Polyodon spathula (Mississippi paddlefish): 121297955
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Entry
121297955 CDS
T07273
Name
(RefSeq) plexin-D1-like isoform X1
KO
K06822
plexin D
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121297955
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
PSI_PlexinA-B
TIG_plexin
TIG_2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
121297955
NCBI-ProteinID:
XP_041080524
LinkDB
All DBs
Position
23:complement(12976877..13028772)
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AA seq
1897 aa
AA seq
DB search
MPPSERVRLLLRDLFLVVFINTNHHYARGLEVQQVFKSPDPTNNFAVNEVSNKVYLASVN
RIYQLDGNLSLEIEEKTGPVLDNMLCHAQQLPHASCEHPKVLTDNYNKVLQLDRDQHVAV
VCGSVYQGFCALRKLENISEIAVEFPPQGDHKVTVFPSMLNIAANHPNASTVGLILKSAG
GNTRLLVGATYTGVGTAFFPKNHSKEDLRFENTPEIAIRSLNVNELSRLFTYHINPSEDN
VFKIKQEVKPKNKLSFVHAFIQKTYSYIAMNNDANLGEKANEPNSILARICLDNKTKQKE
CKKLTESYIQMGLQCGSDGSVFNRLVSVFSARVYLSSHLEERDLLFGIFEKSNKKSAVCV
FQFSDIENSIRNARKTCLSETNSGDVSVLDSVIQGTGAGCVKKNIVLQLEQLDCGAAHLQ
HPLALRKPLKASPVFESSGLTAVAVASVNDHTIVFLGTATGKLHKLNLLKNLTLGSQNSI
QVASRESVHHIMSFDPSDNNYLYLMTSYQMIRVKVAKCDLYSTCNQCLGAADAYCGWCTL
ESRCSLQRDCRDWKQPHFWISLSEGINMCPSMTITPSEINLASTFKDVGILINGSVPDLH
RTKVECDYGNGVSTEATIYGIDSAPSQIHSCPFLPKEKYPEFPPGQDHITICTTIKVNGM
SVVWGNITIYDCERTGMFNAKTACTSCLNAKWKCYWNVKTFACVSSNLDSKDLLEDSALC
PKLIPDALDPIATGTTQDITFSLANTKTLQGTGLQCCFGSDQCSEVSWVNTITIVCHNVK
LYTTEDSQHIPVHLRLKEHPDKFIDSPKPMRVEVYNCMSGNTDCSQCWGREDLGHRCVWC
ENSCRMRSECKAVQESCSAPEIRKIEPLSGPLEGGTLLTIQGRNLGRRFSDITVSIRGVG
CRPLQDRYIVSEVIVCETEKAPAMFSSVVSVIVGTEGKSKETFSYLNPEVTSIEPNFGPK
AGGTKVIISGKNLDVGSRIRVLVNGTKECTSLLRTQDSIKCTMPAALLPKTESVQVCIQF
ESNPCPSSSNSTMYTYMENPVISEISPKTSHISGGRILTLKGQEFNLIQNISMVVLRIGK
EPAICAVQSPTIITCPSPAASNSTEEQPVKFYINGVLYTGDGSAVHRMPDYDDDSHSSSF
YMHYCEDPHFYIANKEKWIKHHHGEPLTLVIMKAKNCLDLRPEEYKVMIGSIPCEISFNN
EKVFHCTINGSLSSTERQLPVIVQVGNFKEEIARVHLGGNEMAIIVSIVVCSILLLVCTV
ALGVFCTKSRRAERYWQKTLLQMEEMESQIRDEIRKGFAELQTDMTDLTKELNSSQGIPF
LEYKHFVTRTFFPKQCSDYERSFVQPIYQNHPQAAVTPQETHPLLQDWKSSNPVKPNTEE
GIALFSTLLNNKHFLVTFVHALEQQKDFAVRDRCNIASLLTVALHEKLEYYTSIMKELLV
DLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLKEKVGEPFFLLLCAIRQQINKG
SIDVLTGKARYTLNEEWLLRENIEAKPVNINVSFQGFGMDSLTVRVMNTDTICQVKEKIL
EAFYKNLPFSQWPRAEDLDLEWFASSSDSRILRDLDDTTLMEDGRKKLNTVLHYKIPEEA
SLAISLKDKRDNTLGRVKDLDTEKYFHLVLPNDELMENKKSHRQSHRKKVLPEIYLTRLL
STKGTLQKFLDDLFHAILSIPEDKPPFAVKYFFDFLEEQADKRGITDPDTLHIWKTNSLP
LRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYAKEI
PEYKKTVQQYYKQIQEMMPLSEQEMNAHLAEESRKYRNEFNTNSALAEIYKYAKRYQTQV
VNALEANPTTKRMQLQHKFQQVIALVEDNIYECCSEA
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttctgaaagagttcggcttcttcttcgggacttgtttttggttgtctttatt
aataccaaccaccactatgcaaggggacttgaagttcagcaggtattcaaatctccagac
ccgaccaacaactttgcagtgaatgaagtttccaacaaagtatacctggcgagcgtgaac
aggatttatcaactggacggtaatttgagcctggagattgaggagaaaacgggacctgtt
