Polyodon spathula (Mississippi paddlefish): 121312788
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Entry
121312788 CDS
T07273
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A-like
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121312788
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pspa04050
]
121312788
04090 CD molecules [BR:
pspa04090
]
121312788
Cytokine receptors [BR:
pspa04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121312788
CD molecules [BR:
pspa04090
]
Proteins
121312788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
ECSCR
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
121312788
NCBI-ProteinID:
XP_041100486
LinkDB
All DBs
Position
3:17142769..17169727
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AA seq
615 aa
AA seq
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MDFTAKWIAQGWIMLVLLCQVNVYTKVAPMASSQCNSEREYLQDGKCCRKCKPGEYLSAR
CTKTSETNCKPCGEKQYQPYWNTDNRCMSQKICDKERGLQASQHENKTAPVKCECMPGFQ
CSIMDCEFCERVRVCGPGYGVIQGVNIHNNLCERCPHGSFSTVASATEPCKQWTDCKSLG
KTEIHHGNETEDVQCGPTATSLGTVIVCVVVVLLIILVSTFGICLVCNKNKMKGISEDFR
KIYTNVHGRTQQETTHPKENDSVLEVTLLLKNEEKPRDFLNACSTNDVLSEVTAPREPAA
RFSEPVEDETEESALNSEVDSAYHGPAPLASSSCSSCSCVSHLKRPVEAGEQDDFSQFVS
IGNSVSCVCRGNGTNSRPKSLHEVCYCSHCCGSITGSVDCEYKGDLQDSQRLSVDCCSCT
TREATLGEKDPSFGNHAGKTSSENRLNGHCCCSMDSMNDPVQSSLSDNGEGIPSDDCHTQ
RQNSNSKTPDPSSNSSSHNSDPPSASGNVTGNKNTTFISNGQVMNFSGDVIVVYVSQNSQ
TNTDRTEETFCSPVQEENSGGSSKDDTKQEQDDLPQVNVAYPLQEGTQRRKEGPVRNTTI
PIQEESTQWTQQKCV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggattttacagcaaagtggattgcccaaggatggattatgcttgtactgctgtgtcag
gtcaacgtttacaccaaggtagccccaatggcatcttctcagtgcaacagtgagcgcgag
tacctgcaggatggaaagtgctgcagaaagtgcaagccgggagagtacttgtcagctcgt
tgcacaaaaacatctgagaccaattgcaagccttgcggagaaaaacaataccaaccttac
tggaacacagacaacaggtgcatgtcccaaaaaatctgtgacaaagagaggggcttgcaa
gcatctcaacatgaaaacaaaacagcccctgtgaagtgtgaatgcatgcctggctttcaa
tgctcaatcatggactgtgagttctgtgaaagagtgagggtgtgcggcccaggatatgga
gtcatacagggagtaaatattcataacaatctatgtgaaaggtgtccccatggctcattc
tcaacagtcgcctcggcaacagaaccttgcaagcagtggactgactgcaagtctcttgga
aagactgaaattcatcatgggaatgagacagaggatgtgcaatgtgggcctacagctaca
tctttggggactgtgatagtatgtgtagttgtagttcttttaataatccttgtgtcaaca
tttggcatatgcctggtttgcaacaaaaacaagatgaaaggaatttctgaggattttcga
aagatctatacgaatgttcatggaaggacacagcaggagacaacacatccaaaggaaaat
gattctgtcctagaagtcacacttctgttgaaaaatgaagagaaaccacgtgactttctg
aatgcttgctcaaccaatgatgtattgagtgaagtcacagctccacgtgaaccagcagca
agattttctgaacctgtagaggacgagactgaagagagtgccttgaattctgaagttgat
agtgcataccatggccctgctcccttagcatctagcagctgcagttcatgtagctgtgtg
tcccatttaaaacgacccgtggaagcaggtgaacaggatgacttcagtcaatttgtttca
ataggaaactctgtgagctgcgtttgtagaggaaatggcaccaacagcaggccaaaatcc
ctccatgaggtttgctactgtagtcactgctgtgggagtatcacaggaagcgtggactgt
gaatacaaaggcgacttgcaggatagtcaacgtctttcagtggattgctgtagctgtact
acaagggaagccacgctgggggagaaagatcccagctttgggaatcatgctggcaaaacc
tcttcagaaaacaggttgaacgggcactgctgttgcagtatggactcaatgaatgaccct
gtccagtcttcactcagtgacaatggtgagggcattccctccgatgactgtcatacacag
agacaaaactcaaacagtaaaactcctgaccctagctcaaattcatcaagccataactca
gaccctccatctgcatctggaaatgtgacagggaacaaaaacaccacattcatatctaac
ggacaagtaatgaacttcagtggagacgtcattgttgtttatgtcagtcagaactcccag
acaaacactgacaggactgaggaaacgttttgctctccggtacaagaggagaacagtggg
ggtagttctaaggatgacaccaaacaggagcaggatgatctcccacaagttaatgtagct
tatccattgcaagagggaacacagcgcaggaaagaagggcccgtcaggaacaccacaatc
cctattcaagaggagagcacacagtggacacagcagaagtgtgtgtga
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