Polyodon spathula (Mississippi paddlefish): 121308891
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Entry
121308891 CDS
T07273
Name
(RefSeq) vitamin D3 receptor A-like isoform X1
KO
K08539
vitamin D3 receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121308891
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121308891
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121308891
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121308891
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121308891
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
121308891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121308891
NCBI-ProteinID:
XP_041097543
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MEAMTVSTSVSPADEFDRNVPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKAMFTC
PFSGSCTITKDNRRHCQACRLKRCVEIGMMKEFILTDAEVQRKKDMILKRKEEESQREAQ
REALQPRLTEEQSRVIALLLEAHRKTYDDSYSDFQQFRPPVRQGPVTRSVTRASSVYSLQ
NQSSEDSSDSFNPTYDPMDLKLFDSSSLLMSQSSSSSDSSLASQSISMLPHLADLVSYSI
QKVIGFAKMVPGFKELTADDQIALLKSSAIEIIMLRSNQSFSLDDMSWNCGSQDFKYRVD
DVTQAGHTMELLEPLVKFQVGLKKLCMHEEEHVLLMAICLLSPDRPGVQDRARIEVLQDR
ISEVLQAYIRARHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSISFQPEHSMQLTPLVLE
VFGNEVS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaatgacagtgagtacctcggtcagcccggcggacgagtttgaccgcaatgtc
ccgcggatctgtggggtgtgtggagacaaggccaccggctttcacttcaatgccatgacc
tgcgagggctgcaagggcttcttcagacgcagtatgaagcggaaggccatgttcacctgc
cccttcagcggcagctgcaccatcaccaaggacaaccgccggcactgccaggcctgccgt
ctgaaacgctgcgtggagatcggcatgatgaaggagtttatcctgaccgacgcagaggtc
cagcggaagaaggacatgatcctgaagcgcaaggaggaggagtcccagcgagaggcccag
cgagaggccctgcagcccaggctgacggaggagcagtccagggtcatcgccctgctgctg
gaggctcaccgcaagacatacgacgactcgtactctgacttccagcagttcaggccccct
gtgcgccagggcccagtcacgcgcagtgtgacccgcgcctcttcagtgtactctctccag
aaccagtcctctgaggactcctccgactccttcaaccccacctacgacccgatggatttg
aagctgtttgattccagcagcctcctgatgagccagtccagcagcagctcagactccagc
ctggcctctcagagcatctccatgctgccgcaccttgcagacctggtcagctacagcatc
cagaaggtcatcggcttcgccaagatggttcccggcttcaaagagctgacggccgacgac
cagattgccctgctcaagtcgagcgccatcgagatcatcatgctgcgctcgaaccagtcc
ttcagcctggacgacatgtcctggaactgcgggagccaggacttcaagtaccgggtggac
gacgtcacgcaggctggccacactatggaactcctggagcctctggtcaagttccaggtg
ggattgaagaagctctgcatgcatgaagaggagcatgtgctgctaatggcaatctgcctg
ctgtcccctgaccggcccggggtgcaggatagggctcggatcgaggttctccaggaccgg
atctcggaagtcctgcaggcctacattcgtgcgcgtcaccccggcggccgcctcctctac
gccaagatgatccagaagctggcggacctgcgcagcctaaatgaggagcattccaagcag
taccgcagcatctcctttcagcctgagcacagcatgcagctcacccccctggtgctggag
gtgttcggtaatgaggtgtcctag
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