ttggataacatgctctgccatgcgcagcagcttccccatgcctcctgcgagcaccccaaa
gttctgacagacaactacaacaaggtcctgcagctggaccgggaccagcacgtggctgta
gtatgtggttcagtttaccagggtttttgtgcgctaagaaagctggagaacatttccgaa
atcgctgttgaattccccccacagggagaccacaaggtgacagtttttccaagcatgctt
aatattgctgccaaccaccccaatgcttcaacagtcggactcatcctcaagagcgctggg
ggtaacactcggctactggttggggcgacttataccggcgtgggcacggcgtttttcccc
aagaaccacagcaaagaggacttgaggtttgaaaacacacctgagatagctattaggtcc
ctaaacgtcaatgagctgtcgaggcttttcacctatcatataaatccatcggaagacaac
gtgtttaagattaagcaagaagtcaaacccaagaacaagctgagttttgttcacgctttc
attcagaagacatattcttatatcgcaatgaacaacgacgccaatttaggggaaaaggcg
aacgagcccaatagcatattggcgaggatttgtctggacaacaaaaccaaacagaaagag
tgtaaaaagcttaccgagtcttacatccaaatgggtcttcagtgtggttctgacggcagc
gtgttcaacagactggtttctgttttctctgctagagtatatctttctagccacttagaa
gaacgagacctcttgtttggaatttttgaaaaatccaataaaaaatcggcagtgtgcgta
tttcaattttcagatattgaaaattcgatcaggaatgcccgaaaaacctgtttaagcgag
acgaattctggagacgtgtcggtgctggacagtgtaattcaagggactggagctggctgc
gttaagaagaatattgtgttgcagctggagcagttggactgtggggccgctcacctgcag
caccctctggctctccggaaacccctgaaggccagtccagtgttcgagtcgtctgggctg
accgctgtcgccgttgcaagtgtcaatgaccacaccattgtattcctgggtactgccact
gggaagctgcataagctcaacctgcttaaaaacttgaccttgggaagccagaattcaatc
caagtggcttctcgggaatctgtccatcacattatgagttttgaccccagtgataacaac
tacctatatctgatgacatcatatcagatgatccgcgttaaggtagcaaagtgtgatctg
tacagcacctgcaatcagtgtctaggagctgcggatgcatactgtggatggtgtaccctg
gagagcaggtgttctctgcaaagagattgtagagactggaagcaaccacacttctggatt
agcctgagtgaagggatcaacatgtgtccgtctatgactattacaccttcagaaatcaac
ttagcttctaccttcaaagatgtagggattttgatcaatggtagcgtccctgaccttcac
agaacaaaggtggagtgcgattatggaaatggggtttctacagaggccacaatatatgga
attgattctgcaccatcacaaattcactcctgcccatttttaccaaaggagaagtaccca
gaattcccaccgggtcaagatcacataaccatctgcactaccatcaaggtcaatggcatg
agcgttgtgtggggaaatatcactatttatgactgtgagaggactggaatgtttaatgca
aaaacagcatgtactagctgtctgaatgcaaagtggaaatgttactggaatgtgaagacc
tttgcctgtgtctctagtaatttggactctaaggacttgcttgaggattctgcattatgt
ccaaaactcatacctgatgctctggatccaatagcaactggaactactcaagacatcacc
ttctcactggccaacacgaagaccttgcagggtacaggtttacaatgttgctttggaagt
gatcagtgttctgaagtaagctgggttaacacaatcaccattgtctgccacaatgtaaaa
ctctatacaactgaagatagtcagcacatcccggtccacctgagattgaaggaacaccca
gataaattcattgacagtccaaaaccaatgagagtggaggtgtataactgcatgtcgggc
aacacagactgctcccagtgctgggggagagaggacctgggtcaccgctgtgtctggtgt
gagaacagctgcaggatgagaagcgagtgcaaggcagtgcaggagtcctgctccgctcca
gaaataagaaagattgagcccctgagtggcccgctggaggggggaaccctactcacaata
caaggaaggaacctgggccgcagattcagtgacatcacggtctccatccgaggtgtgggc
tgcaggccgctccaagacagatacattgtttcagaagtaattgtctgtgagaccgagaaa
gctccagcgatgttctccagcgtggtttctgtgatcgtgggtacagaagggaagtcgaag
gagacattttcttacttgaacccagaggtgacttccattgagccaaactttggtcccaaa
gctggaggaacaaaagtgatcatcagtggcaaaaacctggatgtgggatcaaggatacga
gtcctggtcaacgggacgaaagagtgtaccagtctgttacgcacacaggactcaattaag
