KEGG   Polyodon spathula (Mississippi paddlefish): 121303025
Entry
121303025         CDS       T07273                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121303025 (ercc6l2)
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    121303025 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 VIGSSK ERCC3_RAD25_C SMN_Tudor HIPIP
Other DBs
NCBI-GeneID: 121303025
NCBI-ProteinID: XP_041089357
LinkDB
Position
2:complement(88136427..88179228)
AA seq 1540 aa
MESESQSDSDSGTEERWCEGDRCLALYSGDGKLYEARIKTLVLEEHGKAVAVVKFVGFDE
EAVSVKKLQKIKCPQSHKRSFMFDDEDLEKPFFHDRKPPGPAVPCMLSEHGECIPYTINR
YLRDYQREGVKFIYSHYVKGRGCILGDDMGLGKTVQVISFLAAVLHKKGTREDIENNMPE
FLCKKKESRPIEAKKIFLIVAPLSVLYNWKDELDTWGYFRGTILHGTKKEAEFARLKRGK
CEFALTTYETLRLCLSDFNSIKWSAVIVDEAHKIKNPNSQITQAMKALKCNVRVGLTGTI
LQNNTEELWCVMDWAIPGCLGSLNLFKEKFSVPIEHGQKHGVTKRNLAMGRKAIRRLARK
LSCWFLRRTKSLISCQLPKKDDRVVYCSLTEFQQAVYRAVLESEDVNLLLHSCEPCSCNS
GLQRKSCCYKKNKDGVPMRALYFSYLMILRKVANHAALLQSKGNTSKAQEVYVNQVCMQV
FNKFPDFVQQSKHAAFETISDPKYSGKMKVLHRLLEQCRGNKDKVLLFSLSTKLLDVLEK
YCIAEGIEYRRLDGNTKSKERVKIVKEFNSTQDINICLVSTMAGGLGLNFVGANIVVLFD
PTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEIIYLRQVYKQQLQCAVVGSENAK
RYFEAVQGSEMHSGELFGIQNLFRMQTEGSCLTREILERDGRVESGIMTAVTRMREETPV
RGMETTTGPNGEPSKENPEITEKMSKASKVPKGILDFSSDSEEDHGNKSKSRDRDSSTTS
PGPVTLLHCGFSKLLDGNKDLGECSNISGSSNMGISESQSSSDEDMEAAPTIELRRSSNF
LPSVTQTSRQEQPQKQKLCKNCALSSESEGDTELGNKPKNCGTSKKTLVARETHCSSEES
DDVILPSQVLDAKRKIPAKGESRSEILLEETEDSEHGNVTGQSSKWHHLLAGKQTDRQTN
STSFQSKTGSVVYKSKMFCKLGEYGDESDDIEIPKNTKLYTSKTKRLKKSVGSTSMTLSK
KHQKHVHFRLQENKTDDLRAESQRIDNFSSSEDDVPTKKVCFSKNCRKRNRVPDRTSSKS
RFASTENHSSKAVKKSSVFEHKSSLNGKPKINQNEKFGSMDTYLDGVQEVAYAHSNQCII
GSSKAENRMSRSAMRDVFELKRFSQAPANLVVSSGETLSEQTDVDLTSTKPTQVDSGNPK
PLHLAHPVTQTESRVHRAGRTTFIIGETPKAICRKQLTEIAAYFKMASVEELADLVFRST
TESRQTMLRDFYCSQHAELKDILTVEYSKPLPEFGKQKTGKNPNCATLGSSDVKNISETD
LKSLRKGARKLTYWESEDPDTSEDSGSSLNQCKSVSKGEEPVCVSQSLPFDNPPIESGNS
ASDSVKQKQKQRHSLSVTEPCRERSKFGANNDAENGNSEKDAITELLGDTSILDGIFNTK
NRNSEPRKSSVLCHVKKAKSRPKDVWDILNEGNEASVNRLTDLSVVERMCIGVNRVAAKT
RREDQAQGSHLWKKNEKFLWKKYEDQETLTPGTSSVDSQI
NT seq 4623 nt   +upstreamnt  +downstreamnt
atggagtcagaatctcaatccgattctgatagcggaacagaggagaggtggtgcgaaggg
gatagatgccttgcgctatactcgggcgatgggaagctctatgaagcgagaataaaaacg
ctagtcttagaagaacacggtaaagctgtggctgttgtgaagtttgttgggtttgatgaa
