Polyodon spathula (Mississippi paddlefish): 121299280
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Entry
121299280 CDS
T07273
Name
(RefSeq) protein PML-like
KO
K10054
E3 SUMO-protein ligase PML [EC:2.3.2.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04144
Endocytosis
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121299280
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121299280
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121299280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121299280
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121299280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PML_CC
zf-B_box
ANCHR-like_BBOX
zf-RING_UBOX
zf-RING_5
zf-C3HC4
FapA
Motif
Other DBs
NCBI-GeneID:
121299280
NCBI-ProteinID:
XP_041082888
LinkDB
All DBs
Position
24:complement(7014947..7020120)
Genome browser
AA seq
515 aa
AA seq
DB search
MSLSSDTLQSYSQFLQCGACSCSITSPKLLSCLHSFCQTCLKDQDGSRVVTCPTCHQPTE
KAEVKDNKLLSDLQSKLDILRQIGRGGDLSCSCCNASAGSMCFECEKFLCQKCFEAHQVF
TAKDSHSVESLESLKQMGFQEFLATARKTRLPYCPDHDKQTISIFCRSCSKSICCTCTVL
AHKLHDYADIKLEAQLQKQDLTQMSTTLLEKDKEFTKICQDLMSLQDRSRHHKKELVEQI
KVSVKEALRKVEQKGDTLLEELESLYAVKEVEIKRRIVQMENVLRRIEASRGLVDNMITY
AAWKEVMEMQDFVKSALQQLQSEQPLNLDSEETTVRFIQTTKEPSELLGSLVVSNCRSAE
TEVEAPCESSAIPIACKREREEEWDPEQDTEPWISMETSLDAWSSRSHREGSAASTALAS
PVDHEESNTEPLGHDRGKKGTSLEEPILISSNESDDDYSSVRALVQNKKRTRKHKTPKKR
PESDGTRKTVPNKLKLIVKPCCSNMSECVTDPISP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcagttcagacacattgcaaagttacagccagttcctgcagtgtggtgcctgc
tcttgtagcatcacctcccccaagctgctctcctgcctgcacagcttctgtcagacatgt
ttgaaagatcaagacgggtctcgcgttgtcacctgccccacctgccaccagcccaccgag
aaggctgaggtgaaggacaacaagcttttatcggacctgcaaagcaaactggacatcctg
aggcagataggaaggggcggtgacctgtcctgctcttgctgtaatgcctcagcggggtcc
atgtgcttcgagtgcgagaagtttctgtgccagaagtgttttgaagcccaccaggtgttc
actgcgaaagacagtcactcagtggagagcttggagtccctgaaacagatgggcttccag
gaattcctggccactgctcggaagacgaggctgccctactgccccgaccacgacaaacag
acgatcagcatcttttgccgatcgtgttccaaatccatttgctgcacatgcacagtcctg
gcacacaagctacatgattatgctgacatcaagttggaggcccagctgcagaaacaggac
cttacccaaatgtccaccactctcttggaaaaagacaaagaattcaccaaaatctgccag
gacctcatgtctctacaggaccgcagtcggcaccataagaaggagctggtagaacagatc
aaagtgtcggtgaaagaagccttgaggaaggtggagcagaagggagacaccctcttggaa
gagctggagagcctttatgcagtcaaggaggttgagatcaagcgcaggatcgttcagatg
gagaatgttctgaggagaatcgaagccagcaggggtctggttgacaacatgatcacctac
gcagcttggaaagaagtgatggagatgcaggattttgtgaagtcggctctgcagcagctc
cagagtgaacaacccttaaacttggactcagaagaaaccacagtgcgatttatccaaacc
accaaggaaccaagtgaattattgggcagtttggtagtgagtaactgcagatctgcagaa
acagaagtggaagctccctgtgaatcgtctgccattccgatagcttgtaaaagggagagg
gaggaggaatgggatccagaacaagatacagaaccctggatcagcatggaaaccagtctg
gatgcatggtccagcaggtcccatagagaagggtctgctgctagcacagccctggcttct
ccagtggaccacgaagagtccaatacagaacctcttgggcacgacagagggaagaagggc
acttcacttgaggagcccatcttgatatcatctaatgaatcagatgatgactattcctcg
gtaagagcgctagtgcagaacaaaaagagaacaagaaaacacaaaacaccgaaaaaaaga
cctgaatccgatggaacgagaaaaacagttccaaacaagctaaaactgatcgtcaagccg
tgttgttctaacatgtctgaatgtgttacagaccctatttctccataa
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