Polyodon spathula (Mississippi paddlefish): 121306955
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Entry
121306955 CDS
T07273
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-like isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121306955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121306955
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
121306955
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121306955
Heterochromatin formation proteins
Other heterochromatin formation proteins
121306955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
Pre-SET
MBD
Chromo_MORC2_6th
DUF4537
Laminin_II
Motif
Other DBs
NCBI-GeneID:
121306955
NCBI-ProteinID:
XP_041094912
LinkDB
All DBs
Position
51:complement(74118..94414)
Genome browser
AA seq
1332 aa
AA seq
DB search
MASPVDVSRMEQEVVEELGVSMDELRVWIDHEVEKCDFIKQRKAQLRELESWVQQKEAEV
ESVDKLFVDASQSVVDCEALVKELYSKLSLSYRESSSEDEGAGSKGGREGEVIEIDDEED
EDDEVVVDEEHVVPAAKPAAPNAKDPAVFKDAMAAMKKSAQEVQKFVDAVSKSSPEPPST
SLLNRGPPAPQSVSSQPPQQAGDAAVKEGELVLYMRILGKKRTKTWHKGTLIAINPTGSG
SFKYKVKFDNKGKSLLSGNHVAFDYHPALDRLHVGARVVAKYKDGSQVWLYAGVVAEMPN
SKNKMRFLIFFDDGYASYVSLPELYPICRPLKKTWEDIEDASCRDFIEEYVTSYPNRPMV
LLKAGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDVGALFQDDKRCEWIYRGSTRLEPMF
NLKMNTANFQEKKQAGLQRTRPNMGALRSKGPVVQYTQELSGTSPAKPAAPGSQPRILPK
PDSPQTRPARSESPDSQVSSQSRNKQQVAKKSTSAFGAPKTPPSSSSPAESQGQNQNQSQ
SQGQNQNQSQGQNQSLTRTLIPTSHPRYFLLHTATTAPLQQTQQQQQQPVLPQASSSPQL
YHSSLSDRMPVEPSYQAPSEKLFYVPHSCSPACLDRLRPARLDQFRGRNPLLVPLLYDFR
RMTGRRRVNRKMWFHVIYKSPCGLSLRSMLEIERYVFSTRCDFLFLEMFCLDPYVLVDRR
FQPQKPFYFVRDITRGREDVPLSCVNEIDMTPPPSVAYSKERLPGKGVVINTSGEFLVGC
DCTDGCRDKSKCACHQLTLQATTCTPGAQMNPNAGYTDKRLEECLPTGVYECNKRCGCDP
QMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEM
GDEYFANLDHIESVENFKEGYESDAKCSSDGSGVDVKGGARGGALRRGQPGGRGQGGPAQ
QRDRENEDNSDRSDSDSDDEDDEEEDEEEDEEDDEEEEESSDDNFCKEEYFNAGSVWRSY
ATRRQTRGMKEGGSTATAPGEDSKEGLSRQQSQEDSQPPVSEETGKNKVASWLSGIKQEQ
GKPIKKELQQDKDCKEEQKVFENPRIFGYNPFPAKTEGVRRPVTKTQLLQSGRGPGAQTQ
AEDVMTLSSSDSEGGRKRRGAQNPGNDSDDIQTISSGSEVEERRNSSAGNTSTGPVKRQV
AVKSTRGFALKSTHGIAVKTSNMPSAEKGDGAPVWKKTRPLYDGEESCYIIDAKLEGNLG
RYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLC
CCGSTECRGRLL
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccggtggacgtctccaggatggagcaggaggtggtggaggagctgggggtg
tccatggatgagctgcgggtctggatcgaccacgaggtggagaaatgtgacttcatcaag
cagcgcaaagcgcagctgagagagctggagagctgggtgcagcagaaagaggccgaggtg
gagtctgtggacaagctctttgtggacgcttcacagtctgtggtggactgcgaggctctg
gtgaaggagctctactccaagctgagtctgagctatcgggagagcagctctgaggacgag
ggcgcgggctccaaggggggcagagagggtgaggtcatcgagatcgacgatgaggaggac
gaggacgacgaagtggtggtggacgaggagcacgtcgttcctgcagcgaagccggctgct
cccaacgccaaggatccggcagtgtttaaagatgcaatggccgctatgaagaagtctgct
caggaggtccagaagtttgtggatgccgtttccaagagcagccctgagcccccctccacc
tccctgctgaaccgaggacccccagcccctcagagtgtctcctcccagcccccgcagcag
gcaggggacgccgcagtgaaagagggggagctggtgctgtacatgcgcatcctgggcaag
aagaggaccaagacctggcacaagggcaccttgatcgccatcaaccccacgggctcgggc
agcttcaaatacaaagtgaaattcgacaacaaggggaagagcctgctgtcggggaaccac
gtggcgttcgactaccaccccgcgctggacaggctgcacgtgggcgcccgcgtggtcgcc
aagtacaaggacgggagccaggtgtggctctacgcgggcgtggtggcagagatgcccaac
agcaagaacaaaatgaggtttctgatcttcttcgatgacggctatgcctcttacgtcagt