tgcaccatgccagcagcactgctacccaagacagaaagtgtgcaggtgtgcatccagttt
gagagcaacccctgtcccagcagcagcaacagcaccatgtatacatacatggaaaaccca
gtcatatctgagatcagtccgaaaaccagccatatcagtggaggaaggatactcactttg
aaggggcaggagttcaatctgatccagaacatctccatggtggttttaaggatcgggaaa
gaaccagcaatctgtgcagttcagagtcctaccattatcacatgcccctccccagcagcc
tctaacagtactgaggagcagccggtaaagttttacatcaacggggtcctgtacacggga
gatggctcggccgtccacagaatgcctgactacgatgacgattcgcactctagcagcttc
tacatgcattactgcgaggacccgcacttctacatcgccaataaggagaagtggatcaag
caccatcacggggaacccctgacactggtcatcatgaaagcaaaaaactgtttggatctg
agaccagaggaatacaaagtgatgattggctccatcccctgtgagatcagctttaacaat
gagaaggtcttccactgcaccattaacggatccctgagctccaccgagaggcagcttcct
gtcatagtgcaggttgggaatttcaaagaggagatcgcgagggtgcacctgggaggcaac
gagatggctatcattgtgtccatagtcgtatgcagcatattactactggtctgtacagtg
gctttgggggtcttttgtactaaaagtcgcagagcagaacgatactggcagaagacctta
cttcagatggaagagatggaatctcagattcgtgacgaaatccgcaaaggttttgcagag
ttgcagactgacatgacagacctcaccaaagagctgaacagcagtcagggcattccgttc
ttggagtacaagcactttgttacacgcactttctttcccaagcagtgctctgactacgag
agaagctttgtgcaacccatctaccaaaaccaccctcaggctgctgtgaccccacaggaa
acccacccgctcctgcaggactggaagtcttctaacccagtgaaacccaacacggaggaa
ggaattgccttgttctccacactgctcaacaacaagcactttctcgtcacctttgtccat
gcactagaacagcagaaggattttgctgtaagagacaggtgtaacatagcttccctcctc
actgttgcactccatgagaagctggagtattacaccagcatcatgaaggagctcctggtg
gatctgatcgatgcatccgcctccaagaaccccaagctgatgttaaggaggaccgagtcg
gtggtggagaagatgcttaccaactggatgtccatctgcatgtacagctacctcaaggag
aaggtgggagagcccttcttcttgctgctatgtgccatcaggcagcagatcaataaggga
tccattgatgtcctcactgggaaggccaggtacaccctgaatgaagagtggctcctgcgt
gagaacattgaagccaagcccgtgaacattaatgtgtcattccaaggctttggcatggac
tccctgactgtcagagtcatgaacacagacaccatctgccaagtcaaagaaaaaatcctg
gaggctttttacaagaaccttcccttctcgcagtggccgagagcagaagatttagacctg
gagtggtttgcatccagcagtgacagccgtattcttcgggatctggatgataccacactt
atggaggatgggagaaagaaactgaacacagtgcttcattacaagattcctgaggaagcg
tctcttgccatcagcctaaaagacaagcgggacaacaccctgggaagagtcaaagacctg
gacacagaaaaatatttccatttggttcttccaaacgatgaactgatggagaacaagaaa
tcccaccggcagagccacaggaaaaaggttcttccagagatctacctgacacggctgctc
tccaccaaggggacactccagaagttcttggatgacctttttcacgctatcctcagcatc
cctgaagacaagcctccctttgctgtgaaatatttttttgattttcttgaggagcaggcc
gacaagaggggaatcacagaccctgacactttacacatctggaagactaatagtttacct
ctgcgcttctgggtgaacatcctgaagaacccccagtttgtgtttgacattgacaagaca
gatcacatggacgcgtgcctgtcagtcatagctcaggcttttatagacgcgtgttcaatc
tcagatctgcagctgggaaaggactcccctactaacaagctgctctacgctaaagagatc
ccagagtacaagaagacagtccagcagtattacaaacagatccaggaaatgatgccacta
agtgaacaggaaatgaatgcacacttagcagaggagtctaggaaatacagaaacgagttc
aacactaattcagctttggctgagatctacaagtatgccaagagataccagacacaggtt
gtgaatgcactggaagccaaccccacaacaaaacggatgcagctccagcacaagttccag
caggtgatagcgctggtggaggataacatttacgaatgttgcagtgaagcttga
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integrated database retrieval system
