Polyodon spathula (Mississippi paddlefish): 121297301
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Entry
121297301 CDS
T07273
Symbol
sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
pspa04140
Autophagy - animal
pspa04217
Necroptosis
pspa04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121297301 (sqstm1)
04137 Mitophagy - animal
121297301 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
121297301 (sqstm1)
04218 Cellular senescence
121297301 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121297301 (sqstm1)
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121297301 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121297301 (sqstm1)
Membrane trafficking [BR:
pspa04131
]
Autophagy
Mitophagy
Cargo receptors
121297301 (sqstm1)
Pexophagy
121297301 (sqstm1)
Aggrephagy
121297301 (sqstm1)
Xenophagy
121297301 (sqstm1)
ER-phagy
ER-phagy recepters
121297301 (sqstm1)
Other autophagy associated proteins
Midbophagy
121297301 (sqstm1)
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121297301 (sqstm1)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121297301 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
zf-B_box
Motif
Other DBs
NCBI-GeneID:
121297301
NCBI-ProteinID:
XP_041079476
LinkDB
All DBs
Position
22:complement(9121160..9126923)
Genome browser
AA seq
432 aa
AA seq
DB search
MSMTVKAYLLGKEDAHKEIRRFTVDQGVSSSFEYLSRKVAEVFQCLKIVNFNMYYKDEDG
DMIAFSSDDELMMGLSCMKDDTFRIFIKEKKDSKREFHPGAAQGTDRPCPFPPQPSPNMV
HPGVTCDGCEGQVVGTRFKCTVCPDYDLCSPCQAKGIHREHPLLPIWSPFLNMSEWLPRG
KWMRKMRHRFPHCVWAGAQNRPHSSQPGPQPAQENTTGEPAGVSENQASVDFLRNIGEGV
AASLNQLGIDVDIDVEHGGKREKVTLSKPSFDGAPTANNGNTENGGESTAAEPMVSDLAE
DGQSGGIQTNNNGASKGQKEPGCDEEWTHLSPKEVDPSTGELQSLRMEELDEGPSSLNPS
LQGATGLREAALYPHLPQNADPRLVESLAQMLSMGFSDEGGWLTRLLQTKNFDIGAALDA
VHYSKTTAPPRK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgactgttaaggcctatctccttggtaaggaagatgcccacaaggaaattcgc
aggtttaccgtggatcagggggtttctagcagcttcgaatacctgtccagaaaagtggcg
gaggtcttccagtgcctgaagattgtgaatttcaatatgtactacaaagatgaagatgga
gacatgattgcattctcctccgacgatgagctgatgatgggactgtcatgtatgaaggac
gacaccttccgcatctttattaaagagaagaaagacagtaagcgtgagtttcacccaggt
gcagcacagggcacagatcggccctgcccttttccacctcaaccctccccaaacatggtc
caccccggggtgacatgcgatggctgcgagggtcaggtcgtgggtacgcgtttcaagtgc
actgtctgcccagactatgacctgtgttccccctgccaggcgaaggggattcatcgggag
catcctctcctccccatctggtctccctttctgaacatgtcggagtggctccctaggggg
aagtggatgcgcaagatgagacatcgctttccacactgtgtgtgggccggagcccagaac
aggccccacagcagccagcctggcccacagcctgctcaggagaacactacgggagagcca
gcaggagtctctgaaaaccaggccagtgtagattttctgagaaacattggagagggcgtg
gcagcttcactgaaccagctgggtatcgatgttgacattgacgtggaacatggtgggaag
agggaaaaagtgaccctgtccaagccttcctttgatggagcccctactgcaaacaacgga
aacacagaaaatggtggggagagcactgctgcagagcccatggtcagcgacttggcagaa
gacgggcagagtggtggaatacaaactaacaacaatggggcctccaaggggcagaaagaa
ccaggctgtgacgaggagtggacccacctgtccccaaaggaagtagacccctcgactggg
gagctgcagtctctcagaatggaagagttagacgaggggcccagctccctaaacccttcc
cttcagggcgccaccgggctgagagaggctgctctttacccacacctgccacaaaacgca
gacccgcgcctggtcgaatctcttgctcagatgctgtcgatgggattcagtgatgaaggc
ggctggctgactcggctcctccaaaccaagaacttcgacatcggggcagcactggatgcc
gtccattactccaaaactactgctccgccccgcaaatag
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