ctgccagagctgtacccgatctgccggccgttgaaaaagacctgggaggatatcgaggat
gcttcctgccgtgacttcatcgaggagtacgtcacctcctaccccaaccggccaatggtg
ctgctcaaagcaggtcagctgatcaagacggagtgggaggggacctggtggaagtcccgc
gtggaggaagtggacggcagcctggtgaaaatcctcttcctggatgttggtgctctgttc
caggacgataagcgctgcgagtggatctaccgcggctccacgcggctcgaacccatgttc
aacctcaagatgaacacggccaacttccaggagaagaagcaagcagggctgcagaggacc
cggccgaacatgggcgcgctgaggtccaagggcccggtggttcagtacacccaggagctg
agtgggacgagcccggccaagccagccgcaccaggatcccagcccaggatcctgcccaag
cccgactccccgcagacacggcccgcccggagcgagagtcccgacagccaggtgtcgtct
cagagccgcaacaagcagcaggtagcgaagaagagcacctccgccttcggggcacccaag
actcccccctcctcctcctctcctgctgagagccagggccagaaccaaaaccaaagccag
agccagggccagaaccaaaaccagagccagggccagaaccagagccttaccaggactctg
atcccaacctcgcaccccaggtacttcttactccacaccgctaccaccgcacccctccag
caaacccagcagcagcagcagcagccagtcctcccgcaagcctcctcctcccctcagctc
taccactcctccctgagcgaccgcatgcccgtggagccctcctaccaggcccccagcgag
aagctcttctacgtgcctcacagctgcagcccggcctgcctggaccgcctccgcccggcg
cggctggaccagttccgcggacgcaacccgctcctcgtccccttgctctacgacttccgc
cgcatgacgggccggcgccgggtgaaccggaagatgtggttccacgtgatctacaagtcc
ccgtgcgggctgagcctgcgcagcatgctggagatcgagcgctacgtgttctccacccgc
tgcgacttcctttttctggagatgttctgcctggacccctacgtgctggtggaccgccgc
ttccagccccagaagcccttctacttcgtgcgggacatcacccgcggcagggaggacgtg
ccgctgtcctgcgtcaacgagatcgacatgaccccgccccccagcgtggcctacagcaag
gagcggctcccgggcaagggagtggtgatcaacaccagcggagaattcctggtggggtgc
gactgcaccgacggctgcagagacaagtccaagtgtgcgtgtcaccagctgactctgcaa
gccaccacctgcaccccaggggcgcagatgaaccccaacgcagggtacacggacaagagg
ctggaggagtgcctgcccacgggagtctatgagtgtaataagcgctgtggctgtgacccc
cagatgtgcacgaacagactggtgcagcacgggctgcaggtgaggctgcagctgttcaag
actcagaacaagggctggggcatccgctgcctggacgacatcgccaagggctccttcgtg
tgcatctacgcaggtaaaatcctgactgacgacttcgccgataaggaaggcctggagatg
ggggacgagtatttcgctaacctggatcacatcgagagtgtggagaacttcaaggagggc
tacgagagcgacgccaagtgctcctcggacgggagcggggtggacgtgaagggaggggcc
aggggcggggccttgaggcggggacagcccggggggcggggccagggcggcccggcgcag
cagcgggacagagagaacgaagacaacagcgaccgctcggactcggactcggacgacgag
gacgacgaggaggaggacgaggaggaggacgaggaggacgacgaggaggaggaggagagc
tcggacgacaacttctgcaaggaggagtacttcaacgctggctcggtgtggcgcagctac
gccacccgcaggcagactcgcggcatgaaggaggggggctccactgccaccgcgccgggg
gaggacagtaaggagggtctgtcccggcagcagagccaggaggacagccagccccccgtg
tcggaggagactgggaagaacaaggtggcgtcctggctgagcggcatcaagcaggagcag
ggcaagcccatcaagaaggagctgcagcaagacaaggactgcaaggaagaacagaaggtg
tttgagaaccccaggattttcgggtacaacccgttcccggcgaagaccgagggggtgcgt
cgtcccgtcaccaaaacccagctgctgcagagcgggcgcggcccgggggcgcagacacaa
gcagaggatgtgatgaccctgtccagctctgacagcgaggggggccggaagaggaggggg
gctcagaaccccggcaacgacagcgatgacatccagaccatctcgtcggggtccgaggtg
gaggagaggaggaacagcagcgctggcaacaccagcacagggccagtgaagaggcaggtc
gctgtcaagtcgactcgcggtttcgctctgaagtcgacgcacggcatcgcggtgaagacg
agcaacatgccttcggcagagaagggcgacggcgcccccgtctggaaaaagacgcgtccg
ctgtacgatggagaggagtcctgttacatcatcgatgccaagctggaggggaacctgggg
agatacctcaaccatagctgcagccccaacctgtttgtccagaatgtctttgtggacacc
cacgatctgaggtttccctgggtcgcattcttcgccagcaagcgaatccgggccgggacc
gagctgacctgggattataactacgaggtggggagcgtggagggcaaggagctgctgtgc
tgctgtggatccacagagtgccggggcagactgctgtaa
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