Polyodon spathula (Mississippi paddlefish): 121314516
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Entry
121314516 CDS
T07273
Name
(RefSeq) desmoplakin-like isoform X1
KO
K10381
desmoplakin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121314516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121314516
04147 Exosome [BR:
pspa04147
]
121314516
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121314516
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121314516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plectin
Spectrin_2
Spectrin_3
SH3_10
SR_plectin_7
Motif
Other DBs
NCBI-GeneID:
121314516
NCBI-ProteinID:
XP_041103815
LinkDB
All DBs
Position
4:complement(38508642..38536028)
Genome browser
AA seq
2735 aa
AA seq
DB search
MSRYGSETMLSSMGRRTNSRPDITSSFSQRSEGPRGNGQQEYHTEYALGREFYKGGGQQV
IGSQGDFLLRQSKIQEMIRVCSEKLKKAESFIQLDKRYAEAGQPPKYSNETDNYIEVANG
LVGRIDMNIRDMMQMGQNVEALQAGSIRLKEQLCAIHFAFNSIRKTYVIPRKSTGSWTDT
LASFQDAMAWIAQQKRFIETSPFGDDSSAIDKQIYTQKKFHSTLERAPEIQRARADAMGN
KAAMNALELEFDSLIKMSNERNDQLKQLQNIIEEISKEIMWVNEREEEELVYDWSNKNTA
IAKKQEDYSKLMSLLEEKEKHLNKLKQKVDVMLRNNHPASDKIEAYMDTLQTQWSWILQI
TKCIDVHLKENSAYFQFFDEAQATESHLKKRQETIRKQFQCDKNMSLPRIQDLIKDLEKE
KENMLEYRRQVRSLVTKSKNIVQLRPRNPDYKSSSPVIMKALCDFRQDQKTIHKGDEGIL
VDNSQRSKWQVTGPGGLEMMVPSVCLIVPPPNPLCTSIATKIDQYHEAILSICNQQYINL
KSLIAWKYCMIDIEKIRSLTITTLRTMRAEEYRLIIKNLEKHYQEFLRESRGSEVFGDED
KKQMQDSCSGATEYYEKLIIQLPNTTKPDKGIDNYTPETTRNSQVSQNLLSDLQKLRVRL
EYSESGMTQHIHIPLSEDIAKDCYNRITTLEGLQGELDKIRDDFMRIRESNLKQLSQIKD
PDTINFLNGEVAFINRKLTNLDSFSGSYLERLKALRALFQSMAQAEDTIKMYEARLTEEE
TISLDFSKVDAYRETLKQMRADVDQKRDLIKSMEDELQKAVYYNGQIDESFHKCDTDLSK
YREKAGQMSDRWCRIQTQIDNRYVDLESQLRQLKHYRGISETLSKWTDDTRRRQDTLEAT
RFDEPKVIMEQMNEQKALLTEIKSKRATVDEVQKNAELSASAIKDYELQLASYSAGLDTL
LKIPIKKTMLRSPSTVILQESADLQARYIELLTRSSDYYKFLGEMLKSMEELKMRNMKID
LLEEELKLAKDANLDNSNKNMFLDQNLSKYQSDCNEYREKLLSLESIKKKYELESSSAKQ
KLDSTYNQIKELNETITRLTYEIDEERRKRKLSEDRYSHHQEDYDLTVKKMKKDLDDLNW
QKMDIEKTVKDREREIERLKIQLQDEAARKREFEIEMSKVRNQHNQEINDLRKSYESETH
VTKTTIQQITMQKNEESRDFKLQLERALAEKRDLSEEVQRLKNSIADVELRWRKTEEAAN
QQKATCSDESRKRQEMEMEILTITKLRSEESLRYKESLQDALKAVQDKAKDIERLERLLE
EESRKRKELIIEIQTITKKQSDESLRYKESMQDTSKAIQDKVREIETLKQLLDEESRKRK
AAEWENDKLKQSQIDLQKKNTQYTETVQKLKISEQELNVVRVHLDKVSREKSRAEQDAAQ
FQNSLKEIQFRKEKLEDELAVHKKAALEESSRRKRLEDDLDQMRCACKEHTNTVNQLRLK
IEEVSIVKQRSEQNLKGQQESLDKTLKEKQQTIDELNLLTAELKALQRKFLLEQENVKEA
NQRNEQLYRTIEEKSKIVNDSKSEIDRLQSLTQNLTKKHLRLEEELRNLRKELDDVNMNK
