KEGG   Polyodon spathula (Mississippi paddlefish): 121300559
Entry
121300559         CDS       T07273                                 
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10375  tropomyosin 4
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04260  Cardiac muscle contraction
pspa04261  Adrenergic signaling in cardiomyocytes
pspa04814  Motor proteins
pspa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    121300559
   04820 Cytoskeleton in muscle cells
    121300559
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    121300559
   04261 Adrenergic signaling in cardiomyocytes
    121300559
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pspa04812]
    121300559
Cytoskeleton proteins [BR:pspa04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     121300559
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ ATG16 SNARE Crescentin DUF3450 MscS_porin ERM_helical TMF_DNA_bd ADIP Exonuc_VII_L Laminin_I HrpB7 CENP-F_leu_zip FPP Fez1 DUF4200 XhlA EzrA
Other DBs
NCBI-GeneID: 121300559
NCBI-ProteinID: XP_041085063
LinkDB
Position
26:18710147..18730115
AA seq 284 aa
MEAIKKKMQMLKVDKENAIDRAEQAESDKKAAEDKSKQLEDELVSLQKKLKSAEDELDKY
SESLKDAQEKLELSEKKAADAEGDVAGLNRRIQLVEEELDRAQERLATALQKLEEAEKSA
DESERGMKVIENRAMKDEEKMEMQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEISELKCSELEEELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKVLSDKLKEAETRAE
FAERTVAKLEKTIDDLEEKLSSAKEENLGMHQVLDQTLQELNSL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaagccatcaagaagaagatgcagatgctgaaggtggacaaggagaatgccatcgac
agggcagaacaggcagagtccgacaagaaggcagcggaggacaagagcaaacagctggag
gatgagctcgtcagcctgcagaagaagctcaaaagcgcggaagacgagctggacaaatac
tcagagtcgctgaaggacgctcaggagaaactggaactgtccgagaagaaagccgcggat
gctgagggagatgtagctggactgaaccgtcgtatccagctggtggaggaggagctggac
cgagcccaggagcgcctggccactgccctgcagaaactggaggaggctgagaagtcagcg
gacgagagtgagcgagggatgaaggtgattgagaacagagccatgaaggacgaggagaag
atggagatgcaggagatgcagctgaaggaagccaagcacatcgctgaggaggctgaccgc
aaatacgaggaggttgcacggaaactggttattctggagggtgagctggagcgagccgag
gagagagcagagatctcggaactgaagtgcagtgaattggaagaagaattgaaaaacgtc
accaataacctgaagtctctggaagcccagtctgagaagtactctgaaaaggaggacaaa
tatgaagaggaaatcaaggttctcagcgacaagctgaaagaggctgaaacccgggctgag
tttgctgaaaggaccgtcgccaaattggaaaagaccatcgatgatctggaagaaaaactg
tcaagtgccaaagaggagaacttgggaatgcatcaagttctggatcaaactctgcaagaa
ctcaacagcttataa

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