Polyodon spathula (Mississippi paddlefish): 121302382
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Entry
121302382 CDS
T07273
Name
(RefSeq) nectin-4-like
KO
K06593
poliovirus receptor-related 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121302382
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121302382
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121302382
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Nectin family
121302382
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
Ig_2
I-set
ig
C2-set_2
TMEM51
Ig_CD22
DUF6377
YbhQ
Rv3627c_N
SID-1_RNA_chan
Insulin_TMD
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
121302382
NCBI-ProteinID:
XP_041088250
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Position
29:505667..522093
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AA seq
625 aa
AA seq
DB search
MGFKMHGIAFCRCPPGFLICIVLMVSPAPSLCGFLEPPTPVFSLSALEEGVARLPCRFEP
KSETQTNGTKEVVQQVAWFKVPPENEGAANREQIILFHTTMGQHVFDPYKDRVSFEKTQP
IADSALLIRGVTLEDQGNYVCQVITFPSGNFETTIKLSLLSLPVSSLDPASPPLVEGSAL
AVAAVCTSWGVVPPTVAWETGLEGSSQLNQAAGGKVTNKFWVKPSRGMNGEKLDCLITHQ
SLSEPRRIPYTVVVHYPPDVSLTGYENDWFVGMEEGALKCVGKGNPEPNHFTWTRRDSAL
PDGVSVVNGSLSFPRPLELSDSGVYICRSSNRAGFGEAKLEIRVSESAIRKANSSSVMMI
AVGAVVAVLLVTLVIAVLLLNRHHKRRNMELERALNMKTEELSSLSRQTSFRRLNSINTD
PRSQTDESIPLREEVVASQSPSSLADNSARSRDSRSTLSTVRGVSEFPGHPPLHRDDEME
EDEEARSSRLRVESFVRSSTRSLREPGFRPPLNPSLLRTHLTRSLPRSLPRSLPRERTNG
SARHLTERKLWDSSLGSQGEESQERDESYDELSEDGERGRQGEGVEMERECITEALSQHF
HMDNGTLQPKPTSNGIFIHPKAHFV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaaaatgcacggaatcgctttctgtcggtgcccgccggggtttctgatctgc
atcgtgttgatggtatcgcccgccccttctctctgcggtttcttggagccccccacccct
gtgttctccctcagcgctctggaagaaggggtagctcgtctgccctgtcgattcgaaccc
aagtcagaaacgcagacaaacggcacgaaggaggtggtgcaacaggtggcctggttcaaa
gtaccccccgaaaacgagggcgctgcgaatcgagagcagatcatcctctttcacacaacg
atgggacaacacgttttcgacccttacaaagacagagtctccttcgagaagacacagcct
attgcagactccgccctgttgatcagaggcgtgactctggaagatcaggggaactacgtg
tgtcaggtgatcactttcccatcgggaaacttcgagactaccatcaagctgagtctgctg
agccttccggtctccagccttgatcccgcctccccacctctcgtggaaggttccgcgctc
gccgtggcggcggtatgcacttcctggggggtcgtgccccccacggttgcctgggagacg
ggcctggaagggtcaagccagcttaatcaagcagccgggggcaaagtgacaaacaagttc
tgggtgaagcccagtcgagggatgaacggagagaagctggactgcttgatcactcaccag
agtctcagcgaaccgaggaggatcccctacaccgtcgtggtgcactatcccccggacgtg
tcgttgacaggctacgaaaatgattggttcgtcgggatggaagagggggctttgaaatgc
gtggggaaagggaacccagaaccaaaccacttcacatggacaaggagggactcggctctc
ccggatggagtgagtgtggttaacggctctctctcgttccctcgccctctggagctctcc
gactcgggtgtctatatctgccgctcgtcaaacagagctggcttcggggaggcgaagctg
gagatccgagtgtcagagtcggcaataaggaaagccaattccagctctgtgatgatgatc
gccgtgggagcggttgtcgcggtgttgctggttaccttggtgatcgccgtgctgttgctc
aatcgacatcacaagcgaaggaacatggagctggagagggcattgaacatgaaaactgag
gagctctcttccttatccagacaaacatctttcagaagactgaactctatcaacaccgac
ccccggtctcagacggacgaaagcatcccgctgcgagaagaagtcgtcgcgagccagagc
cccagctctctagcggataattccgctcgtagtcgggacagccgctccaccctgtcgacg
gtgcggggggtgtcagagttcccgggccaccctcccctgcaccgggacgatgagatggag
gaggacgaggaagcccgcagctccaggctgagagtcgagtcgtttgtcaggagcagcacc
aggtcactgcgggagcctggattccgcccccctctgaacccctcccttctgagaacccac
ctcacccgctccctgccccgctccctgccccgctccctgccccgcgagagaaccaacggc
agcgcccggcacctgaccgaaaggaaactctgggactcctcactgggatcccagggggag
gaatctcaagagcgggacgagtcctacgatgagctgagcgaggacggggaaagagggaga
cagggagagggggtagagatggagagagagtgcattaccgaagccctttcccagcacttc
cacatggacaacgggacgctccaaccgaagccgacctccaacgggattttcatccatccc
aaggcgcattttgtgtga
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