DNCDSDKTALISELQLQLQTSSKRTLELQGLVNELSKEREKFRLEMEKFQKQTMESSNMI
HESQTHYNELMQEKEMLLVKIKMLDQDKTRLQKYEDELSRVKATLESESRLKLRLQDEYK
QLQNDFSYWKNQCEMKDELVRKYNLEKDKNERDRYSMKSEIDRLLAELKASDERYKRRLE
DAEREKSDLQSQHIKMEKEISTLRQTPVTCNCQTDSSKLVFDGIHRKITAKQLYDCKIID
KATLDQLLKGQKTVEEVALDIQPSLKGTGVIAGIFLTPKEKLSLTDAKNKNFLQSESAVM
LLEAQAATGYIIDPKVNEKLTVEAAYARGLVDREDKDKLLVAESAATGFHDPHSGKLISV
GQAKKKEMISRNTAIRLLEAQVAAGGVIDPVSSVFLPKDVALDRGLIDADLYRALTDPQV
DTMSFIDPATNKNISYPRLKEKCRVELHTGLLLLPAMKKKISFIGLREPVPLDELVDSGI
VDKDVASALEAGTITQDVVDEQARPYLQGSSSIAGIYDEINDRKLGIYQAMQEGLLRPGT
SLELLEAQAATGFMVDPVNNKLMTVEKAYNSGLIGREFKEKLLSAEKAVTGYKDPLTGNV
ISLFQAMKMGLIEKGHGIRLLEAQIATGGIIDPKASHRLKIDIAYKRGYFDEEMNEVLSD
PNDDTKGFFDPDTQENLTYLQLKERCIIDKVTGLCLLPLNKKKQITTTQKNTLRKRRVVI
VDPDTQKEMTVREAYHKDLIDYETFLELSGQECEWEEITITASDGTSRVVLVDRKTGIQH
DIQDSLDKGLIDKTSVEKYRSGSLTLTQFAGMISSKYTEKTAVSSSSSELVSRSSSVTSA
ASPSASQKRTSSMSLTLSSPSEQPEELSPIAAIFDTETLEKITVSEAIRRAIVDSITGQR
LLEAQACTGGIIHPANGKKLSLQEAERQGIIDHDMAQRLKPAEKAYLGFEDVKNKKKMSV
GDAIKEKWLPYESGQRFLEFQYLTGGLIEPDAPGRRSMQEVIRQGMVDGRTALKLQDTNN
YPRNLTCPKTKLKISYKDAMDRSMVEETTGLRMLEASSVSSKGISSPYNVSSAPGSRSGS
RAGSRTGSRSGSRRGSVDLSSSYSVSSYSSDYTGN
NT seq
8208 nt
NT seq
+upstream
nt +downstream
nt
atgagtagatatggctctgaaaccatgctcagttcaatgggaagaagaaccaattccagg
cctgatatcaccagctctttctcccaaaggagcgagggacccagaggcaatgggcagcag
gaatatcacactgaatatgcattgggaagggagttctacaagggtggaggccaacaagtc
atcggaagccaaggagatttccttctgcgccagagcaaaatacaggagatgataagagta
tgcagtgaaaaactgaaaaaagcagagtcatttatacagttggataagaggtatgctgaa
gctggacagcctccaaagtacagtaacgaaacagacaactacattgaagtggcgaatggt
ctagttggacgaattgacatgaatataagagacatgatgcagatgggtcagaatgtagaa
gcactgcaagctgggtctattcggttgaaagaacaattatgtgccattcactttgccttc
aatagtatccgaaaaacttatgtgattccaagaaagagtactgggtcatggacagacact
ttggcaagcttccaagatgctatggcctggatagcacaacagaagcgcttcatagaaact
tcgccatttggggatgactcctcagctatcgataaacaaatttacacccagaagaaattt
catagtacacttgaacgggctcctgaaatacaaagggccagagcagatgcgatgggtaac
aaagctgctatgaatgctctggagctagaatttgactccttgataaaaatgtccaatgag
agaaatgatcagcttaagcaactgcagaacatcattgaggaaatatctaaagagatcatg
tgggtgaatgagcgagaagaggaggagctggtttatgactggagcaacaagaacactgct
attgccaagaaacaggaggattactcgaaactgatgagcttgttggaggagaaggaaaaa
catctgaataaactcaaacaaaaagtcgatgtgatgctcagaaataaccaccctgcttct
gacaagattgaggcatacatggacaccctgcagacacagtggagttggattcttcagatc
acaaagtgcattgatgttcacctaaaggaaaattctgcctacttccagttctttgatgaa
gctcaggcaactgaaagtcacctcaagaaacgacaggaaactattaggaagcagttccag
