Polyodon spathula (Mississippi paddlefish): 121306955
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Entry
121306955 CDS
T07273
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-like isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121306955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121306955
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
121306955
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121306955
Heterochromatin formation proteins
Other heterochromatin formation proteins
121306955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
Pre-SET
MBD
Chromo_MORC2_6th
DUF4537
Laminin_II
Motif
Other DBs
NCBI-GeneID:
121306955
NCBI-ProteinID:
XP_041094912
LinkDB
All DBs
Position
51:complement(74118..94414)
Genome browser
AA seq
1332 aa
AA seq
DB search
MASPVDVSRMEQEVVEELGVSMDELRVWIDHEVEKCDFIKQRKAQLRELESWVQQKEAEV
ESVDKLFVDASQSVVDCEALVKELYSKLSLSYRESSSEDEGAGSKGGREGEVIEIDDEED
EDDEVVVDEEHVVPAAKPAAPNAKDPAVFKDAMAAMKKSAQEVQKFVDAVSKSSPEPPST
SLLNRGPPAPQSVSSQPPQQAGDAAVKEGELVLYMRILGKKRTKTWHKGTLIAINPTGSG
SFKYKVKFDNKGKSLLSGNHVAFDYHPALDRLHVGARVVAKYKDGSQVWLYAGVVAEMPN
SKNKMRFLIFFDDGYASYVSLPELYPICRPLKKTWEDIEDASCRDFIEEYVTSYPNRPMV
LLKAGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDVGALFQDDKRCEWIYRGSTRLEPMF
NLKMNTANFQEKKQAGLQRTRPNMGALRSKGPVVQYTQELSGTSPAKPAAPGSQPRILPK
PDSPQTRPARSESPDSQVSSQSRNKQQVAKKSTSAFGAPKTPPSSSSPAESQGQNQNQSQ
SQGQNQNQSQGQNQSLTRTLIPTSHPRYFLLHTATTAPLQQTQQQQQQPVLPQASSSPQL
YHSSLSDRMPVEPSYQAPSEKLFYVPHSCSPACLDRLRPARLDQFRGRNPLLVPLLYDFR
RMTGRRRVNRKMWFHVIYKSPCGLSLRSMLEIERYVFSTRCDFLFLEMFCLDPYVLVDRR
FQPQKPFYFVRDITRGREDVPLSCVNEIDMTPPPSVAYSKERLPGKGVVINTSGEFLVGC
DCTDGCRDKSKCACHQLTLQATTCTPGAQMNPNAGYTDKRLEECLPTGVYECNKRCGCDP
QMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEM
GDEYFANLDHIESVENFKEGYESDAKCSSDGSGVDVKGGARGGALRRGQPGGRGQGGPAQ
QRDRENEDNSDRSDSDSDDEDDEEEDEEEDEEDDEEEEESSDDNFCKEEYFNAGSVWRSY
ATRRQTRGMKEGGSTATAPGEDSKEGLSRQQSQEDSQPPVSEETGKNKVASWLSGIKQEQ
GKPIKKELQQDKDCKEEQKVFENPRIFGYNPFPAKTEGVRRPVTKTQLLQSGRGPGAQTQ
AEDVMTLSSSDSEGGRKRRGAQNPGNDSDDIQTISSGSEVEERRNSSAGNTSTGPVKRQV
AVKSTRGFALKSTHGIAVKTSNMPSAEKGDGAPVWKKTRPLYDGEESCYIIDAKLEGNLG
RYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLC
CCGSTECRGRLL
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccggtggacgtctccaggatggagcaggaggtggtggaggagctgggggtg
tccatggatgagctgcgggtctggatcgaccacgaggtggagaaatgtgacttcatcaag
cagcgcaaagcgcagctgagagagctggagagctgggtgcagcagaaagaggccgaggtg
gagtctgtggacaagctctttgtggacgcttcacagtctgtggtggactgcgaggctctg
gtgaaggagctctactccaagctgagtctgagctatcgggagagcagctctgaggacgag
ggcgcgggctccaaggggggcagagagggtgaggtcatcgagatcgacgatgaggaggac
gaggacgacgaagtggtggtggacgaggagcacgtcgttcctgcagcgaagccggctgct
cccaacgccaaggatccggcagtgtttaaagatgcaatggccgctatgaagaagtctgct
caggaggtccagaagtttgtggatgccgtttccaagagcagccctgagcccccctccacc
tccctgctgaaccgaggacccccagcccctcagagtgtctcctcccagcccccgcagcag
gcaggggacgccgcagtgaaagagggggagctggtgctgtacatgcgcatcctgggcaag
aagaggaccaagacctggcacaagggcaccttgatcgccatcaaccccacgggctcgggc
agcttcaaatacaaagtgaaattcgacaacaaggggaagagcctgctgtcggggaaccac
gtggcgttcgactaccaccccgcgctggacaggctgcacgtgggcgcccgcgtggtcgcc
aagtacaaggacgggagccaggtgtggctctacgcgggcgtggtggcagagatgcccaac
