Polyodon spathula (Mississippi paddlefish): 121306044
Help
Entry
121306044 CDS
T07273
Name
(RefSeq) uncharacterized protein LOC121306044
KO
K12648
mitochondrial antiviral-signaling protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04621
NOD-like receptor signaling pathway
pspa04622
RIG-I-like receptor signaling pathway
pspa04623
Cytosolic DNA-sensing pathway
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121306044
04622 RIG-I-like receptor signaling pathway
121306044
04623 Cytosolic DNA-sensing pathway
121306044
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121306044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
Motif
Other DBs
NCBI-GeneID:
121306044
NCBI-ProteinID:
XP_041097377
LinkDB
All DBs
Position
1:105533391..105550986
Genome browser
AA seq
623 aa
AA seq
DB search
MSFVSDTLYNNYIRPNIPCYVEKVKANQVLMHITCLTDNDKEEINAKLYSSGNYVAMQMF
FDCLKRRKNWPSEFIEALKSVKQDDLAIELEREYSRLKYPQRSSPVPAPHQPPAVSVPDA
PPTVASSPPSTTNQPLIPLEAAVYIHGNNNNNPAAAPPALPQNPSEPHAWVLPSPSPVSN
AIVQTSLPANLLQGATSHSHGSHAISDPEPEVAPAPYSVLSRPEGNSRRDQVEVKTSVQE
TAPPHANYNTVPRAVGPPNSNSDTKRNQIDANHQLTGAPQESKIRRSVDSSGRPPAGPGQ
TEAIPSIRGATAGSGTEEYLSKPGILRSTNIDDQPCSVTSSQLQRSGDIIESPSMSGVSQ
VPENLIRGTPLSGVEDDCCPSHDTSASSPCHSAVPNGLFNFEEYNKEQKIQALRGYQNPN
LMDSLVAVDNPLQIQGQYNTFPKLAQSPKTSGACGPSENSTINRGQHSERKQRSPSKPWR
SVGSEEIRSPNIPKSYSSPTDQHLGTRGRETTEGTASYSDVRQVVVQFSQNPNIDDHASN
QFIQLREKSPQSGRSWSDSERPQTSLHTREWENLGSISVQSLENNQREPRGDARRQFDAY
LFPAIAIAASSVAAVLLWRYMKK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtaagtgatacattatacaataactacattcgacccaacatcccctgttat
gtggaaaaagtaaaagcgaatcaggtgttaatgcatattacctgtctcactgacaatgac
aaggaagaaattaacgccaaactatattcgtctggcaattatgttgctatgcaaatgttt
ttcgattgcctaaagcgaagaaaaaactggccaagcgagtttattgaagctcttaaatca
gttaagcaggatgacctggccatcgagctcgagagagaatattccagactgaaataccct
cagcgtagcagcccagtccctgctccccatcagccaccggctgtgtctgtacctgatgct
cccccaacagtagcttcttctcccccatcaaccaccaaccagcccttaatcccattagaa
gctgcagtctacatccatggaaataataataataatccagctgcagctcctccagctctt
ccacagaatccttcagaacctcatgcttgggtcttaccttctccatccccagtatctaat
gccattgttcagacatccctcccagcaaacctcctccaaggtgctacttcccactcccat
ggctcccatgcaatctctgatccggagccagaagtagccccggccccctattcagttctt
tccaggccagaggggaacagcagaagagaccaggtggaagttaagacctcagttcaggaa
actgcacctccacatgccaactataacacagtgccaagagctgtgggacctccaaacagc
aactctgatacaaaaagaaatcagattgatgcaaaccatcagcttacaggggcaccccag
gaaagcaaaattagaaggtctgtggattcatctgggagaccacctgcaggcccaggccag
actgaggccatcccgtcaattagaggggccacagccggatccgggacagaagaatattta
agtaagcctggcatactaagatcaacaaacattgatgaccagccttgctctgtgacttcc
agtcagctgcagcgttcaggtgatataatagaaagcccctccatgtctggtgtcagccag
gtccctgaaaatcttattaggggaacgccactcagtggagttgaagacgactgttgcccg
tcccatgacacctctgcatcgtctccctgccacagtgctgtgcccaatggcctcttcaat
tttgaagagtacaacaaggagcagaagattcaggcattacgtggctatcagaacccaaac
ctgatggatagtttagtggctgttgacaacccccttcagatacaaggtcagtacaatact
ttcccaaaacttgctcaaagtcctaaaacaagtggggcgtgcggtccatcggaaaattca
accattaacaggggacagcatagcgagaggaaacaaagaagcccatctaaaccatggcgc
agtgttggatcagaagaaattagatccccaaatatacccaaaagctacagctcacccaca
gatcagcaccttggtacaagaggaagggaaaccacagaggggacagccagttactcagat
gtcagacaggttgtggtgcaattttcacaaaatcccaatatcgatgatcatgcttcaaat
cagtttatacagttgagagaaaaatctcctcaaagcggtcgatcttggtctgactctgag
cgtccgcaaacaagtttgcatacacgtgaatgggagaatttaggatcaatctcagtgcag
tcgcttgaaaataaccaaagagagcccagaggtgatgcaagaaggcagtttgatgcctac
ctgttcccagccattgccattgctgcttcatccgttgctgctgtgctgttgtggagatac
atgaaaaagtag
DBGET
integrated database retrieval system
