KEGG   Polyodon spathula (Mississippi paddlefish): 121298119
Entry
121298119         CDS       T07273                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pspa03037]
    121298119 (ift122)
Cilium and associated proteins [BR:pspa03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   121298119 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Beta-prop_EML_2 Zn_ribbon_IFT122 Zn_ribbon_IFT122_C WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 WDR55 EIF3I Beta-prop_RIG_2nd Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 TPR_GEMI5 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st TPR_IF140-IFT172 TPR_IFT80_172 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st eIF2A TPR_COPA_B Beta-prop_WDR75_1st Beta-prop_IFT140_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 121298119
NCBI-ProteinID: XP_041080881
LinkDB
Position
23:12938946..12968879
AA seq 1188 aa
MRSVPTWIDKVHDRDKVEQCVNDLAFKPDGTQLIVAAGNRVLVYDTSDGTLIQPLKGHKE
TVYCVDYAKDGKRFASGSADKSIIIWTSKLEGILRYTHNDSIQCLAYNPVTHLLASCSSS
DFGLWKPEKKSVAKHKINSKITCCGWTNDGQYLAIGMMNGVVSIRNKNGEEKVKIERPGG
ALSPIWSIAWNPSKDEHNDILAVADWGQKLSFYQLSGKQIGKDRTLNYDPCCVSYFSKGE
YVVMGGSNNQVSLYTKDGVRLGTIGDQNSWVWSCKVKPNSSYVVVGCQDGTLAFYQLVFS
TVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYE
LYSDDSSDMHYRVKEKICKKFECNLLVVCSRHIILCQEKRLQCLSFSSVKEKEWLMESLI
RYIKVIGGSPGREGLLVGLKNGAILKIFVDNPFAITLLKQATSVRCLDMSSSRSKLAVVD
EHNTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGNGYLNIKASNFPVHQQKLQGF
VVGYNGSKIFCLHVYAMSAVEVPQSAPMYQYLERKMYKEAYQIACLGVTDSDWRELAMEA
LEGLDFETAKKAFIRIRDLRYLELINSIEERKKRGETNNELFLADVSAYQGKFHEAAKLY
KKTGNDPQALNMYTDLRMFEYAKDFLGSGDPKDTKMLITKQADWAQNINEPKAAAEMYLS
AGEHMKAIEIIGDNGWVDMLIDQARKLDKAEREPLSKCAAFFKKLQHHGYAAETYVKMGD
LKSLVLLHVETNHWDEAFEILEKHPQFKDDVYVPYAQWLAENDRFEEAQKAFHRAGRQGE
AVKVLEQLTHNAVVESRFNDASYYYWMLSMQCLDIARENEEKKDEMLKKFHKFQHLAELY
HVYHSIQRYTDEPFSSHLPETLFNISRFLLHNLTKDIPLGISKVNTLYALAKQSKALGAY
KLARHAYEKLQGHRIPARFQESLELGSLTARSKPFHDSEELVPMCYRCSTNNPLLNNQGN
VCINCRQPFIFSASSYEVLPLVQFYLEEGISDEEAVALIDLEAPRAEKKGDKWLEMNNDE
SQTLRLDESVDDTEEDPFTAKLSFEQGGSEFVPVVVNKSVLRSMSRRDVLIKRWPKPLQW
QYYRSLLPDVSITMCPSCFQMFHSEDYELLVLQHNCCPYCRRPIDEPN
NT seq 3567 nt   +upstreamnt  +downstreamnt
atgagatctgtgcccacctggatagataaagtccacgacagagacaaagtagagcaatgc
gtgaatgacctagcgttcaagcctgatggaacacagctaattgttgctgctgggaaccga
gttttggtttacgacacatcagatggaacccttattcagccactaaagggacataaagaa
acagtatattgtgtggactatgccaaagatgggaagcgttttgcttcaggatcagctgac
aagagcatcattatatggacatctaaactggaaggcatcttgagatatacacataatgat
tcaattcagtgtcttgcatataacccagttacacacctgctggcgtcatgctcctccagt
gactttggtttatggaaaccagaaaagaaatcagttgccaagcacaaaatcaacagtaaa
atcacctgctgcgggtggaccaatgatgggcagtaccttgctatcggcatgatgaatgga
gttgtgagcatcaggaataagaacggagaggagaaggtgaaaatcgaacgccctggaggt
gctctgtcccccatctggtccattgcctggaacccatcaaaagatgaacacaatgacatc
ctggcagtggcagactgggggcagaagctgtcgttctaccagcttagtggaaaacagatc
ggaaaagacagaactctgaattatgacccttgctgtgtcagctacttctcgaaaggggaa
