Polyodon spathula (Mississippi paddlefish): 121315157
Help
Entry
121315157 CDS
T07273
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04943
potassium intermediate/small conductance calcium-activated channel subfamily N member 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121315157
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121315157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Motif
Other DBs
NCBI-GeneID:
121315157
NCBI-ProteinID:
XP_041105090
LinkDB
All DBs
Position
1:19308074..19373428
Genome browser
AA seq
736 aa
AA seq
DB search
MPVVLVRPTNRTRCLDSTGAEMGPSSPQQDFPIPTITHCAGCTARSPWCFNNSDMETPLQ
LQHDFFQEQQQQQHHQHYPHQYHCQDQEDQFLQQQDDPCFTCNNCPYGVEDNLILLRTSP
PLTGVFRTNSSPVSSSSHGSQLNVSEFTPSSHASSSRHHHHHHQYQQCHSRQQGSPASNS
RDSNPFTEIAMSSCRYNGGVMRPLSNLSSSRRNLHELDSESQPLQPIPTTAGAPEIVVSK
PEQHNSTNLVSYGSGGGGSSSGNNKSSKKKNQNIGYKLGHRRALFEKRKRLSDYALIFGM
FGIVVMVIETELSWGAYEKGSLYSLALKCLISLSTIILLGLIIVYHAREIQLFMVDNGAD
DWRIAMTYKRIFFLCLEILVCAIHPIPGNYKFTWTARLAFSYTLSTAIADVDIILSIPMF
LRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWI
IAAWTVRACERYHDNQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGA
GCTALVVAVVAKKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKNTKLVKKI
DHARVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLVDLAKTQNIMYDMISDLNERGEDF
EKRVVNLETKLETLIGSIQALPVLLSQTISQHQREFLEVQMQSHDKQAACSAERSQSLSR
QRRSSSTTPPTSSESS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgttttggtccgcccgaccaatcgaacgcgctgcttggattctacaggagcc
gaaatgggtccttcctcgccccagcaggacttccccatccctaccataacgcattgcgct
gggtgcactgcccgttccccctggtgctttaacaactctgacatggaaaccccattgcag
ttgcagcacgatttttttcaggagcagcagcagcagcagcatcatcaacactatcctcat
cagtaccactgccaggaccaggaagatcagtttctccagcagcaggacgatccatgcttc
acatgcaacaactgtccttatggtgtggaggataacttgattcttctgcggacttcaccc
cctttaacgggagtcttcaggactaattcatcgccagtctcctcttcaagccacggcagt
cagctaaacgttagcgagttcacgccttccagtcatgccagttcatccagacaccaccac
caccaccatcaataccagcaatgccacagtaggcagcagggtagccctgcaagcaacagc
agagatagtaacccattcaccgaaatagccatgagcagctgcaggtacaacggtggagtg
atgcggccgctaagtaaccttagttcttcccgcaggaacctgcacgagttggactctgag
tcgcagcctttgcaacccatccccaccactgctggcgccccagagatcgtggtttccaaa
ccggagcaacacaactccactaacctggtgtcctatggatcaggcggtggaggcagcagc
agtgggaataacaagtcgagcaaaaagaaaaaccagaacatcggctataaacttgggcac
aggagagcgctctttgagaaaagaaaacgactgagcgactatgctttgatctttgggatg
tttggaatagttgtcatggttatagaaactgaactttcatggggagcatatgaaaagggg
tcgctgtattcattagctctaaaatgccttattagcctttccacgataattctacttggt
ctgattattgtataccacgcaagggaaattcagttgtttatggtggacaatggtgcggac
gactggagaatagccatgacatacaagcggattttttttctctgtttggagatattagta
tgtgctattcatccgattcctgggaactataaattcacatggacagctcgccttgccttt
tcctacacgctgtccacagcaatagcggatgtggatattatattatcaataccaatgttc
ctaagactgtatcttattgccagagtcatgctgttgcacagcaaactttttactgatgcc
tcatcacgaagcattggagcactgaacaaaataaacttcaatacccgttttgtaatgaag
acattaatgacaatatgcccaggaacagtgttgttggttttcagcatctcattatggata
atagctgcatggaccgtccgagcttgtgaaagataccatgataaccaagatgtcactagc
aactttttgggagcgatgtggctaatttcaatcacatttctgtccattggatatggggac
atggtaccacatacatactgtggcaaaggggtttgtcttcttactggaattatgggagct
ggctgcactgctctggtggtagctgtggttgcgaagaagttagaactaactaaagctgaa
aaacatgtgcataattttatgatggacacgcagctaactaaaagagtgaaaaatgcagct
gccaatgtactcagggaaacatggttaatatacaaaaacacaaagttagttaaaaagata
gaccatgcacgagtgaggaaacatcaacggaaattcttacaggccattcaccaattaaga
agcgtaaaaatggaacaacgaaagctgaatgatcaagcaaacactttggtggacctggct
aagacacaaaatatcatgtatgacatgatttcagacttgaacgaaaggggtgaagacttt
gagaagagggttgttaacctggaaactaaactagaaacattaatagggagcatacaagct
ctccctgtactgcttagccagacaattagccaacaccagagagagtttctcgaagttcaa
atgcaatcccacgacaagcaagctgcctgcagtgctgagcgatcgcagtccttatccaga
caaaggaggtcctcttcaacaacaccgccaacttcatcagaaagtagctag
DBGET
integrated database retrieval system
