Polyodon spathula (Mississippi paddlefish): 121308884
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Entry
121308884 CDS
T07273
Symbol
rapgef3
Name
(RefSeq) rap guanine nucleotide exchange factor 3 isoform X1
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04081
Hormone signaling
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121308884 (rapgef3)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121308884 (rapgef3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
121308884
NCBI-ProteinID:
XP_041097518
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MQVYLFDGSSDNNINMPLFRSHVYHVQPDRVSAETDTIRGISWTPLPENLDSAETLKQFS
SERVWRAGRVLHSALLEHTPSLIRDRKHHLKTYRQCSSGRELVDWLIRLSVSVQSRSQAV
GVLQVLLDEGVLAHVKQELNFQDRDSQFYHFPEAESGVEPAANEKEREEELQESLLLLIQ
MGPDALLTMILRKPPNQRTAEELEVIFEELLHIKAVAHLSSSVRRELAAVLVFESHAKAG
TVLFSQGDKGTSWYIIWKGSVNVVTHGKGLVTTLHEGDDFGQLALVNDAPRAATIILRED
RCHFLRVDKHDFIRILKDVEANTVRLEEHGKVVLVLEKSPRGGPANQGASGNSHKYTVMS
GTPEKILEHLLESVRLDSGCSDLTETCMTDFLQTHKVFMPTSLLCPALLHHYLAEPSEGS
ELEKAAYSLNKKQKILRLVGQWVSLYGELLKEDPIAMDFLERLTEGVQSDSRLTSMLREQ
LQDHRKTRISESSCQTPPPAQALNCLNWFANPEEHLGSCQPIRAQDRVLQKYFRPDHTFV
SLMLPVNVSAQEVMSSLVNPGGNHVLVKMNSSGDKLQLKLDATRVHTALGLNERLFICTA
DQVDKLTPLREQLGPEVGTTDSLEQMSSKDLASQLSDYDWELFSCVHQVELVYHVFGQHK
FHGATTANLQRFMLRFNEVQYWVATEMCLCSEMGRRAQLLRKFIKIASILKEQKNLNSFF
AVMFGLGNSAVRRLSLTWERLPNKTKRIYSAYERLMDPSLNHRAYRLAVSKLSPPSIPFI
PLLLKDMTFIHEGNETHLNSLVNFEKMRMLAKTMKVMENCRSQVYIPTSPQKSRSDRVSA
ESAAVRISACSEQSLSLRSPIGIRLYVQNLRVIDNQRTLTQLSRTLEP
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgtacctgtttgacgggagcagcgataataatattaacatgcctttgtttcga
agccatgtgtaccatgtgcagccagaccgggtttcggcggagaccgacactatacgagga
atcagctggaccccgttgcctgagaatctggactctgctgaaaccctgaagcagttctcg
tcggagcgtgtgtggagagctggcagagtcctgcacagcgccttgctggagcacaccccc
tcgctgatcagagacaggaagcaccatctcaagacctacaggcaatgctcgtccggccgg
gagcttgttgattggctgatcaggctcagcgtctctgtccaatcacggagccaggcggtg
ggggtgctgcaggtgttgcttgacgagggcgtgcttgctcacgtcaagcaggagttgaac
ttccaggacagggactcgcagttctaccacttcccggaggcggagtctggagtggagccg
gcggccaatgagaaggagcgggaggaggagcttcaggagtccctgctgttgctgattcag
atggggcccgatgctctcctcactatgatcctgcggaaacctccaaaccagaggaccgct
gaggagctggaggtgatctttgaggagcttctgcacatcaaagccgtggcgcacctctcc
agctcagttcggagggagctcgcggctgtgctggtgttcgagtctcacgccaaggctggc
acggtcttgttcagccagggagacaaggggacctcgtggtacatcatctggaagggctca
gtgaacgtggtcacgcacgggaagggcttggtgaccacgcttcacgagggtgatgatttc
ggtcagctggccctggtgaacgatgccccccgagccgccaccatcatcctgcgcgaggac
cgctgtcacttcctgcgcgtcgacaagcacgacttcatccgcatcctgaaggatgtggag
gccaacacggtccggctggaggagcacgggaaggtggtgctggtgctggagaagagccct
agaggaggaccagccaatcagggagcttctgggaacagccacaaatacactgtgatgtct
ggaacccccgagaaaattctagaacacttactggaatctgtgcgcctggattccggctgc
agtgacctcacagagacctgcatgactgatttcctccagacccacaaggtcttcatgccc
acctcgctgctctgccctgccctgctgcaccactacctcgcggagccgagtgagggctct
gagctggagaaggctgcctattctctcaacaagaagcagaagatccttcgcctggtcggg
cagtgggtgtctctgtacggggagctgctgaaggaggatcccatcgccatggattttctg
gagaggctgaccgagggggtccagagtgactctcgcttgaccagcatgctgagggagcag
ctccaggaccacaggaagacccgaatatcggaaagcagctgccagacacctcccccggcc
caggccctgaactgtttaaactggtttgccaatccggaggagcacctaggcagctgccag
ccaatcagagcgcaggacagagtcctgcagaagtacttcagaccggaccacaccttcgtc
agcctcatgctgcccgtgaacgtctctgcgcaggaagtgatgtcatcgctggtgaacccc
ggggggaaccacgtcctggtgaagatgaactcgtctggagacaagctgcagttgaagctg
gatgccaccagggtgcacactgccctggggctgaatgagaggctcttcatctgcactgcc
gatcaggtcgacaagctgacccccctgagggagcagctcgggccggaggtgggcaccacc
gactccctcgagcagatgagctccaaggaccttgccagccagctcagcgactacgactgg
gagctcttcagctgcgtgcaccaggtggagctggtgtaccatgtcttcgggcagcacaag
ttccacggcgccacgacggcgaacctgcagagattcatgctgcgcttcaacgaggtgcag
tactgggtcgccacggagatgtgcctctgcagtgaaatgggcaggagagcccagctgctc
cggaaattcatcaagatcgccagcattctcaaagagcagaagaacctgaactccttcttt
gccgtcatgtttggactcgggaacagtgctgtgcgacggctgtctctgacctgggagaga
ctcccaaacaaaaccaaaaggatctactcagcctacgagaggttaatggacccctccctc
aatcacagggcgtaccgcctggccgtctccaagctcagccccccttccatccccttcata
cctctgctgctcaaagacatgaccttcattcatgagggcaacgagactcacctgaacagc
ctggtcaacttcgagaaaatgcgcatgcttgcaaagactatgaaggtcatggagaactgc
cggagtcaggtctacattccaacgtccccacagaagagccggagcgacagagtgtctgcg
gagagcgcagctgtgaggatctccgcctgttcggagcagtctctgtccctccggagccca
atcgggatccgtctctacgttcagaacctcagagtgatcgataaccagcggaccctgacc
cagctctcccgaacactggaaccctga
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