gaggctgtgtcggttaaaaagcttcagaagatcaagtgccctcagtcacacaagagaagc
ttcatgtttgacgatgaagatctggagaaaccatttttccatgacaggaaaccgccgggc
cctgcagtgccatgtatgttatctgaacatggtgaatgtattccatacacaatcaataga
tacttacgagactatcagcgggaaggagtgaagtttatttacagtcactatgttaaaggc
agaggctgcattcttggagatgatatgggacttggaaaaacagtacaggttatttccttt
ctggcagctgtactgcataaaaaagggactcgagaggacattgaaaacaacatgccagaa
ttcttatgcaagaaaaaagaatctagaccaattgaagccaaaaagatatttctaattgtt
gcgcccctgtctgtcctatataactggaaagatgagttggacacctggggttatttcaga
ggtaccatattgcatggcactaagaaagaagctgaatttgcccgcttgaaaagaggaaag
tgtgagtttgccctgacgacctacgagactctacgcctttgcctcagtgattttaacagc
atcaagtggtctgctgtcattgttgatgaagctcataagataaaaaacccaaattctcag
ataacacaggctatgaaagctctaaagtgcaacgttcgagttggattgactggaaccatt
cttcagaataatacggaagaactgtggtgcgtaatggactgggctataccaggatgcttg
ggcagcctaaatctctttaaagaaaagttttctgttccgattgagcatgggcagaagcac
ggtgtgactaaaagaaacctggcaatgggaagaaaggctatcaggaggctggcaagaaaa
ctgtcttgttggttcctgaggagaaccaagtctcttattagttgccagttgccaaagaaa
gatgacagggtagtgtactgctcattgacagagttccagcaagccgtctacagggctgtt
ttggagtcggaggatgtcaacctgttgctacacagctgtgagccatgcagttgtaatagt
ggacttcagaggaaaagctgttgctataagaaaaacaaagatggagttcctatgcgagct
ttgtatttcagctatctaatgattctgagaaaggtggctaaccatgcagccctgctgcag
tcaaagggaaacacaagcaaggcgcaggaggtttatgtgaaccaggtctgcatgcaagtg
ttcaacaaatttccagactttgtacaacagagcaaacatgctgcatttgaaacaatttct
gaccccaagtatagtggcaaaatgaaggttttgcatcgactgctggagcagtgcaggggg
aacaaagacaaagttcttctcttctcgctctctacaaagctcctggatgtgctagagaaa
tactgcattgcggaaggcattgaataccggagactagatggcaatacaaaatcaaaagaa
agggtcaagattgtgaaggagttcaacagcacacaggatattaacatctgtttagtgtct
acgatggctggtgggttagggttgaattttgtgggagccaatattgttgtgctgtttgac
cctacatggaatccagccaacgatcttcaagcaattgacagggcttatcgaattggtcag
tgcagagatgtgaaagtcttcagattaatatcactgggcactgtagaagaaattatctat
ctacgacaagtgtacaagcagcaacttcagtgtgcagttgttggaagtgaaaacgccaaa
cgctactttgaggcagtgcaaggttcagaaatgcattcaggggaactttttggcattcag
aacctttttcgtatgcagactgaagggtcctgtctaacaagagaaatccttgagagagat
ggtcgggtggaatcaggcataatgacagccgtcactcgaatgagagaggaaactccagta
cgaggaatggaaacaacaacagggcctaatggtgagccatctaaagaaaatccagaaatc
acagaaaagatgagcaaagcatccaaggtaccaaaagggatcttggatttcagcagtgac
agtgaggaggatcatggaaacaagtcaaaatccagggaccgtgattccagtaccacttct
cctggcccggtcactctgcttcactgtggattttctaaactgcttgatggcaataaggac
