KEGG   Polyodon spathula (Mississippi paddlefish): 121302361
Entry
121302361         CDS       T07273                                 
Name
(RefSeq) lysine-specific demethylase 2A-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    121302361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pspa03000]
    121302361
   04121 Ubiquitin system [BR:pspa04121]
    121302361
   03036 Chromosome and associated proteins [BR:pspa03036]
    121302361
Enzymes [BR:pspa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     121302361
Transcription factors [BR:pspa03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    121302361
Ubiquitin system [BR:pspa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     121302361
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121302361
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     121302361
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC DUF7885 F-box
Other DBs
NCBI-GeneID: 121302361
NCBI-ProteinID: XP_041088221
LinkDB
Position
29:1947026..1965275
AA seq 1296 aa
MDSEGAKVRYSKRLRSGTRRRYQDDGISDDEIEGKRTFDLEEKLISSNYNANFIKVMEGK
DLDFKYIQREGLRDPLIFMKPDGLGIKMPDSDFGVNDVKHFVGSRRMIDVMDVSTQKGIE
MSMSQWRRYYETPPEDREKLYNVISLEFSHTRLENLVQRPASVDLIDWVDNMWPRHLKDR
QRDSTNAIFDMKYPKVQKYCLMSVQGCYTDFHIDFGGTSVWYHIHKGGKVFWVIPPTPQN
LELYENWVLSGKQGDIFLGDKVSGCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFL
HSFNIPMQLHIYNIEDRTRVPAKFRYPFYYEMCWYVLERYLYSLTSKSYLTKEFQRESLG
IGLESEMNGAIKKEEEEEKEECGGSGNKNGGDDGECARALSRPPGEGGGGEAGGEKGGGK
ARAQLTPFELEGLWNLVGKLESLPPHKKCIPAGIEDPQSLLSDLKDLLEQQSGSDPELSY
TGVPIVKWPKRPPSLLPPASVGRPRLYPSSQQAGGRAPRQGPRGVVSASLRRRRVRCKKC
AACLRRECGSCNYCRDMKKNGGPGRMKQSCMLRQCLSPGLPLSSVCVVCEEGSQDLDDTH
DVSRVLMECSDCSEIAHPGCIKVPGEGVLNKDLPNCWRCPKCCLEEADSQSESSECSTAS
AGSLSLSPASQVSSLRERRQLRGAGNCAPNPRSTSRTPRSPACATPHTQRQRRHTQAAQR
YKDCLQQQQQRKRRLQSNHAAALELRLRKRIKLEREKILLQAKRKSVDGSVAQSKMKILR
SLRSREDSMDGAGPGGRSRISQGSAASSVSTRSGRGVSTRSSHGREAGPGGGARRRRGSA
ATGAPRRSSREGVERSENLSLRGARFRRRQQQQQQQQHSTGRLRRSRVTSPSSSSSSSSS
SSSSSSSSTSSKRQGKENQPGRREGSPSPLAGDPQSEGEVEAREGLTLAASTESEEEEQL
ARIKGSFLTVTLQRAPKTPSNGSPLSPSPSSSIVPRLQAIAQRSPRARPRPQCNGEPSRT
AGGAVDRDLGMQKEVWMSVFRLLSRRELCDCMLVCKAWHRWGCDKKLWMKIDLSRCRSIS
PQALSGIIKRQPVTLDLSWTHISKKQLTWLINRLPGLKDLILAGCTWSSVSALSSSSCPL
LRTLDLRWAEGVKDSQIRDLLSPPGPDNRSKLRSMVSFRLAGLDLTDATLRLIIRHMPLL
ARLDISHCSQVTDQSINLLTAVGSSTRTSLTDINLAGCHKLTDACLGFLKRIPHISTIDL
RGCKGISRKGCETLTSDLNLRAPYCLSEDNFIQRLS
NT seq 3891 nt   +upstreamnt  +downstreamnt
atggactcggagggggcgaaagtgcgctacagcaagagactgcgttctggcactaggagg
cgctatcaggacgatggaatctcggacgacgagattgagggcaagaggacctttgacctg
gaagagaaactgatcagcagcaactacaacgccaacttcatcaaggtcatggagggcaaa
gatttggacttcaagtacattcagagggaagggctccgtgatcctttgatattcatgaag
cccgatggacttggaatcaagatgccagactctgactttggtgtgaacgacgtgaagcac
tttgttgggagcaggcggatgatcgatgtgatggatgtctccactcagaaggggatcgag
atgtcgatgagtcagtggcgccggtactacgagaccccgccggaggacagagagaagctc
tacaacgtcatcagcctggagttcagccacacgcgtctggagaacctggtgcagagacca
gccagcgtggacctgatcgactgggtggataacatgtggccccgacacctgaaggacaga
cagagggactcgaccaacgccatcttcgacatgaaataccccaaagttcagaagtattgt
ttgatgagtgtccagggctgctacacggacttccacatcgacttcggggggacctccgtc
tggtaccacattcacaagggcggaaaggttttctgggtcatccctcccacccctcagaat
ttggagctgtacgaaaactgggtgctgtcgggaaagcagggagacatcttcctgggagac
