Polyodon spathula (Mississippi paddlefish): 121311262
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Entry
121311262 CDS
T07273
Name
(RefSeq) cis-aconitate decarboxylase-like
KO
K17724
aconitate decarboxylase [EC:
4.1.1.6
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
121311262
Enzymes [BR:
pspa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.6 cis-aconitate decarboxylase
121311262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MmgE_PrpD_N
MmgE_PrpD_C
Motif
Other DBs
NCBI-GeneID:
121311262
NCBI-ProteinID:
XP_041099827
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MLSALKFQRTPRHFSCLRLLHKSAVEVQERPAPEETVTSSFGGFIHSVHPGQLSDTVLHR
SKRMILDSIGVGLLGSTSHVFQLALQHCQQMYAPDYISSVFGRWHTRLSPSLAAFVSGVA
VHSMDFDDTWHPATHPSGAVLPALLAIAQMLPGNAKPSGMDLLLAFNVGIEIQGRLMRFS
NEAQNIPNRFHPPTVVGPLGSAAACSRLLSLDRSQCSNALAIAASLAGAPMANAATQSKP
LHIGNAARLGMEAALLASRGLEASTLILDSTPGCAGFSAFYNDYLPQALPSPEEQDPRFL
LEDQDLAFKRFPAHLGMHWVADAACSARELLVNTVGGFHPSMIQSILLRIPLSKYINRPF
PESEHQARHSFQFNACTALLDGEVSVQSFSPAFLDHPEVLSLLSRVRVEHPQDNPANFNK
MYAEVLLTLTTGNVLKGRCDTFYGHWRKPLSRDSLLKKFRANAGAVLPGERVDAIIDAVE
NIRAS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctctcagcactcaagtttcagagaactccaaggcacttttcctgcctgcgacttcta
cataaatctgcagttgaagtgcaggaaaggcctgccccagaggagacagtcaccagcagt
tttggagggttcatccactctgtgcacccgggccagctgtcagacactgtgctgcaccgc
agtaagaggatgatcctggacagcatcggggtggggctgctgggaagcacctcccacgtc
ttccagctggctctgcagcactgccagcaaatgtatgctccagattacatcagttcagtc
tttggtcgatggcacacaagactctctccgagtctggcagcctttgtcagtggagtagcg
gtccattcaatggacttcgatgatacctggcacccagccactcacccctcaggggcggtc
cttcctgccctgctcgctattgctcagatgttgcctggcaacgccaagcccagtgggatg
gacctcctgttagccttcaacgtgggcattgagattcagggccggctcatgaggttctcc
aacgaagcccaaaacatccccaacaggttccatcccccgactgtggtgggccctctgggt
agtgctgctgcctgctcccgtctgctctccctggatcgctcgcagtgctcaaacgccctg
gcgattgctgcctccctagcaggggctcccatggccaacgctgccactcaatccaaacct
cttcatatcgggaacgcagcccgactcggcatggaggcggcactgctggcttcccggggc
ctggaggccagcacgctgatcctggactcgaccccaggctgcgctggctttagtgccttc
tacaatgactacctgccacaggcactgccctccccagaggaacaggatccccgcttcctg
ctggaggaccaggacttagccttcaagcgcttccctgcacacctgggcatgcactgggtg
gcagacgcagcatgctcagcgcgggagcttttggtcaacaccgtaggggggttccacccc
tctatgattcagagcatcctactgagaatccccctctccaaatatatcaaccgtcccttc
cctgaatccgagcaccaggccagacactccttccagttcaacgcctgcactgctctgctg
gacggtgaggtcagtgtccagtcgttcagcccagcgttcctggaccaccccgaggtgctc
agcctcctgagcagagtacgggtcgagcacccccaggacaaccctgccaatttcaataag
atgtacgcagaggtgctgctgaccctcacaacaggcaatgtcttgaagggtcgttgcgac
accttttatggacactggaggaagccactgagtcgtgacagtctgctgaaaaagttccgg
gcaaatgctggggcagtcctgccaggagagagggtggacgccatcattgatgccgtggag
aacataagggcttcatga
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