Polyodon spathula (Mississippi paddlefish): 121315174
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Entry
121315174 CDS
T07273
Name
(RefSeq) focal adhesion kinase 1 isoform X1
KO
K05725
focal adhesion kinase 1 [EC:
2.7.10.2
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04012
ErbB signaling pathway
pspa04148
Efferocytosis
pspa04370
VEGF signaling pathway
pspa04510
Focal adhesion
pspa04810
Regulation of actin cytoskeleton
pspa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
121315174
04370 VEGF signaling pathway
121315174
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121315174
09144 Cellular community - eukaryotes
04510 Focal adhesion
121315174
09142 Cell motility
04810 Regulation of actin cytoskeleton
121315174
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121315174
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pspa01001
]
121315174
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121315174
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
121315174
Protein kinases [BR:
pspa01001
]
Non-receptor tyrosine kinases
FAK family
121315174
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121315174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Focal_AT
Pkinase
FERM_N_2
FERM_C_FAK1
FERM_M
Kinase-like
Haspin_kinase
FERM_F2
GIT1_C
Motif
Other DBs
NCBI-GeneID:
121315174
NCBI-ProteinID:
XP_041105115
LinkDB
All DBs
Position
4:95006447..95191744
Genome browser
AA seq
1227 aa
AA seq
DB search
MAAAYLDPNLNHTLGSGAKSRLSMGMERSAGALDRVLKVFHYFESSNEPCNWASNIRHGD
ATDVRGIIQKIVDIHKVKCVSCYGLRLSHLQSEETHWLHPDMGVSHVRETYELNHPQDEW
RYELRIRYLPKGFLNQFTEDKPTLNYFYQQVKNDYMLETADQVDQDVALKLGCLEIRRFF
REMRGNALDKKSNYELLEKDVGLRRFFPASLLESVKAKTLRKLIQQTFRQFANLNDEQSI
LKLFEILSPVYRFDKECFKCALGSSWIISVELAIGPEEGICYLTDKGSTPTLLANFNQVQ
TIQYSNSEDKDRKGMLQLKVAGAPEPLTVTTPSLNIAENMADLIDGYCRLVKGASQSFII
RPQKEGERALPSIPKLGNNDKQGVRTRTVSVSGVNHSQPRVKKARHFLLPFIFCSHQSPP
KDEISGDETDDYAEIIDEEDTYTMPSKSCGLEEARDYEIQRERMELGRCIGEGQFGDVHQ
GVYMSSEDPSMSVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII
MELCTLGELRSFLQVRKYNLDLASLILFAYQLSTALAYLESKRFVHRDIAARNVLVSSTD
CVKLGDFGLSRYMEDSSYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMY
GVKPFQGVKNNDVIGRIENGERLAMPHNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLNT
ILEEEKAQQEERIRMEMRRQVTVSWDSGGPDEAPPKHSRCGRKEPPAQHLSSLSLLPPPE
ESFEVGPPGMLVPMRPRRRPSLPPLGPRNGPRHALPLCFDRLNLNLQRQLMSGGRRRRQP
SRPGYPSPRSSEGFYPSPQHVGQHNHYQVSGYSGSHGMPPMPGGVYPPQASVLDPHDSWN
HHRPQDIPMWSPNTEDSGPLDLRGVGQGLPTHLMEERLMMQQQQMEEDQRWLEQEERFLE
TGINTQPFSSCRWNSLLLALCTKAQRRSHKRNLKRMQVFKSCLGKPKPDPRNSRGSIDRE
DGGPQGPTGNQHIYQPVGKPEHVAPPKKPPRPGAPSHLGSLASLSPVDSYNEGVKPWRIQ
PQEISPPPTANLDRSHDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLL
ATVDETIPVLPASTHREIEMAQKLLNSDLAELINKMKLAQQYVMTSLQQEYKKQMLTAAH
ALAVDAKNLLDVIDQARLKMIGQARPH
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcttacctcgacccgaacctgaatcacaccctgggctcgggagccaagtcc
cggctgagcatgggaatggagcgctccgcaggggccctggaccgggtcctcaaggtgttc
cactacttcgagagcagcaacgagccctgcaactgggccagcaacattcgccatggggac
gccaccgacgtcaggggcataatacagaagatagtggacatccataaggtgaagtgcgtg
tcttgttatggcttgcgtcttagccacctgcagtccgaggagactcactggcttcatcca
gacatgggtgtgtctcacgtgagggagacgtatgagctgaaccacccccaggatgagtgg
aggtatgagctgcggattcgttatttaccaaaagggtttttaaatcaattcactgaagac
aagccaacactgaactacttctaccagcaggtaaaaaatgattacatgttggaaacagca