ctgggggagtgcagtaatatcagtggcagttctaacatgggaatttctgaaagccagagc
tcttcagatgaagatatggaggccgctccaacaattgaattgcgaagatccagtaatttt
ctgccatcagtgactcaaacctcgagacaagagcagcctcaaaaacaaaagctttgcaag
aattgtgccctttctagcgagtctgagggagacacagaattaggaaacaaaccaaagaat
tgtggcacttccaagaagactcttgttgccagggagacccattgtagttcagaagagagt
gatgatgtcatccttccttctcaagtgttagatgcaaaaaggaaaattcctgccaaggga
gaaagtcggagtgaaatcctcttggaagaaactgaggactcagaacatggaaatgtcaca
ggccagtcctctaaatggcaccatttgttagctggcaaacaaacagatcgtcaaaccaat
tcaaccagcttccagagtaaaacaggatcagtagtttacaagtctaaaatgttttgtaag
cttggagagtatggagatgagtctgatgatattgagatcccaaaaaatacaaagttgtac
acctccaaaacaaaaaggttaaagaagtcagtaggttcaacaagtatgactctttccaaa
aagcatcagaagcatgttcatttcagattacaagagaacaaaactgatgatttaagagca
gagtctcagagaattgataacttctcctcttcagaagatgatgttcctaccaagaaagtc
tgctttagtaaaaactgcaggaaaagaaacagggtaccagacaggacgtccagcaaaagt
cggtttgccagtactgaaaatcactcaagtaaagcagtcaagaagtcaagtgtttttgaa
cacaaatcatccctgaatggcaaacctaagattaaccaaaatgagaagtttggatctatg
gacacctatttagatggggttcaggaagttgcatatgctcattcaaatcaatgtattatc
ggctcaagcaaggctgaaaatcgaatgagtcgctcagccatgcgggatgtgtttgaactg
aaaaggttttcccaggcgcctgccaatctagtggtgtccagtggcgagactttgtcagaa
caaactgatgtggaccttacctcaacaaaacctacacaggtggacagtggaaacccaaag
cctcttcatctagcacatcctgtcacacaaacggagagtagagtccacagggcagggagg
actaccttcatcattggagagactcccaaagcaatttgcagaaaacagctgacggagata
gctgcttatttcaagatggcttcagtggaggagctggcagatcttgtttttagaagcacc
acggaatctcgacaaaccatgttgagagatttttactgtagccagcatgctgaactgaaa
gatattttgaccgttgaatattccaaaccattaccagagtttgggaaacaaaagactggc
aagaaccccaattgtgccacattaggttcttctgatgttaaaaatatttccgaaacagat
ttaaaaagcttgagaaaaggtgcaagaaaattgacatattgggaatctgaggatccagac
acctcagaagattcaggtagttctttaaatcaatgcaaatcagtcagcaaaggtgaagag
ccagtttgtgtctcccaaagtcttccttttgacaacccccccatcgagtcaggaaactct
gccagtgatagtgtaaaacagaaacaaaagcagcggcacagtctctcagttacagaacca
tgcagggaaaggtccaagtttggagcaaacaatgatgcagaaaatgggaactctgagaag
gatgccatcacagagctgcttggtgacacctctatccttgatggtatctttaacacaaag
aacagaaattctgagccacgcaagtcatctgtattgtgtcacgtaaaaaaagcgaaaagc
aggcctaaagatgtctgggacatcctaaatgaaggaaatgaggcgagcgttaacaggctt
actgatttatctgtggtggagaggatgtgtatcggtgtcaatcgtgttgctgctaaaacg
agaagagaagaccaggctcagggttctcacctttggaagaagaatgaaaagttcttgtgg
aaaaagtatgaagaccaagagaccttaacacctggcacatcatcagtggactctcagata
tag

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