Polyodon spathula (Mississippi paddlefish): 121312966
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Entry
121312966 CDS
T07273
Name
(RefSeq) protein FAM83H-like
KO
K23931
protein FAM83H
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121312966
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121312966
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SACK1
PLDc_2
Motif
Other DBs
NCBI-GeneID:
121312966
NCBI-ProteinID:
XP_041100932
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All DBs
Position
3:complement(30597205..30634455)
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AA seq
1181 aa
AA seq
DB search
MARPSQCSSQGDNPLDPNYLEPHYREEYRLAIDALAEDDLAGYYHFLQNQGMPDFLAEPE
IKHIQQTLQVPHMAVQSDCLYLEGGFEDPDSSSGTYWPMHSDLDAPGLDMGWPNLRSFVG
PTEVTTLVNPPNPNTPSIKEQARRLIKSAQQVIAVVMDVFTDVDLFADILDAASRRVAVY
ILLDELNAHHFVAMVTHCKVNLELVNFMRVRTVAGITYFCRTGKSFKGQVMERFLLVDCR
AVLSGNYSFMWSFEKIHRCIAHVFLGELVATFDEEFRILFAQSQPLVLNNAMVPMPGERA
YGSTQHRSHMIAPPIMKSMHYLHTEGSLASQHSSYSFDRMDLDRDLPLHLRREDPFHNTM
EGSAMQIFNRKFKMEHSLMEPGRSMMTKKMELEAYKRHSFAEGTRESYSSSKQFMKQRVM
NNVEEMETQSSLFHKQQVYQIDRPLDHNRQEEPGSGHGIFEKIRSSRMGYQQMEDFPDDS
RFRVESQNVVGYQALLDYVPSSASREVKHGSGNRLVSGEGWQGKATQRSQNIGHTYACQM
SPTQKQPSDQNQLFHESSLDRQPQDSSVKKGLRKWRISSYLSAYQDSKEEGAQQPITELE
AFDDSSQPSEELFTGPEPSVPRFPTREAPKMPSFKPSEPPRFTRMIAPQIVKDSPASGST
SEIADETDSKELGEVALSKHESIRHRLNPMLQRSSRLRSSLIFSSSKQEQHSSSLLTQRE
QSIGESKEENDPFKPSMIISEILDKRRSITRAPFDFHLTDKSKASIKASPLVELQKVPPP
EEPQKVSPPEEPSEVPSAAPTKSMDMVNMNDPNVRLSVFKELAAKRKAAKTTVDSNSKVP
EPANKKPAVINNVPKPAKTPEPQPSTHKEVKQPSTQNKVKPAAEVFNTEHQALPAKLTEP
PLHKVSSQNIVITDATDSEKRELKRSCSQSSSSLARGESVEKLNKVHGSNTSLNLLDEKG
KQDPKAIEFLKKGSQKLKEFLGQKGDKKIGEEVAEVSEEQSSTDTKVESPEAVENKEDKT
RKSSQSAPPKSNQNRFISSTSNVLYSSNLRDDTKVILEQISANSQNRIEMAKQASNNKIE
SSDGSTLENNAQSVSRPEISLTKSRFQKPQTNPEERDKLIKKMDSMRREKRVYSRFEVFY
KNKEEAPKSEMDHDPEEDGKTDSSKESMIDKLKLGLFKNKK
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccctcccagtgctcatcgcagggggacaaccccttggacccgaactacctc
gagcctcactatcgcgaggagtaccgcctggccatcgacgcactggcggaggatgacctg
gcgggctactaccacttcctgcagaatcagggcatgccggacttcctggccgagccggag
atcaaacacatccagcagacactgcaggtgccccacatggctgtgcagtcagactgcctg
tacctggaaggaggcttcgaggacccggacagctcctcgggaacctactggcccatgcac
tcagacctggacgcccccgggctggatatgggttggcccaacttgcgtagcttcgtcggc
ccaaccgaggtcaccactctggtcaacccccccaaccccaacacgcccagcatcaaggag
caggcgcgccggctcatcaagtctgcgcagcaggtcattgccgtggtgatggatgtgttc
accgatgtggatctgtttgctgatatcttggacgctgcgtctcgccgcgtggcggtttac
atcctgctcgacgagctcaacgcacaccacttcgtagccatggtcacccactgcaaagtc
aatctggagctggtcaatttcatgcgggtgcggacggtggcaggcatcacctatttctgc
cgcactgggaagtcattcaagggccaggtgatggagcgattcctgctggtggactgcagg
gctgtgctcagcggaaactacagcttcatgtggtcgtttgagaagatccaccgctgcatc
gcacacgtgttcctgggggagctggtggccacgttcgacgaggagttccgcatcctgttt
gcccagtcccaacctttggttctgaacaacgcaatggtgccgatgcctggggagagggcc