tgtgacaagaacatgtccctgcctcgcatacaggatttaattaaagatctggagaaagag
aaagaaaatatgttggaatacagaaggcaggtccgcagtctggtgaccaaatccaagaac
attgtgcagctgaggcctcgtaacccagactacaaaagcagcagccctgtcattatgaag
gccctatgtgacttcagacaggaccagaaaacaatccacaaaggtgatgaaggaatcttg
gtagataattcacagcgtagcaagtggcaggtgactggtccagggggactggagatgatg
gttccttcagtttgtctcatcgtccctccccccaatccactatgtactagcattgctacc
aagattgatcagtaccatgaagccattttgtcaatttgtaaccagcagtatatcaacttg
aagagtcttatagcctggaaatactgtatgatcgatattgagaaaatccgctccttgaca
attactacgctccggacaatgcgtgctgaagagtatcgtctgattatcaagaacctggag
aagcactaccaagaattcttgagggaaagccggggctctgaggtgtttggtgatgaagat
aaaaagcagatgcaggatagttgcagtggtgcaacagaatactacgaaaaattgattata
caacttcctaacaccaccaaacctgataaaggtatagacaactatactccagagacgacc
aggaatagccaggtcagtcagaaccttctgtccgacctgcagaagcttcgtgtgcgtctg
gaatatagcgagtctggaatgacccagcacattcacatcccactgagcgaagacatagcg
aaggactgttacaacaggattaccactctggagggcctccaaggagaattagacaaaatc
agagatgatttcatgagaataagagagagcaatttaaaacaactttctcagattaaggat
cctgacaccataaactttctgaatggagaggttgctttcataaacagaaaactgacaaac
ctagattctttttctggatcctatttggaaagactaaaggcacttagggctctatttcaa
agtatggcacaagctgaagatactatcaaaatgtatgaggccaggctgacagaagaggaa
accatttctctggatttctctaaagtagatgcctacagggagacattaaagcaaatgaga
gcagatgtggatcagaaaagagaccttatcaagtccatggaagatgagctacagaaggct
gtgtattacaatggtcagattgatgagtcttttcacaagtgtgatactgacctttctaag
tacagagagaaagcgggccagatgtcagatcgttggtgtaggatccagacacagattgac
aacagatatgtggacttggagagccagttgagacaacttaaacactacagaggaataagc
gagacgctcagtaagtggactgatgatacccggcgtcgccaggataccctggaggccact
agatttgatgagccaaaagtcatcatggaacaaatgaatgaacagaaggctctgctcact
gaaattaaaagcaagagagccacagttgatgaggttcagaagaatgcagagttaagcgca
agcgcaataaaggattatgagctccagttagcgtcgtacagtgcaggcttggacacactg
ctgaaaatacctattaagaagacaatgttgcggtctccctcaactgtcatattacaagag
tctgcagatctgcaagcacgttatattgaactcctcacaaggtccagtgactactataaa
ttcctaggtgaaatgcttaaaagcatggaagagctcaagatgaggaacatgaaaattgac
cttttggaggaggagctgaagcttgccaaagatgcgaatcttgacaactccaacaagaat
atgtttctggatcaaaacctttctaaataccagtcagactgcaatgagtacagggaaaag
ctgctgtccctggagagtatcaaaaaaaaatatgaactggagagcagctcagctaagcag
aaactagacagcacttacaaccagatcaaggagctgaatgaaaccataacaaggctcact
tatgagattgatgaggaaaggagaaagagaaaactctctgaagataggtattcacatcac
caggaagactatgatctcaccgtaaagaaaatgaaaaaggatctggatgatttgaattgg
caaaagatggacatcgagaagactgtgaaggacagagagcgagagatcgaaaggctgaaa
atccagcttcaggacgaggcagcacggaagcgggaatttgaaattgagatgtcaaaggta
