Polyodon spathula (Mississippi paddlefish): 121304328
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Entry
121304328 CDS
T07273
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like
KO
K06752
MHC class II antigen
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
pspa04514
Cell adhesion molecules
pspa04672
Intestinal immune network for IgA production
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121304328
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121304328
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121304328
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121304328
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121304328
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121304328
Exosomal proteins of epithelial cells
121304328
Exosomal proteins of breast milk
121304328
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_2
Ig_3
ig
I-set
Motif
Other DBs
NCBI-GeneID:
121304328
NCBI-ProteinID:
XP_041091334
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All DBs
Position
37:3441915..3449868
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AA seq
252 aa
AA seq
DB search
MQDCLYIYILKCFAQTVQYIKVKILCFLVLFTVTHLFRALADCQTNTTMPEKDYELDDDE
LFHFDFDKKEAVQRLPEFAKYWSPPQDAAALAERDMQTCIHNVDGFAKCHQYPPEKQVPP
RVTLYQENDLELGKPNTLICFIDGFHPAAIKVTWTKNTMPVTEGVTLTQYYSNKDFTLQM
FSYLSFTPELGDVYSCQVQHSALSETLTTFWEPDVQTDSDVGETAFCAVGLTLGLLGVAV
GTFFLIKGNKCN
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattgtttatatatatatatattgaaatgctttgcacaaactgtgcagtacatt
aaagtgaagatattgtgttttttggttttattcacagtgacacacttgttcagagcatta
gctgattgccaaactaacaccacaatgccggaaaaggattacgagctggacgatgatgag
ctgtttcattttgattttgataagaaggaggcggtgcagaggctccccgagttcgctaag
tactggagtcctcctcaggatgcagcagcattagcagagagagacatgcagacctgcata
cacaacgtggacggctttgcaaaatgtcatcaataccctccagagaaacaagtccctcct
cgtgttacactgtaccaggagaatgacctggagctggggaagcccaacactctcatctgc
ttcatcgatggctttcacccagcagccatcaaagtgacctggaccaagaataccatgcca
gtgactgagggagtcaccctcacccagtattactccaataaagatttcaccctccagatg
ttctcgtacctgagcttcactccggagctgggagatgtgtactcctgccaggtccagcac
agtgctctgtctgaaacactcacaacgttctgggagccggatgtgcagacagattctgat
gttggggagacagcgttctgcgctgtggggctgactctggggctcctgggagtggctgtc
gggaccttcttcctcatcaaagggaacaagtgcaactga
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