agcaagaacaaaatgaggtttctgatcttcttcgatgacggctatgcctcttacgtcagt
ctgccagagctgtacccgatctgccggccgttgaaaaagacctgggaggatatcgaggat
gcttcctgccgtgacttcatcgaggagtacgtcacctcctaccccaaccggccaatggtg
ctgctcaaagcaggtcagctgatcaagacggagtgggaggggacctggtggaagtcccgc
gtggaggaagtggacggcagcctggtgaaaatcctcttcctggatgttggtgctctgttc
caggacgataagcgctgcgagtggatctaccgcggctccacgcggctcgaacccatgttc
aacctcaagatgaacacggccaacttccaggagaagaagcaagcagggctgcagaggacc
cggccgaacatgggcgcgctgaggtccaagggcccggtggttcagtacacccaggagctg
agtgggacgagcccggccaagccagccgcaccaggatcccagcccaggatcctgcccaag
cccgactccccgcagacacggcccgcccggagcgagagtcccgacagccaggtgtcgtct
cagagccgcaacaagcagcaggtagcgaagaagagcacctccgccttcggggcacccaag
actcccccctcctcctcctctcctgctgagagccagggccagaaccaaaaccaaagccag
agccagggccagaaccaaaaccagagccagggccagaaccagagccttaccaggactctg
atcccaacctcgcaccccaggtacttcttactccacaccgctaccaccgcacccctccag
caaacccagcagcagcagcagcagccagtcctcccgcaagcctcctcctcccctcagctc
taccactcctccctgagcgaccgcatgcccgtggagccctcctaccaggcccccagcgag
aagctcttctacgtgcctcacagctgcagcccggcctgcctggaccgcctccgcccggcg
cggctggaccagttccgcggacgcaacccgctcctcgtccccttgctctacgacttccgc
cgcatgacgggccggcgccgggtgaaccggaagatgtggttccacgtgatctacaagtcc
ccgtgcgggctgagcctgcgcagcatgctggagatcgagcgctacgtgttctccacccgc
tgcgacttcctttttctggagatgttctgcctggacccctacgtgctggtggaccgccgc
ttccagccccagaagcccttctacttcgtgcgggacatcacccgcggcagggaggacgtg
ccgctgtcctgcgtcaacgagatcgacatgaccccgccccccagcgtggcctacagcaag
gagcggctcccgggcaagggagtggtgatcaacaccagcggagaattcctggtggggtgc
gactgcaccgacggctgcagagacaagtccaagtgtgcgtgtcaccagctgactctgcaa
gccaccacctgcaccccaggggcgcagatgaaccccaacgcagggtacacggacaagagg
ctggaggagtgcctgcccacgggagtctatgagtgtaataagcgctgtggctgtgacccc
cagatgtgcacgaacagactggtgcagcacgggctgcaggtgaggctgcagctgttcaag
actcagaacaagggctggggcatccgctgcctggacgacatcgccaagggctccttcgtg
tgcatctacgcaggtaaaatcctgactgacgacttcgccgataaggaaggcctggagatg
ggggacgagtatttcgctaacctggatcacatcgagagtgtggagaacttcaaggagggc
tacgagagcgacgccaagtgctcctcggacgggagcggggtggacgtgaagggaggggcc
aggggcggggccttgaggcggggacagcccggggggcggggccagggcggcccggcgcag
cagcgggacagagagaacgaagacaacagcgaccgctcggactcggactcggacgacgag
gacgacgaggaggaggacgaggaggaggacgaggaggacgacgaggaggaggaggagagc
tcggacgacaacttctgcaaggaggagtacttcaacgctggctcggtgtggcgcagctac
gccacccgcaggcagactcgcggcatgaaggaggggggctccactgccaccgcgccgggg
gaggacagtaaggagggtctgtcccggcagcagagccaggaggacagccagccccccgtg
tcggaggagactgggaagaacaaggtggcgtcctggctgagcggcatcaagcaggagcag
ggcaagcccatcaagaaggagctgcagcaagacaaggactgcaaggaagaacagaaggtg
tttgagaaccccaggattttcgggtacaacccgttcccggcgaagaccgagggggtgcgt
cgtcccgtcaccaaaacccagctgctgcagagcgggcgcggcccgggggcgcagacacaa
gcagaggatgtgatgaccctgtccagctctgacagcgaggggggccggaagaggaggggg
gctcagaaccccggcaacgacagcgatgacatccagaccatctcgtcggggtccgaggtg
gaggagaggaggaacagcagcgctggcaacaccagcacagggccagtgaagaggcaggtc
gctgtcaagtcgactcgcggtttcgctctgaagtcgacgcacggcatcgcggtgaagacg
agcaacatgccttcggcagagaagggcgacggcgcccccgtctggaaaaagacgcgtccg
ctgtacgatggagaggagtcctgttacatcatcgatgccaagctggaggggaacctgggg
agatacctcaaccatagctgcagccccaacctgtttgtccagaatgtctttgtggacacc
cacgatctgaggtttccctgggtcgcattcttcgccagcaagcgaatccgggccgggacc
gagctgacctgggattataactacgaggtggggagcgtggagggcaaggagctgctgtgc
tgctgtggatccacagagtgccggggcagactgctgtaa
DBGET
integrated database retrieval system