gatcaggtagaccaggacgtagctttgaagttgggctgccttgaaatcaggaggttcttc
agggagatgagagggaatgctctggataagaaatcgaactacgagctgttagagaaagat
gtaggcttgagaagattcttccctgcaagtttactggagtcagtcaaggctaaaacacta
cggaaattaatccaacagaccttcaggcagtttgccaacctcaatgatgagcagagcatt
ctcaaattatttgagattctgtcaccggtttacagatttgacaaggagtgttttaaatgt
gctcttgggtcaagctggattatctcagtggagctggcgattggaccagaagaaggaatc
tgctaccttacagacaagggctccactccgaccctcctggctaactttaaccaagtgcag
actatccagtattcaaacagcgaagacaaggatcggaaaggaatgctgcagctcaaggta
gcaggagcccctgaacctctaacagtgacaacgccatcgctgaatattgcagaaaacatg
gctgacctgatagatggctactgccggctggtaaaaggggcctcccagtccttcattatc
cgaccacagaaagagggagagcgagccttgccatcaatcccaaagcttggcaacaacgac
aagcagggggttcggacgcggactgtctcggtctcaggagtgaatcacagtcagcctaga
gttaagaaagccaggcactttctccttcctttcatcttctgttctcatcagtctccaccc
aaggatgaaattagtggggacgagacggacgactatgcagaaattatagacgaagaggat
acatacaccatgccctcgaaaagctgtggattagaagaagccagggactatgagatccag
agagagagaatggagctgggccggtgtatcggagagggacagtttggggatgtgcaccaa
ggcgtctatatgagttcagaagacccttctatgtcagtggctattaaaacatgcaaaaac
tgcacgtctgatagtgtacgggagaagttccttcaggaagccttgactatgcgacagttt
gatcatccccacatagtcaagctgattggagtgataacagagaacccagtgtggatcatc
atggagctctgtacacttggggagctgcggtcttttttgcaagtaagaaaatacaacctg
gacttggcctccctgattctgtttgcataccagctcagcacagcactcgcttacctagaa
agcaaacgatttgtacatagggatattgctgctagaaatgtcctggtgtcttccacagac
tgtgtgaagcttggagactttgggctctccaggtatatggaagacagctcctattacaaa
gcttccaaagggaaactgcctatcaagtggatggctccagaatcgattaactttagacgc
tttacctcagctagtgacgtgtggatgtttggagtgtgcatgtgggagatcctgatgtac
ggagtgaaacccttccagggtgtgaaaaacaatgacgtgatcggaaggattgagaacgga
gagcgcttggccatgccccacaactgcccccccaccctctacagcctcatgaccaagtgc
tgggcctacgaccccagcaagaggccccgcttcactgaactcaaagcgcagctcaataca
atactggaagaagagaaggcgcagcaggaggagaggatccgcatggagatgaggcggcag
gtcacagtctcgtgggactcgggagggcctgacgaagctccccctaaacactcccgctgt
ggccgcaaagagccgcccgcccagcacctgagctccctgtccctgctccctcctcccgag
gagtccttcgaggtggggcccccaggcatgctggtccccatgcggcccagacggaggccc
tcactgccccccttgggcccccggaacgggccacggcacgccctacctctctgctttgac
agactcaacctaaacctgcagcggcagctgatgtcaggaggcaggagaagacgccagccc
agcagaccaggctaccccagcccaagatcgagtgaaggattttaccccagtcctcagcat
gtggggcagcacaatcactaccaggtttctggatactctggctctcatgggatgcctccg
atgcctggaggtgtctatcctccccaggcctctgtgctggatccacatgactcctggaac
caccacaggccacaggacatccccatgtggtctcccaacacggaggactccgggcccctg
gatctgcgaggggtggggcaggggctccccactcacctcatggaggagaggctgatgatg
caacagcagcagatggaggaggaccagcgctggctcgagcaggaggagaggtttttggaa
acaggaattaatacacagcccttctcatcctgccgatggaattccttgctgctcgctctc
tgcaccaaagcacagcggcgctcccacaagagaaatttaaagaggatgcaggtcttcaag
tcctgccttggaaaaccgaagccagacccaaggaattccaggggcagcattgaccgggag
gatggaggtccccagggaccgactggcaaccagcatatataccaacctgtagggaagcca
gaacatgttgctcccccaaagaagcctcctcgacccggagctcccagccatttgggaagc
cttgccagcctgagcccagtggacagctacaatgaaggagtgaagccttggaggattcag
ccccaggaaatcagtccccctcctactgctaacctggaccgctcccatgacaaggtgtat
gagaacgtgaccgggctggtgaaagctgtgatcgagatgtccagtaaaatccagcctgct
cccccagaggagtatgtgcccatggtgaaggaggttggattggcgctacggacgctgctg
gcgacagtggatgaaaccattcctgtacttccagccagcacacacagagagattgagatg
gcccagaagctcctgaactcggacctggctgagctgatcaacaagatgaagctggcccag
cagtatgtgatgaccagcctgcagcaggagtacaagaagcagatgctgaccgcggcccac
gcactggccgtcgacgccaagaacctgctggacgtcattgaccaggcccggctcaagatg
attggccaagcccggcctcactag
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