agaaaccagcataatcaagaaattaatgatcttaggaagtcttacgagtcagagacccat
gttacaaagacaaccattcaacaaataaccatgcaaaaaaatgaggaatcgagagatttt
aagctgcagcttgaaagagctctagcagaaaagagggacctttcagaagaagtacagaga
ttaaaaaactcaatcgcggatgtagagctgcgctggaggaaaactgaagaggctgcaaat
cagcaaaaagcaacttgttcagatgaatctaggaagagacaggagatggagatggagata
cttacaattaccaaacttcggtctgaagaaagcttgaggtataaagaatccttgcaggat
gccttaaaggctgttcaggataaagccaaggatattgagaggctcgaacgtttgttagaa
gaggaatcgagaaagaggaaagagttaattatagagatacagacaattaccaaaaagcaa
tctgatgaaagcttgaggtataaagagtccatgcaagatacttcaaaggcaattcaagac
aaggtcagagagattgagacactgaaacagttattagatgaggaatcaagaaagaggaaa
gccgcagagtgggaaaatgataaattgaaacaatctcaaattgatctgcagaaaaaaaac
acacagtacactgaaacagtacaaaaactaaagatatcggagcaagagctgaatgttgtt
agggttcatctggacaaggtatccagagagaaaagcagagccgagcaagatgctgctcag
tttcaaaacagcttaaaagaaatccaatttagaaaggaaaaactagaggatgagcttgct
gtgcataaaaaagctgctttggaagagagctccaggcgaaaaaggttagaagacgaccta
gaccaaatgagatgtgcatgcaaagaacataccaatacagtcaatcagctcagactgaag
attgaagaagtctccattgtgaagcaaagaagtgaacaaaacctgaagggtcaacaggag
tccttggataagaccctgaaggaaaagcaacaaaccattgatgaacttaacctcctgaca
gctgaactgaaagccttgcagcgcaagtttctcctggagcaggagaatgtaaaagaagcc
aatcagagaaatgagcaattgtacagaacaatagaagaaaagagtaagattgtgaacgac
agcaaatctgaaatagacaggctgcagtccctcactcagaacctcaccaaaaagcatttg
cggttagaagaggagctaagaaacctgagaaaggaattggatgacgtgaacatgaataaa
gataactgtgatagtgataaaactgctctgatttccgagctgcagcttcaactgcagaca
agcagcaaaagaacacttgagctccaggggctcgttaatgaattatcaaaggaaagggag
aagttcagactggaaatggaaaaatttcagaaacaaactatggagtcatccaacatgatc
cacgaaagtcagacccactacaatgaacttatgcaagaaaaagaaatgcttttggtgaag
ataaaaatgctggatcaggataagacaagactgcagaaatatgaagatgaactcagtcga
gtcaaagcaacacttgaatctgaatcccgtctgaagctgcgtctgcaagatgaatacaag
cagcttcagaatgactttagttactggaagaatcaatgtgaaatgaaagatgaacttgtt
agaaaatataatctagagaaagataagaatgagagggataggtactccatgaaaagtgaa
attgataggcttctagcagagctaaaagctagtgatgaaaggtacaagcgtaggcttgaa
gatgcagagagagaaaagtcagatttacaatcccagcacataaaaatggaaaaggaaatc
tctactcttcgccaaaccccagttacttgtaactgccaaacagattcttcaaaacttgtc
ttcgatggcattcacaggaagattacagctaaacagttgtatgattgcaagattattgat
aaagctacattggaccagttacttaaaggccaaaagacagtagaagaagtcgcactagac
attcaaccaagtctaaaaggtacaggtgtgatagctggcatttttcttacacctaaagaa
aagttgtcattaactgatgccaagaacaagaactttcttcaatcagaaagtgcagtgatg
cttctggaagcacaggctgccaccggctatatcattgatccaaaagtaaatgagaaactt
actgttgaggctgcatatgcaagaggtcttgtagatagagaagataaagataaacttctt
