Polyodon spathula (Mississippi paddlefish): 121299721
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Entry
121299721 CDS
T07273
Name
(RefSeq) AP-4 complex subunit beta-1-like
KO
K12401
AP-4 complex subunit beta-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121299721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121299721
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Others
AP-4 complex
121299721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
PDS5
Motif
Other DBs
NCBI-GeneID:
121299721
NCBI-ProteinID:
XP_041083627
LinkDB
All DBs
Position
25:1354276..1360359
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AA seq
752 aa
AA seq
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MPYLGSAETVKELKRALSNPNVQSDRLRYRSVIVRVIRFMTQGLDMAPLFMEMVNASATV
DIVQKKLVYLYMCSYAPLKPDLALLAINTLLKDCADPNPMVRGLALRNMCNLRVPSVSEY
AQQPILSGLRDKASYVRRAAVLGCAKMHSLQPDAEIDGAVVNELYGLLRDQDPVVMVNCL
RALEEILKKEGGVVINKPIAHHLLNRMKDLDVWGQSEVLTFLLRYRPRCHSELFDILNLL
DSFLESGHSGVVAATTRLFLSLGAALPAVQSGVLERARGPLLAACTAQSRELRFVALCHV
QQVLRSLPGHFGAHYKKFFCSYSEPSYIKFRKMEILVELVNDENVGMLLEELRGYCTDVS
PELAQAAIFAIGRVGQTYSEKCLSILTGLLELKQEQITSAVVQTFRDQVWLRPQCSESVC
AAIAGCEEHIQDSEGKQALVWLLGVHGEQIPGAPYVLEEFIDSLKTEQSPAVKLELLTAT
VRLFLSRPAETQDVLGRLLTFCIEEECDMSVRDRALFCYRLLQCGVEEARRVLGGPKSDP
SLGLIAGRPEEPINSWAGDFNTLAPVYSRGDWAALTATTGGSPSLLPQVTGGAAQADPGS
VEDAEAVDSAAAAAAHSPPDPGEELCLVSGPPLSPELFERRWLALEPSRRVSLGWPGGDC
LPETLQAALQLVNIQALALSRLHARPWKAYLYAHSLGTVLLAELLWDPDADGLQVTVKQD
PEREEALSSFLTVLKTVIQTLGNSSASLASHD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgccctacctgggctcggcggagacggtgaaggagttgaaaagggctctctccaacccc
aacgtccagtctgaccggctgcgatacaggagtgtcattgtcagggttatcaggttcatg
acacaaggactggacatggcccctctctttatggagatggtgaatgccagcgccacagtt
gacatcgtgcagaagaagctggtctacctctacatgtgctcatacgcccctctgaagcca
gacctggccttgctggccatcaacaccctgctcaaggactgtgctgaccccaaccccatg
gtgcgcggcctggccctgcgcaacatgtgcaacctcagagtgcccagtgtcagcgagtac
gcccagcagcccattctgtcggggctgagggacaaggcctcctacgtgcgtcgagccgcg
gtgctcggctgtgccaagatgcacagtctgcagcctgatgctgaaatcgatggcgctgtc
gtgaatgagctgtatggcctgctgcgagaccaggaccccgttgtcatggtgaactgcctg
agggccctcgaggaaatcctgaaaaaggaaggaggcgtggtcatcaacaagccaatcgcc
catcacctgctcaacaggatgaaggacctggacgtgtggggtcagagcgaggtgctgacc
ttcctcctccgctaccggccgcgctgccactccgagctcttcgacatcctcaacctgctg
gacagcttcctggagagcgggcacagcggcgtcgtcgcggcgaccacccgcctcttcctg
agcctgggcgccgccctcccggcggtgcagtccggcgtgctggagcgggcgcggggtccc
ctgctggctgcctgcaccgctcagtcccgcgagctgcgcttcgtggcgctctgccacgtg
cagcaggtcttgcgcagcctgccagggcacttcggagcgcactacaagaagttcttctgc
agctactcggagcccagctacatcaagttccgcaagatggagatcctggtggagctggtg
aatgatgagaacgtggggatgctgctggaggagctgagggggtactgcactgatgtctcc
cccgagctggcacaggctgccatcttcgccatcgggcgagttggacaaacatacagtgag
aaatgcctgagcatcctgactgggcttctggaactgaaacaagagcagatcacttcggct
gttgtccagacgttccgggaccaggtctggctgcgtccgcagtgcagcgagtctgtgtgc
gctgccatcgcaggctgtgaggagcacatccaggacagcgagggaaagcaggccctggtc
tggctgctgggggtgcatggcgagcagatccccggcgccccctacgtgctggaggagttc
attgactccctgaagacagagcagtccccagcggtgaagctggagctgctgaccgccact
gtgcgtctcttcctgtcccgtccagctgagacccaggacgtgctgggacgcctgctcacc
ttctgcattgaggaggagtgtgatatgtctgtgcgggaccgggccctgttctgttaccgg
ctgctgcagtgtggagtggaggaggctcgcagggtgctgggcggccccaaatcagacccc
tcgctggggctgatcgcaggccggcccgaggagcccatcaacagctgggcaggggacttc
aacacactggcacctgtctacagccggggggattgggcagcacttactgccaccaccggg
gggagcccttcgctattaccccaggtgactgggggagcagcacaagcagaccctgggagt
gtcgaggatgcagaagcagttgattcagcagcagcagcagcagcacactcccccccagac
cccggtgaagagctctgcctggtctcggggcctcctctgtccccagaactcttcgaaaga
cgctggctggctctggagccctctcgcagggtctcgctgggctggccgggcggtgactgt
ctcccggagacgctacaggccgcgctgcagctcgtcaacatccaggccctggctctgagc
aggctccacgcacggccctggaaggcctacctgtacgcacacagcctgggcacggtgctg
ctggcagagctgctttgggacccagacgctgacgggctgcaggtgaccgtgaagcaggac
ccagagcgagaggaggcactcagcagctttcttacagtgctgaagactgtcatacaaaca
ctgggaaacagcagcgcttccctagcaagtcatgactga
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