Polyodon spathula (Mississippi paddlefish): 121305005
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Entry
121305005 CDS
T07273
Name
(RefSeq) bone morphogenetic protein 2-like
KO
K21283
bone morphogenetic protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121305005
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121305005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121305005
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121305005
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Transforming growth factors (RSTK binding)
121305005
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Morphogens
121305005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
121305005
NCBI-ProteinID:
XP_041092410
LinkDB
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Position
40:complement(164906..172881)
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AA seq
425 aa
AA seq
DB search
MMVPANLLVLMALMIPQAWSSLEGRSSSEPPQPAQAIQTLLLTRLGLRSLPTPRPGVLIP
QYLLHLYHFHCQEFHLIRDSGFVFPAGHTQSANTVRGFHHLEASEDLSSSPLRETNQLHF
SFNVSSVPADEQVTSVELRFYRRDNSGHADSGLQRVNLYHIPDHESTPHSEKNARLLESR
LLTHDPGTDKWESFNVSSDVFHWVGRRAGNLVFMMEVIHLNGSHPYLKQRGHLRVRRSVD
QDESSWAHERPLLVTYSLDGRGQPLTPKVTKRHGKGQDFVPRVKGWDKGLESGHKRSDGQ
GPDGKRVKRTGKRNQKLKKLAKARCKRHPLFVNFKDVGWNRWIVAPSGYHAYYCQGECRF
PLADHMNSSSHAMVQTLVNSVNHKVPRACCVPTELSSIAMLYLDQHDRVVLKNYQDMVVE
SCGCR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgatggtacctgctaacctcctggttctgatggctctgatgatacctcaagcctggtca
agtctcgagggtagatcgagcagtgagcccccccagcctgcccaggccatccagaccctc
ctcctgacacggttgggactgaggagcctcccgacgccccgccccggagtcctgatccct
cagtacctgctccatctctaccacttccactgccaggagttccacctcatccgggactca
gggttcgtattcccagctgggcacacccagagcgccaacaccgtgcgtggcttccatcac
ctggaggcttctgaagacttgtcttccagtccactacgagagaccaaccagctccatttc
tctttcaacgtctcgtcggttcctgcagacgagcaggtgacctcagtcgagctccgcttc
taccgccgagacaactcgggccacgcagactctggtttacaaagggttaacttatatcac
atccctgatcacgaatccactcctcactctgagaagaacgcccggcttctggaatccaga
ctgctgacacatgacccaggtacagacaagtgggagagcttcaatgtcagttctgacgtc
ttccactgggttggcagaagagctggcaacttggttttcatgatggaggtaattcacctc
aatggaagccacccttatctgaaacagagaggacaccttcgagttagaagatctgtggac
caggatgaatctagctgggctcacgagagacccttactggtcacctacagcctggatggg
cgagggcagcctttgacacctaaagtcacaaaaaggcatggcaaaggccaggactttgtt
ccaagggtaaaaggatgggataaaggcttggagagtggtcacaaaaggagcgatggacaa
gggcctgatgggaaaagggtcaaaagaaccgggaaaaggaaccagaagctgaaaaagtta
gcaaaggctcgttgcaaaagacaccccttgtttgtcaattttaaggacgtgggctggaat
cgatggatcgttgctcccagtgggtaccatgcctactattgccaaggggaatgtcgcttc
cctttggcagaccacatgaactcctcaagccatgcaatggtccagactttggtgaactcg
gtcaaccacaaggtcccgcgcgcctgctgtgtcccgacagagctcagctccatcgccatg
ctctacctggaccaacatgaccgtgtggtcctcaagaactaccaggacatggtggttgag
agctgcggctgcagatag
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