aaggtctcggggtgccagcgcatcgagctgaaacaggggtacaccttcatgatcccttca
ggctggatccacgcagtgtacactccggaggacacactggttttcggggggaactttctg
cacagcttcaacatccctatgcagctccacatctacaatatagaagacaggacccgggtc
cctgctaagttccgctaccccttctactatgagatgtgctggtacgtgctggagagatac
ctctacagcctgaccagcaagtcatacctcaccaaagagttccagagagagtccctgggc
atcggtctggaatctgagatgaatggagcaatcaaaaaggaggaggaggaggagaaggaa
gagtgtggagggagtggaaataaaaacgggggtgacgacggcgagtgtgcccgggcactg
tctcgccctccgggggaggggggagggggagaggcaggaggggagaaaggaggggggaag
gcgagggctcagctcactccctttgaactggaggggctctggaacctggtgggcaaactg
gagtctctgcctccccacaagaagtgcattccagcgggcatcgaggacccgcagtcactg
ctgagcgatctgaaggacctccttgagcagcagagtggttctgatccagagctgtcctac
actggggtcccaattgtcaagtggcccaagaggcccccctctctgctcccccctgcctca
gtggggcgccccaggctgtacccctcctctcagcaggcggggggccgggccccgcggcag
ggtcctcggggtgtggtgtccgcctcgctgcggcgcaggagggtgcgttgtaagaagtgt
gcggcgtgtttgaggagggagtgcggttcctgcaactactgcagagacatgaagaagaac
gggggtccgggcagaatgaagcagagctgcatgctgaggcagtgtctctctcctggtctc
cccctctcctctgtctgtgtggtgtgtgaggaggggtcccaggacctcgatgacactcac
gatgtctctcgcgtcctgatggagtgctccgactgcagcgagatcgcgcaccccggctgc
ataaaggtcccgggtgaaggggtgctgaataaggacctaccgaattgctggaggtgtccc
aaatgctgcctggaggaggcagacagccagtctgagtcctctgaatgcagcactgcctct
gccggctctctctccctctcgcccgcctctcaggtctccagcctccgtgagaggcggcag
ctccgaggagcagggaactgcgccccgaaccccaggagtacctcccgcacgccccgctcc
cccgcctgcgccaccccgcacacccagaggcagcgcagacacacgcaggcagctcagcgt
tacaaggactgcctgcaacagcagcagcagcgcaagaggagactgcagagcaaccacgca
gctgcactggagctgcggctcaggaagaggattaaactggaacgggagaagattttactt
caagctaagaggaaatctgtggatggttcagtagcacaatccaaaatgaagatcttacgc
tctctgagaagcagagaggactcgatggacggagccgggccagggggccggagtagaatc
tcccagggttccgccgcctcctcggtctccaccaggagtgggcggggcgtgtccacgcgc
tcctcccatgggagagaggcggggcctgggggcggggccaggaggaggcggggctctgcg
gcgacgggagccccacgcaggagcagcagagagggggtggagaggagcgaaaacctgagc
ctgcgaggagcgagattcaggagaaggcagcagcagcagcagcagcagcagcactccact
ggcagactccgtcgctccagagtcacctctccctcctcctcgtcctcctcctcctcctcc
tcctcctcttcttcttcttcctccacttcctcaaagcggcagggcaaagagaaccagccg
ggccggagggagggctccccgtcccccctcgcaggcgacccccagtccgagggggaggtg
gaggcgagggagggtctcaccctggcggcgtcgacggagagcgaggaagaggagcagctg
gcgcggatcaagggctccttcctcacggtcaccctccagcgggctcccaaaacgcccagc
aacggctcccccctctccccctccccctcgtcctccatcgtcccccggctgcaggccatc
gcccagcgctccccccgggccaggccgcggccccagtgcaacggggagccctccaggaca
gcagggggcgctgtggacagggacctgggcatgcagaaggaggtgtggatgtcggtgttc
aggctgctgagccgcagagagctgtgtgattgcatgctggtgtgcaaggcctggcaccgg
tggggctgtgataagaagctgtggatgaagattgatctcagccgctgtcggtcgatcagt
ccccaggctctgagcggcatcatcaagaggcagccagtcaccctggacctgagctggact
cacatctccaagaaacagctcacctggctaatcaacagactgccagggctgaaggatctc
atcctggctggctgcacctggtcctcggtctctgctctcagctcctccagctgccccctg
ctccggacattggatctgaggtgggccgagggggtcaaggactcccaaatcagagacctg
ctgtcccccccaggccctgataaccgcagtaagctgcgcagcatggtctcgttccggctg
gctggcctcgacctcacggacgccacgctgcggctcatcatcaggcacatgcccctgttg
gccaggctggacatcagccactgcagccaggtcaccgaccagtccatcaacctgctgacc
gccgtggggtcttcaaccaggacctcgctgaccgacatcaacctcgcgggctgccacaaa
ctgacagacgcctgcctggggttcctgaaacgcatccctcacatctccaccatcgacctg
cgcggctgcaaaggcatctccaggaagggctgcgagaccctgacctccgatctgaacctc
agagccccatactgcctgagcgaagacaacttcatacagagactgagctga

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