Polyodon spathula (Mississippi paddlefish): 121307244
Help
Entry
121307244 CDS
T07273
Name
(RefSeq) nectin-4-like isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121307244
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121307244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121307244
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Nectin family
121307244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
Ig_2
ig
C2-set_2
DUF6377
YbhQ
Protocadherin
Ig_CD22
TMEM51
TM_ErbB1
DUF4381
LapA_dom
SID-1_RNA_chan
EphA2_TM
Ly49
TMEM154
CRIM1_C
Motif
Other DBs
NCBI-GeneID:
121307244
NCBI-ProteinID:
XP_041095327
LinkDB
All DBs
Position
54:355483..369962
Genome browser
AA seq
628 aa
AA seq
DB search
MDFEIHGIGFCRCPPGFLICIVLIVSPAPSLCGFLEPPTPVFSLSALEEGVARLPCRFEP
KSETQTNGTKEVVQQVAWFKVPPENEGAVNREQIILFHTTMGQHVFDPYKDRVSFEKAQP
IANSALLIRGLTLEDQGDYVCQVITFPSGNFETTIKLSLLSLPVSSLDPASPPLVEGSAL
AVAAVCTAWGVVPPTVAWETGLEGSIQLNQAAGGKVTNKFWVRPSRGMNGEKLDCLITHQ
SLSEPRRIPYTVVVHYPPDVSLTGYGNDWFVGMESGALKCVGKGNPEPNHFTWTRRDSAL
PDGVSVVNGSLSFPRPLELSDSGVYICRSSNRAGFGEAKLEIRVSETEIRKADSSSVVMI
AVGVVVAVLLVTLVIAVLLLNRHHKRRNKELERALNMKTEELSSLSRQTSFRRLNSINTD
PRSQTDESIPLREEAIVRQSSISLVDNSARSRDSRSTLSTVRGVSGFPGRPHLHRDDERE
ETEEDEEAHSSRLRVESFVRSSTRSLREPGLRPPLNPSLLRTHLTRSLPRSLPRPLPRER
TNGSARHLTERRLWDSSLGSQGEESQEREESYDELSEDGERGGQGEGVEMERECITEALS
QHFHMDNGTLRPKPTSNGIFIHPKAHFV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaatacacggaatcggtttctgtcggtgcccgccggggtttcttatctgc
atcgtgttaattgtatcgcctgccccttctctctgcggtttcttggagccccccacccct
gtgttctccctcagtgctctggaagaaggggtagctcgtctgccctgtcgattcgaaccc
aagtcagaaacgcagacaaacggcacgaaggaggtggtgcaacaggtggcctggttcaaa
gtacccccagaaaacgagggcgctgtgaatcgagagcagatcatcctctttcacacaacg
atgggacaacacgttttcgacccttacaaagacagggtctccttcgagaaggcgcagcct
atagccaactccgccctgctgatcagaggcttgactctggaagatcagggggactacgtg
tgtcaggtgatcactttcccatcgggaaacttcgagaccaccatcaagctgagtctgctg
agccttccggtctccagcctcgatcccgcctccccacctctcgtggaaggttccgcactt
gccgtggcggcagtctgcactgcctggggggtcgtgccccccacggttgcctgggagacg
ggcctggaagggtcaatccagcttaatcaagcggccgggggcaaagtgacaaacaagttc
tgggtgaggcccagtcgagggatgaacggagagaagctggactgcttgatcactcaccag
agtctcagcgaaccgaggaggatcccctacaccgtcgtggtgcactatcctccggacgtg
tcgctgacaggctacggaaatgattggttcgtcgggatggaaagcggggctttgaaatgc
gtggggaaagggaacccagaaccaaaccacttcacgtggacaaggagggactcggctctc
ccggatggagtgagtgtggttaacggctctctctcgttccctcgcccactggagctctct
gactcgggtgtctatatctgccgctcgtcaaacagagctggcttcggggaggcgaagctg
gagatccgagtgtcagagacggaaataaggaaagccgattccagctccgtggtgatgatc
gccgtgggagtggttgtcgcggtgttgctggttaccctggtgatcgctgtgctgttgctc
aatcgacatcacaagcgaaggaacaaggagctggagagggcactgaacatgaaaactgag
gagctctcttccttatccagacaaacctctttcagaagactgaactctatcaacaccgac
ccccggtctcagacggacgaaagcatcccgctacgagaagaagccatcgtgagacaaagc
tccatctctctagtggataattccgctcgtagtcgggacagccgctccaccctgtcgacg
gtgcgaggggtgtcggggttcccgggccgcccccacctgcaccgggacgatgagagggag
gagacggaggaggacgaggaagcccatagctccaggctgagagtcgagtcgtttgtcagg
agcagcaccaggtcgctgcgggagcctggacttcgcccccctctgaacccctcccttctg
agaacccacctcacccgctccctgccccgctccctgccccgccccctgccccgcgagaga
acaaacggcagcgcccggcacctgaccgagaggagactctgggactcctctctgggatcc
cagggggaggaatctcaagagcgggaggagtcctacgatgagctgagcgaggacggggaa
agagggggacagggagagggggtagagatggagagagagtgcattaccgaagccctttcc
cagcacttccacatggacaacgggacgctccgaccgaaaccgacctccaacgggattttc
atccatcccaaggcgcattttgtgtga
DBGET
integrated database retrieval system
