Polyodon spathula (Mississippi paddlefish): 121312706
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Entry
121312706 CDS
T07273
Name
(RefSeq) matrix metalloproteinase-16 isoform X1
KO
K07996
matrix metalloproteinase-16 (membrane-inserted) [EC:3.4.24.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121312706
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M10
121312706
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
DUF3377
PG_binding_1
Astacin
Peptidase_M66
Metallopep
Peptidase_M54
Reprolysin_3
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
121312706
NCBI-ProteinID:
XP_041100330
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Position
3:10141039..10194592
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AA seq
607 aa
AA seq
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MIIFTFHTRRRFHCLYAWAFCWQTLFWILCAVSGEEQHFSVESWLQKYGYLPPTDPRMSV
LRSSQTMQAAITAMQRLYGINITGTLDRNTVDDLTLSWMKKPRCGVPDQLGGISRFSVRR
KRYALTGQKWHHKHITYSIKNVTPKVGETETRKAIRRAFDVWQNVTPLTFQEVPYSELES
GKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG
NDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFRLPNDDLQGIQKIYGPPDKIP
QPTRPLPTIPPQRSNPTLDPRKTNRQPKLPRPPSYPGAKPNICDGNFNTLAILRREMFVF
KDQWFWRVRNNRVMDGYPMQIAYFWRGLPSNIDAVYENSEGKFVFFKGNKFWVFKDTTIQ
PNYPQDLSMFGSGIPGQGIDTAVWWEDVGKTYFFKGDRYWRYNEEMKAMDPGYPKPITVW
KGIPDSPQGAFVDKENGFTYFYKEKEYWKFNNQKLRVEPGYPRSILKDFMGCDGSTDREK
ESHHPQDDVDIVIKLDNTANTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK
RSMQEWV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgattatatttacattccacaccaggagacggtttcattgtttgtatgcctgggcgttt
tgctggcaaaccttattttggattttatgtgccgtcagcggagaggagcagcatttcagt
gtagagtcctggttacagaaatatggctaccttccaccaactgaccctcggatgtctgtg
ttgcgctcctcacagactatgcaggctgctatcactgccatgcagcggctttatggcatt
aacatcacaggaacattggatagaaacacagtagatgatctcactttaagctggatgaag
aagcctcggtgtggagtgcctgatcagttaggaggaatctccaggttcagtgtccgaaga
aagcgctatgcactgacagggcagaaatggcatcacaaacatatcacttacagcataaag
aacgtcactcctaaagtaggagaaacggaaactcgtaaagccattcgccgtgcctttgat
gtgtggcagaatgtgacccccttgacatttcaggaagtcccatacagtgagctggagtct
ggcaaaagggacgtggacattacaattatatttgcttcgggtttccatggagacagttct
ccttttgatggtgaagggggatttttggcacacgcttattttcctgggccagggattggt
ggagacacacactttgactcagatgagccatggactttaggaaacccaaatcatgatgga
aatgatttgtttctggttgcagttcatgaactgggccatgccttaggccttgaacattcc
aacgatcccacagcaatcatggcccctttttaccagtacatggaaacagataatttcaga
ctgcctaatgatgatctgcagggtatccagaaaatatacggtccaccagacaagattccg
caacccacaagacctcttcccactatcccgccacagcgctcaaacccaaccctggatccg
cggaagaccaaccggcaacccaaacttccccggccaccttcttaccctggtgccaaaccc
aacatctgcgatgggaacttcaataccctggccattcttcgccgggagatgtttgttttc
aaggatcagtggttttggagggtgagaaataatagagtgatggatggctatcccatgcag
attgcatatttctggagaggcctcccttccaatattgatgctgtgtatgagaacagtgaa
gggaagtttgtgttcttcaaaggtaacaaattttgggtctttaaggacacaactattcag
ccaaactaccctcaagacctgtcaatgtttggcagtggaattccaggtcagggaattgac
acagcagtctggtgggaggatgttgggaaaacatatttcttcaaaggtgacaggtactgg
aggtataatgaagagatgaaggccatggacccaggttatcccaaacccatcactgtgtgg
aagggtattccagattctcctcagggagcttttgtcgacaaagagaacggcttcacatac
ttctacaaagagaaggagtactggaagtttaacaatcagaagctcagagtggaaccaggg
tacccacggtccatccttaaagacttcatgggatgtgatggatcaacagatagagagaaa
gaaagtcaccaccctcaggatgacgttgacatcgtgatcaaactggacaacacggcgaat
actgtgaaagccatagccatcgtcatcccctgcatactggccttgtgtcttcttgtcctg
gtttacactgtctttcaattcaaaaggaaaggcacacctcgccacatactgtactgtaaa
cgctctatgcaagagtgggtgtga
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