcaaaggagttcatctttactatgtcggt
ggagaggtctatgccgagtgcctgagtgacaccagcatcttcgttcagagcagaaactgc
aactaccaccacggcttccatcccaccactgtgtgcaagatccccagcggctgcagcctc
aagatcttcaataaccaggagtttgcgcagctgctggctcagtccgtgaacgatggcttt
gaggccgtctacgagctcaccaagatgtgcacaatccgcatgagcttcgtcaagggctgg
ggagcagaataccaccgtcaggacgtcaccagcaccccctgttggattgaagttcatctc
catggctccctccagtggctggacaaagtactgacacagatgggctcccctcttaaccct
atctcatcagtctcctaa
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