gtagcagagtccgccgctactggctttcatgatccacactcaggcaagctgatttccgtt
ggacaagcaaagaaaaaagagatgataagtagaaacactgcgattcgtttgttggaagca
caggttgcagcaggaggtgttattgacccagtcagtagtgtcttcctaccaaaagatgtt
gcacttgatcgtgggttaatagatgccgatctctacagagctctcactgatccacaagtt
gatacaatgagttttatcgatccagctaccaacaaaaatatcagttaccctcgtttgaaa
gaaaagtgtagagttgaactccatacaggtttacttttgctgccagcaatgaagaaaaag
atttcatttattgggctaagagaacctgttcctttagatgaactagtagattcaggaatt
gtagataaagatgttgcttctgctctggaagcaggtacaattacacaggacgttgttgat
gaacaggcaagaccatacttgcaaggctcaagttccattgcaggcatttatgatgaaata
aatgacagaaaacttggcatctaccaagcaatgcaagaaggccttcttagacccggaaca
agccttgaacttttggaagcccaagcagcaacaggttttatggtcgacccagttaataat
aagttgatgacagtggaaaaagcatataacagtgggttgattggtagggagttcaaggag
aaactcttatctgctgagaaggctgtcactgggtacaaagatccattaacaggaaatgta
atttccttgtttcaagccatgaagatgggattaattgaaaaaggccatggcattcgtctg
ttagaagctcagattgcaactggtggaatcattgatccaaaagctagtcatcgcttaaaa
attgatattgcatacaaacgtggttatttcgatgaagagatgaatgaagtcttgtctgac
ccaaatgatgacaccaaaggtttctttgatccagacactcaggagaatctgacttacttg
cagctaaaggaaagatgcataattgacaaggtaacagggctctgcctcctgccactgaac
aaaaagaagcagatcacaacaacccagaagaatacacttcgtaagcgcagggtggttatt
gtcgatcctgatacacaaaaagaaatgacagttcgtgaagcatatcacaaggatctgatt
gattatgaaacgttcttggagctctctggtcaagaatgtgagtgggaagaaataacaatc
acagcatctgatggtacatccagagtagtccttgtggacagaaaaacaggcattcagcat
gacattcaggattcattagataagggtttaattgacaaaacatcagtggagaagtatcga
tctgggagtcttacactcactcagtttgcaggtatgataagcagcaagtacactgagaag
accgctgtaagttctagtagcagtgagcttgtgagccggagctcatcagtgacatcagca
gcatcgccaagtgcctcacagaaacgtacctccagtatgtcgcttaccctttccagtcct
tcagaacagccagaggagctcagccctattgcagctatatttgatacggaaacattagag
aaaataactgtctctgaagctattcgacgagcaattgttgattccatcactgggcagcgt
ctgttagaagctcaggcctgtaccggaggcattatccatcctgcaaacggtaaaaaactt
tcactgcaagaggcagagcgccagggtattatagaccatgatatggcccaaagattgaag
cctgccgagaaagcatatctcggttttgaagacgtcaaaaataagaaaaaaatgtcagta
ggtgatgcaataaaagagaagtggttgccatatgaatctggtcagcgcttccttgaattc
cagtatctcactggaggccttattgaacctgatgctcctggaaggaggtctatgcaagaa
gtaatcagacaaggcatggtggatgggagaactgcattaaaacttcaagataccaataat
tacccaagaaacctgacttgtccaaaaaccaagctgaagatctcctacaaggatgccatg
gaccgatcaatggttgaagagacgactggtttgagaatgctggaagcttcatctgtgtct
tctaaaggcatcagcagtccttacaatgtttcttcagcacctggatctcgctcaggctcc
cgtgccgggtcacgcactggctcaagaagtgggtccagacgaggaagtgttgatctctcc
tcatcctattctgtctcatcttatagcagtgactatactggcaattag
DBGET
integrated database retrieval system