tatgttgtgatgggcggctcaaataatcaggtttcgctttataccaaagacggggttcgt
ctcggcaccattggagatcagaattcctgggtctggtcgtgtaaggtgaaaccaaactct
agctacgtggtggtaggctgccaggatgggacccttgctttttaccagctggtctttagt
actgtccatggtctgtataaagatcgctatgcctatagggacagcatgacagatgtcatt
gtccagcatctcatcactgaacagaaggtgagaatcaaatgcagagaactggtaaagaaa
attgctatctacaaaaacagacttgcaatccagctaccagagaaaatcctgatttatgaa
ctgtattccgacgactcttcagacatgcattaccgcgtgaaagagaagatctgcaagaaa
ttcgagtgcaacctactggttgtgtgttcacggcatatcatcttgtgccaggaaaaaaga
ctgcagtgtttgtcctttagtagtgtaaaagagaaggagtggctaatggagtcattgatt
cggtacataaaggtgattggtggatctcctggaagggaaggacttctggttggcttgaag
aatggcgcgattctgaagatatttgtggacaacccctttgcgatcaccctgctgaagcag
gcaacctcagtgcgctgcctggacatgagctcctcgcgcagcaagctggctgtggtggac
gagcataacacctgccttgtgtatgacatccacaccaaggagctgctcttccaggaaccg
aatgcgaacagcgtggcatggaatacccaatgtgaggacatgctgtgtttctcaggcaac
ggatacctgaacatcaaagccagtaactttccagttcaccagcagaaactccagggcttt
gtggtggggtacaatggctccaagatcttctgcttgcatgtctacgcaatgtcagcagta
gaggtcccccagtctgctcccatgtaccagtacctggagaggaaaatgtataaagaagcc
tatcagatagcatgtctaggagtgactgacagtgactggagagaactggcaatggaggcc
ctggaaggactggatttcgaaactgcaaagaaggcatttatccgaattcgcgatctgcgc
tacttggagcttatcaacagtattgaggagaggaagaagcgtggagagaccaacaatgag
ctgttcctggcagatgtgtctgcctaccaggggaaatttcacgaggcagcgaaactctac
aagaagaccggcaatgaccctcaagctctcaacatgtatacagatctgcgcatgtttgag
tatgccaaggatttcctcggctctggagaccccaaggacaccaagatgttgattaccaaa
caagcggactgggctcagaacatcaacgagcccaaagcagcggcagagatgtacctttca
gctggggagcacatgaaagccatagaaatcatcggggataatggctgggtggatatgtta
attgatcaagcgcggaaactggacaaggcagagcgggaaccgttgtcaaagtgtgccgcc
ttcttcaagaaactgcagcaccacgggtatgctgcagagacttacgtgaagatgggagac
ctcaaatctctagtccttctgcatgtggaaacaaatcactgggatgaggcctttgaaatt
ttagagaagcacccccagttcaaagacgatgtgtatgtaccgtatgcacagtggctggca
gagaacgaccgctttgaagaagcccagaaagcgttccacagggctggtaggcagggcgag
gcagtgaaggtactcgagcagctcactcacaacgctgttgtggaaagcaggtttaatgac
gcatcttattactactggatgctgtcaatgcagtgtctggatatagcaagggaaaacgaa
gagaagaaagacgaaatgttaaagaaatttcacaagtttcagcacctggcagaactatac
cacgtttaccactccatccagagatacacggatgagcccttcagttcccatctaccagaa
acactcttcaacatctctagattcttgctgcacaaccttaccaaggatataccactgggg
atctccaaagtaaatactctgtatgctttggctaaacagagcaaagccttgggggcttat
aagctggcaagacatgcctatgagaagctgcagggccaccggatcccagcccgcttccag
gagtccttggagctgggcagcctgactgcacgctccaaacccttccatgacagcgaggag
cttgtaccaatgtgctatagatgctctactaacaacccgctactaaataatcaaggaaat
gtgtgcattaactgcagacagcctttcatcttctcagcctcgtcctatgaggtgctgcct
cttgtgcagttctacctggaagagggcatctctgatgaagaggctgtggctctcattgac
ctggaggcacccagggctgagaagaagggggacaaatggctggagatgaacaatgacgaa
tcccaaactttgagattggatgagagcgtagatgatactgaagaagatccattcactgca
aagctaagttttgagcaagggggctctgagtttgttcctgtggttgtgaacaagtccgtc
ctgcggtccatgagcaggagagacgttctcatcaagcgctggccaaagcccttgcagtgg
cagtattacagatccctgcttcctgatgtctccatcaccatgtgcccctcatgctttcag
atgttccacagtgaagactacgaactgctggtactgcagcacaactgctgcccatactgt
cgtagaccaatagatgagcccaactga

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