Polyodon spathula (Mississippi paddlefish): 121313579
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Entry
121313579 CDS
T07273
Name
(RefSeq) transmembrane protein 106B-like
KO
K25048
transmembrane protein 106B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121313579
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Others
121313579
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMEM106
TMEM106_N
RNase_E_G_Thio
LEA_2
Anti-TRAP
DnaJ_CXXCXGXG
MHC2-interact
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
121313579
NCBI-ProteinID:
XP_041102199
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Position
3:87640503..87649755
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AA seq
273 aa
AA seq
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MGKSFSHLPLYNKDDSCASPSDMSERNGSLQSEGHFKDGESADAYQFPYVEFTGRDSVTC
PTCQGTGRIPRSQENQLVALIPYSDQRLRPRRTKLYVTVSVMVCLLLSGLALFFLFPRSI
DVSYVGVKSAYVSYDQDRSIVYLNITSTLNITNNNYYSVEVANISAQVQFSKTVIGKSRL
SNATSIGPLDMTQIDYMVPTVIADELSYMYDYCTLPSIKVHNIVVMMQVTVTTAYFGHTE
QVSQERYQYVDCGGNTTYLRGHSKVVNVLQPPE
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtctttctctcacttgccactgtataacaaagatgacagctgtgcatctcca
tctgacatgtcggaacgcaatggatcgttacaatcagaaggtcactttaaagatggagaa
agtgctgatgcgtatcaatttccatatgtcgaattcactggacgggacagtgtcacgtgc
ccaacatgtcaaggaacaggaagaatacctagaagtcaggaaaatcagcttgttgcattg
atcccatacagtgatcagagactgagaccaaggaggacaaagctgtatgtgacagtttca
gtgatggtttgcctacttctttctggactggctctgttcttcctgtttccacgatccatt
gatgtatcctatgtaggcgttaagtctgcctatgttagttatgaccaagatcggagtatt
gtctatctcaacattacaagtaccttgaacataacaaacaataattactattctgtggaa
gtggcaaacatcagtgcgcaagttcagttctctaaaactgtaattggaaaatctcggttg
agcaatgctacttcaattggaccgctagacatgactcagattgactacatggtccctaca
gtgattgctgatgagttgagctacatgtatgattattgcacattgccgtccataaaagta
cataatattgttgtcatgatgcaagtaacggtgacaacagcatactttggccatactgag
caagtttctcaggaaaggtaccagtatgtggattgtggagggaacactacttacctgcgt
ggccattccaaggttgtaaatgtcctacagccaccagaatag
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