Polyodon spathula (Mississippi paddlefish): 121309152
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Entry
121309152 CDS
T07273
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121309152
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121309152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121309152
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
121309152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
EGF
hEGF
Psg1
Motif
Other DBs
NCBI-GeneID:
121309152
NCBI-ProteinID:
XP_041097995
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MMVLPAGGLQSRRCLITALAAALVILNTARSGSAATTCSSNYFQCANGLCVTTRWICDGT
DDCGDGSDELEETCRAKTCKPDEFSCGGRLNQCVPSGWRCDYKPDCENGADEEDCAPKVC
SDDEFRCRDGRCISLQFVCDEDRDCEDGSDEDSCPAPTCGPDMFQCNNSVCIPWLWACDG
DSDCTDHSDESPQSCPGQAPPPSPCSSLEFHCGSGECVHVSWRCDGGNDCLDRSDEAHCP
MTTCRPDQFQCDDGTCIHGSRQCDKESDCKDSSDERGCANVTKCEGPAMFQCRSGECIHM
DKVCDKQRDCRDWSDEPIKQCGANECLKNNGGCSHVCNDLKIGFECLCPSGFRLLDRNRC
EDIDECENPDACSQICVNLQGGFKCECSEGYHMDPFTKDCKAIGTVAYLFFTNRHEVRKM
TLDRSEYTRLIPQLKNVVALDMEINANKIYWSDLSQKKIYSAHMDKAHNSSHHATVIGES
IQAPDGIAVDWVHGNIYWTDSQISTISVATTDGSRRKTLFMEGLTRPRAIVVDPLHGFMF
WTDWGTPAKIEKGGLNGVNRVTLVSEGIEWPNGITLDMLNQRLYWVDSKLHTLSSIDVQG
GNRRTVIMSENKLAHPFSLTVFEEKVFWTDIENEAIFSANRLTGGDIVAVAENVASPEDI
VLYHNLKQPTGVNWCTKSNLLNGGCEYLCLPAPQITRHSAKYTCACPDHMRLAADMSKCV
PEGEDPVTPTKAPTQPTTSTTKTRDASTTSPTTTTTSPASPKSSIEAGAGRISPPSDRAL
ITLSHQAQNGVNAEANTESHSSPTALYIVLPIVILCLVGFGAFLLWKNWKLKNTNSINFD
NPVYQKTTEDEIHICRTQEGYSYPSRQMVSLEDEEA
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgatggttttgccggcgggcgggttgcagagtcgccgctgcttgataaccgcgctggcg
gccgctttagtgatcctgaacacggcgagatcagggtcggccgccaccacctgcagctcc
aactacttccagtgcgcgaatggactgtgcgtgacgacccgctggatctgtgacgggacc
gacgactgcggtgatgggagcgacgagctggaggaaacgtgcagagcaaagacctgcaag
ccggatgagttcagctgtggggggcggctcaaccagtgtgtgccctccgggtggcgctgt
gactacaagccggactgcgagaacggcgcggacgaggaggattgtgccccgaaggtctgc
agtgatgacgaattccgctgccgcgacggcaggtgcatctcgctgcagttcgtgtgcgac
gaggaccgcgactgcgaggatggcagcgacgaggactcctgcccagctcccacctgcggc
ccggacatgttccagtgcaacaactctgtgtgcatcccgtggctctgggcttgcgacgga
gactccgactgcaccgaccactcggacgagtctccgcagagctgcccggggcaagccccg
cccccctccccctgctcctcgctggagttccactgcgggagcggggagtgcgtgcatgtg
agctggaggtgtgacggagggaacgactgcctggaccgctcggacgaagcccactgccct
atgacaacctgtcgcccggatcagttccagtgcgatgacgggacctgcattcacgggagc
cggcagtgcgacaaggaatccgactgcaaggactccagtgacgagcgcggctgtgccaat
gtaaccaagtgcgaggggccagcgatgttccagtgccgcagtggggagtgcatccacatg
gacaaagtgtgcgacaagcagagagactgccgggactggtctgacgagcccatcaaacaa
tgcggcgccaacgagtgtctgaaaaacaacggcggctgctcccatgtctgcaacgatctc
aagatcggcttcgagtgcctgtgcccctcgggcttccgtctgcttgaccggaacagatgc
gaagatatcgatgagtgcgagaacccggacgcttgcagtcagatctgcgtgaacctccag
ggagggttcaagtgtgaatgcagcgagggataccacatggacccctttaccaaggactgc
aaagccattggcaccgtggcttatctcttcttcacaaaccgccacgaagtgcgcaagatg
accctggaccgcagcgagtacacgagactcatccctcagctgaagaatgtggtggcgctg
gacatggagatcaacgccaacaagatctactggtcagacctctcccagaaaaagatctac
agcgcccacatggacaaggctcacaactcctcgcaccatgccacggtgattggcgagtcc
atccaggctccggacggcatcgctgtggactgggtccacggtaacatctactggacggac
tcccagatcagcaccatctccgtggcaaccaccgacggcagccgccgcaaaacgctgttc
atggaagggctgacccggccacgggccatcgtggtggacccactgcacggcttcatgttc
tggaccgactggggtacccctgcaaagatcgagaaaggagggctgaatggcgtcaatcga
gtcactttggtctcagaaggaatcgagtggcccaacggcatcaccttagacatgctgaac
cagaggctttactgggttgactcgaagctccacaccctgtccagcatcgatgtgcaggga
ggcaaccgaagaacggtgatcatgagcgagaacaagctggcccatcccttctccctcacc
gtctttgaggagaaggttttctggactgacattgaaaacgaagccatcttcagcgccaac
cgcctgacgggaggtgacatcgtggcagtcgcggagaacgtggcgtctcccgaagacatt
gtcctctaccacaatctgaaacaacccaccggtgtgaactggtgcacgaagagtaacctc
ctgaacggaggctgtgagtacctgtgccttcctgccccccagatcaccaggcactctgcc
aagtacacctgtgcctgccctgatcacatgaggctggctgcagacatgagcaagtgtgtg
ccagaaggggaggaccctgtgacccccacgaaggctcccacgcagcccacaacctccact
accaagacaagagatgcctccactacctcccccaccaccaccaccacctcccctgcctcc
ccaaagagcagcattgaagctggggctggcaggatctctccgcccagcgaccgggcgctg
atcaccctctcccatcaagctcaaaatggcgtgaatgctgaagccaacacagaaagccat
tcctctcccactgcactttatattgtattaccaatagttatcctgtgtctggttgggttt
ggtgccttcttgctgtggaagaactggaaattgaaaaacacaaacagcatcaacttcgat
aatcccgtctaccagaaaacaaccgaggatgagatccacatctgcagaacacaggagggc
tactcctacccatcgagacagatggtcagtctggaagacgaggaagcgtga
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