Polyodon spathula (Mississippi paddlefish): 121300559
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Entry
121300559 CDS
T07273
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10375
tropomyosin 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04814
Motor proteins
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121300559
04820 Cytoskeleton in muscle cells
121300559
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121300559
04261 Adrenergic signaling in cardiomyocytes
121300559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121300559
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
121300559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
ATG16
SNARE
Crescentin
DUF3450
MscS_porin
ERM_helical
TMF_DNA_bd
ADIP
Exonuc_VII_L
Laminin_I
HrpB7
CENP-F_leu_zip
FPP
Fez1
DUF4200
XhlA
EzrA
Motif
Other DBs
NCBI-GeneID:
121300559
NCBI-ProteinID:
XP_041085063
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Position
26:18710147..18730115
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AA seq
284 aa
AA seq
DB search
MEAIKKKMQMLKVDKENAIDRAEQAESDKKAAEDKSKQLEDELVSLQKKLKSAEDELDKY
SESLKDAQEKLELSEKKAADAEGDVAGLNRRIQLVEEELDRAQERLATALQKLEEAEKSA
DESERGMKVIENRAMKDEEKMEMQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEISELKCSELEEELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKVLSDKLKEAETRAE
FAERTVAKLEKTIDDLEEKLSSAKEENLGMHQVLDQTLQELNSL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatcaagaagaagatgcagatgctgaaggtggacaaggagaatgccatcgac
agggcagaacaggcagagtccgacaagaaggcagcggaggacaagagcaaacagctggag
gatgagctcgtcagcctgcagaagaagctcaaaagcgcggaagacgagctggacaaatac
tcagagtcgctgaaggacgctcaggagaaactggaactgtccgagaagaaagccgcggat
gctgagggagatgtagctggactgaaccgtcgtatccagctggtggaggaggagctggac
cgagcccaggagcgcctggccactgccctgcagaaactggaggaggctgagaagtcagcg
gacgagagtgagcgagggatgaaggtgattgagaacagagccatgaaggacgaggagaag
atggagatgcaggagatgcagctgaaggaagccaagcacatcgctgaggaggctgaccgc
aaatacgaggaggttgcacggaaactggttattctggagggtgagctggagcgagccgag
gagagagcagagatctcggaactgaagtgcagtgaattggaagaagaattgaaaaacgtc
accaataacctgaagtctctggaagcccagtctgagaagtactctgaaaaggaggacaaa
tatgaagaggaaatcaaggttctcagcgacaagctgaaagaggctgaaacccgggctgag
tttgctgaaaggaccgtcgccaaattggaaaagaccatcgatgatctggaagaaaaactg
tcaagtgccaaagaggagaacttgggaatgcatcaagttctggatcaaactctgcaagaa
ctcaacagcttataa
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