Polyodon spathula (Mississippi paddlefish): 121304018
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Entry
121304018 CDS
T07273
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like isoform X1
KO
K06751
MHC class I antigen
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
pspa04145
Phagosome
pspa04218
Cellular senescence
pspa04514
Cell adhesion molecules
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121304018
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121304018
04145 Phagosome
121304018
09143 Cell growth and death
04218 Cellular senescence
121304018
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121304018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121304018
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121304018
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121304018
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Antigens
121304018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_I_3
C2-set_3
Motif
Other DBs
NCBI-GeneID:
121304018
NCBI-ProteinID:
XP_041090893
LinkDB
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Position
36:complement(5643374..5675792)
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AA seq
374 aa
AA seq
DB search
MTRVAVLGILCWVHAAAAGTHSLQGFGVATTEGTGFPEFVFLAMLDDVQYMSFNSTMKKP
VFQTHWRNETKGREFRERRSWYILHGQQILKWSLINTVQHFNHTGVHTYQYMGGCELDDD
GTRRAYLSHAYDGKDFISFDVETLTWVAAVPQAVFYKHKQEADPAWQQITLDYHRQDCFL
LLEQYLQYGMETLQRKVRPAVTLIQRKARESAGTDVICHVTGFYPREVEVNWVRDGEAVL
EEGVWSGEVLPNGDTTYQLRKILTVSPEDQKKHSYSCQVHHASLDEKMDVKWAPEAALNV
GFVAGGVLAALGLIIAVIIGVHIWMKRASGARSPDYTAAQTKEQSDASSSSTSDDRCDPV
AEKLTAQIENIQLS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacccgggtggctgtgctcgggattctctgctgggttcatgcagctgccgcaggaact
cactcactgcagggttttggagtggcaaccacagaagggactgggtttccagagtttgtg
tttctggcgatgctggatgatgtgcaatacatgtcctttaacagcaccatgaaaaaaccc
gtcttccaaacacactggaggaatgagacgaagggtcgggagttcagggaaagacgcagc
tggtatattctccatggtcaacaaatcttaaaatggagtttgataaatacagtccagcac
tttaaccatactggagttcacacttatcagtacatgggtggctgtgagctggatgatgac
gggaccaggcgggcatatttgtctcatgcgtatgatgggaaggattttattagttttgat
gtagagaccctgacctgggtcgctgctgtgccacaggctgtcttctataaacacaagcag
gaagctgacccagcctggcaacagatcactttggactatcatagacaggactgtttcctg
ttgctggagcagtacctccagtatgggatggagaccctgcagagaaaagtccgccctgca
gtgacgctgatacagaggaaagcgcgtgaatctgcaggaacggacgtcatttgccacgtg
acggggttctacccccgagaggttgaggtgaactgggtcagagacggggaggctgtgctg
gaggagggggtgtggagtggagaggtgctgcccaacggggacacaacctaccagctgaga
aagatcctgacagtgagtcctgaggaccagaagaaacacagctactcctgccaggtgcac
cacgccagcctggatgagaagatggatgtgaaatgggctccagaggctgctctgaacgtg
gggtttgttgctggtggtgtgctggctgctctgggtctgatcatcgcagtgatcatagga
gttcacatctggatgaaaagagcatcaggtgccaggagccctgactacacagcagcgcag
acaaaggaacaaagtgatgcttcatccagctccaccagcgacgacaggtgtgaccctgtt
gcagagaagctgacggcacagatagagaatatacagctcagctga
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integrated database retrieval system