tacggctctacccagcacagaagccatatgattgctccacctatcatgaagtctatgcat
tacctccacacggagggatccctggcctcccaacactcctcttactcctttgacaggatg
gaccttgatcgggacctgccactgcacttaagacgggaagacccattccacaacaccatg
gaagggtccgccatgcagatattcaacaggaagttcaagatggagcactccttaatggag
cccggcagatcaatgatgaccaagaagatggaactggaggcgtacaagaggcacagcttt
gcagaggggacacgcgagagctactcctcctccaagcagttcatgaagcagagggtaatg
aacaatgttgaagagatggagacccaaagcagcctcttccacaaacaacaggtctaccag
atcgacaggcctttagatcacaacaggcaagaggagccaggctcgggacacggcatcttt
gagaaaatcaggagcagccgcatggggtaccagcaaatggaagacttccccgatgactcc
aggttcagggtggaatcgcagaatgtggttggctaccaagccctgctggattacgttcct
tccagtgcttccagggaggttaagcatggctctgggaatcgactcgtttcaggggaaggg
tggcaagggaaggccactcagaggagccaaaacataggacacacttacgcctgccagatg
tccccaacacaaaagcagccctctgatcagaaccagctgttccatgagtccagcttggac
aggcaaccacaagattcctctgttaagaaggggctgagaaagtggaggatctcctcttac
ctcagtgcataccaagactccaaagaagagggtgcacagcagcctataacagagctggaa
gccttcgatgacagctcccaaccttcggaagagctgtttactggtccagagccatctgtc
cccagatttcccacaagagaggctccaaagatgccctcttttaagcctagcgagccccca
cgtttcacaaggatgattgctccacagattgtgaaagattctccagcttcagggtcaaca
tcagaaattgctgatgaaacagacagcaaggaactaggggaggtcgccctttcaaagcat
gaatccataaggcatagattgaaccctatgcttcagaggagctccaggttaagatcttca
ctgatcttcagttcatccaagcaagagcagcacagttcatcattgcttacccagagagag
cagtcaataggcgagtcaaaggaggaaaacgacccctttaaaccatcaatgattatttct
gagattcttgacaagaggagatccatcacccgggcgccttttgatttccatttgactgac
aagagtaaggctagcattaaggcttctcctctagttgaactgcaaaaggttcctccacca
gaggaaccacaaaaggtttctccaccggaagaaccgagtgaagttcctagtgcagcacca
acaaagagcatggacatggtcaacatgaatgatcccaatgtcagactttctgttttcaaa
gagttagctgccaaacgtaaagcagctaaaacaactgttgactcaaatagcaaagtgccg
gagcctgccaacaaaaagcctgcagttataaacaatgtacctaagccagctaaaacacca
gagccacagccttccacacacaaggaggtcaagcagccttccacacaaaacaaggtcaaa
cctgctgctgaagtctttaatacagagcaccaagccctgcctgcaaagttaactgagcct
cctcttcataaggtgtcctcgcagaacatagtcattactgatgctactgactccgagaag
agggagctgaaaaggtcctgcagccagagtagttcatccttggctcggggggagtcggtg
gagaaactgaacaaggtccacggctccaacacctcactaaatctcctggacgagaaggga
aagcaggatccgaaggccatagaattccttaagaagggatcccaaaagctcaaagagttc
ctcggacagaagggagataagaagattggtgaggaagttgcggaagtgtccgaggaacag
agttccacagacactaaggtggagagtccagaagcagtggagaacaaagaggacaagacc
cgcaagtcctctcagtcagccccacccaagagcaaccagaacaggttcatatcctccacc
tccaacgtgctctacagtagcaacctccgagatgacaccaaggtcatcctggagcagatc
tccgccaacagccagaacaggatagaaatggccaagcaggcttccaacaacaaaatagag
tccagcgatggttctaccttagagaacaatgctcagtctgtcagcaggcctgaaatctct
ctgaccaagagccggtttcagaagccacagaccaacccggaggagcgggacaagctcatc
aagaagatggacagcatgcgcagagagaagagggtctacagccggtttgaggtcttctac
aagaacaaagaggaagcgcccaaatcggagatggaccatgaccctgaggaggacgggaaa
acggacagcagcaaggaatcgatgatagataaactcaagctgggacttttcaaaaacaaa
aaataa
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