Polyodon spathula (Mississippi paddlefish): 121299323
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Entry
121299323 CDS
T07273
Name
(RefSeq) NT-3 growth factor receptor-like isoform X1
KO
K05101
neurotrophic tyrosine kinase, receptor type 3 [EC:
2.7.10.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121299323
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pspa01001
]
121299323
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121299323
Protein kinases [BR:
pspa01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
121299323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRRCT_2
Ig_3
I-set
ig
Ig_2
C2-set_2
LRR_8
LRR_5
TrkA_TMD
Haspin_kinase
LRR_4
Motif
Other DBs
NCBI-GeneID:
121299323
NCBI-ProteinID:
XP_041082940
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Position
24:complement(17518547..17601403)
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AA seq
839 aa
AA seq
DB search
MDLSFCTPPICWWRVLFLLNIFQHYLSSVLDCPPTCSCSLMEIYCNKSDSVKFFPLLEVQ
DPGNNGNSSTITELFKNISSIHIENWRGLQTLNSVDMELYTGLQRLTIINSGLRSILPRA
FGKNPHLRYINLSRNPLSTLSWQLFQTLQLSELRLDNILFNCSCDIRWVQLWQQRGEAGL
HTQQLFCKTGESEVIPLQDMNITLCDLPEISVSHSNLTVMEGESVVVTCNGSGSPLPDVD
WIVTGLHSINTHQTNVNWPNVHSINLTLFNISWEDNGFQLTCIAENVVGITNSTVLLSVQ
YPPHIVKLVEPERRHDTCVEFIVRGNPPPELRWLHNGVEIGDNGYIYTDKGDYQDYQEGC
LIFINPTHYNNGNYTLEAWNGLGFVNDTIYAHFLHAPFEETEDPMYSVTPTPPISVTHKP
EEDTFGVSIAVGLAGFACVLLVVLFVLINKYGRRSKFGMKGPVAVISGDEDSASPLHHVN
HGIMAPCTLDAGSDAVVIGMTRIPVIENPQYFRHGHNCTKPATYVQHIKRRDIVLKRELG
EGAFGKVFLAECYNLSPTKEKMLVAVKVPGSAYYQPLIEMGPHFPQTLKDPTISARKDFQ
REAELLTNLQHEHIVKFYGVCVDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQAHQ
AQGQLGLSQMLHVATQISSGMVYLASQHFVHRDLATRNCLVGNNLLVKIGDFGMSRDIYS
TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLANNEVI
ECITQGRVLERPRVCPKEVYDLMLGCWQREPQQRLNIKDIQKILYALGKATPVYLDILG
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggatctatcgttctgtacaccaccaatttgttggtggagggttttgtttctcctgaac
atttttcagcactacctgagctctgttctggactgcccgccgacctgcagctgctcgtta
atggagatatattgcaataagtctgacagcgtgaaatttttccctctgcttgaggtgcaa
gacccggggaacaatggtaacagcagcaccattaccgagctgttcaagaacatcagctcc
atacacattgagaactggagaggtctccagacactgaattcagtggacatggagctctac
actggacttcaaagactcaccatcataaactcaggccttcgaagcatactgccacgagcc
tttggcaagaatccacatctgcgctatataaatctttccagaaacccgctgagcaccctg
tcatggcagctcttccagacactgcaactctctgagctgaggctggataacatcctgttc
aactgcagctgtgacattcgctgggtgcagctgtggcagcagcgaggggaggctgggctg
cacacccagcagctgttctgtaagactggggagtcggaggtgattccactccaggacatg
aacatcacactgtgtgacctaccagagatcagtgtgagccacagtaacctgacggtcatg
gagggggagagcgtggtggtcacctgtaatggctcggggtcccccttgcccgacgtcgac
tggattgtcacaggccttcactccataaacacacaccagaccaacgtgaactggccgaat
gttcactccatcaacctgactctgttcaatatcagctgggaggacaacggctttcagttg
acctgcatcgcggagaatgtggtggggataaccaactccactgtcctgctgtccgttcag
taccccccacacatcgtgaagctggtggagcctgagcgcagacacgacacatgcgtggaa
ttcattgtgcgcgggaaccctcctccagagctacgctggctgcacaatggagtggagatc
ggggacaatggatacatctacactgacaagggagactaccaggactaccaggagggctgc
ctgatcttcataaaccccacacactacaacaacggcaactacaccctggaggcatggaac
gggctgggctttgtcaacgacactatctatgcacacttcctgcacgcccccttcgaggaa
accgaagaccccatgtattctgttacccccacgcctcctatcagtgtgactcacaagcca
gaagaggacacttttggggtctcgattgcagtcggcctggccggattcgcctgcgtcctt
cttgtggtgctcttcgtcctcatcaacaaatatggacgccgctccaagtttggaatgaaa
ggaccagtggcagtcattagtggggatgaagactcagccagcccacttcatcatgtaaat
cacggcatcatggctccctgcacactggacgcaggatctgacgctgtggttatcggaatg
acccgcatccctgtcattgagaatccacagtacttccggcacggccacaactgcaccaaa
cctgccacctacgtgcagcacatcaagcgcagagacatcgtgctgaagcgagagctcggg
gaaggggcctttggaaaggtcttcctggcagaatgctacaacctgtcccccacgaaggag
aagatgttagtggctgtcaaggttcctggatccgcctactatcagccattaattgagatg
ggaccccactttccacagacactgaaggacccgacgatctctgcacggaaggatttccag
cgggaagccgagctcctgaccaacctgcagcatgaacacatagtgaagttctacggggtg
tgtgtggacggggaccccctcatcatggtgttcgagtacatgaaacacggagacctcaac
aaattcctcagagcccacgggccggacgcaatgatcctggtggatgggcaggctcaccag
gctcaggggcagctgggcttgtctcagatgctgcacgtcgccacacagatctcctcaggg
atggtatacctggcctcccagcactttgtccaccgtgacttggccaccagaaactgcctg
gtgggcaacaacctgctggtgaagatcggggacttcggcatgtcccgggacatctacagc
accgactactacagggtggggggccacacaatgctaccaatccgctggatgcccccagaa
agcatcatgtaccgcaagttcaccacggagagcgacgtgtggagttttggagtcatcctc
tgggagattttcacctatgggaagcagccctggttccaactcgctaacaacgaggtaatc
gagtgcatcacgcaaggtcgggtgctggagaggcctcgggtgtgcccaaaggaggtttac
gacttgatgttggggtgctggcagagggaaccacagcagcgactaaacatcaaggacatc
cagaagatcctgtacgcgttgggcaaggccacgccagtctacctggacattctgggctag
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