Polyodon spathula (Mississippi paddlefish): 121315463
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Entry
121315463 CDS
T07273
Name
(RefSeq) dermatan-sulfate epimerase-like isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121315463
Enzymes [BR:
pspa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
121315463
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
Motif
Other DBs
NCBI-GeneID:
121315463
NCBI-ProteinID:
XP_041105511
LinkDB
All DBs
Position
5:complement(5315900..5355529)
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AA seq
956 aa
AA seq
DB search
MRTYTRGAPTVFFIHLICSLLALPVDENHGAGIPFQNGNYDGHPMLYFNKGEVEDLQLKA
QGTHRHIASKIQEAGQTMLATPKEYLPPWEPADFSARWNEIYGNNLGVLSMFCVLYPETT
GALELAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFSTAYDFLYNHLSKSQQHRFLEV
IANASRYMYDKSYSQGWGFQYLHNHQPTNCVALLTGSLVLMNQGYLQEAYLWTKQVFAIM
EKSLVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFDISHFDHPWIKQHFAFMYRT
ILPGFQRSVAIADSNYNWFYGPESQLVFMDNYIMRNGSGNWLAQMIRQNRVVEGPGLAGK
GQRWCTLHTEFLWYNASLAPMPPPDFERSRLHFFEDWGVVTYGSSLPAQINNTFLSFKSG
KLGGRAIFDIVHQNKYKEWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFL
NNALMFSPAVSESCFAPWEGQMTEACNSKWLKYKHGLAGDSQGRVLAALERKGMVFIRGE
GMSAYNPALKIRSVQRNLLLLHPQLLLLVDQIHLEEDSPVESASSYFHNTDMPFEETAIE
GVHGAFIRHKDGLYKMFWMDDTGYSDKGVLGYRDYPHGYPYNGSNYVNVTMPLKNSLTRV
AYIFFGPDVDVQSFSIRGDAQRVDIYLVANEHTYTVYLLTGEVVSKPLFAMVLADHQKIV
FERAAGVKDAPPPEVSNYLGLVEDNLQHVKPVFQQLEKQILARVLNTDNFRKTAERLLQF
SDKKKTEEVIEKMFTLSRKQGRAKNAGKGSLTNRFSESLPDIFAQIELAEKKQRQKSRKK
VHEENPEEGEGDARDFLDYSDLRRAKGRKVGYVKSLRYKEVPMDSIVRSTESTISASYIR
LFLILNIATFFLLLTLLLTQFQKTQSLHTQRCFYAILLIDCCILLCLYSSCSQAQC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagaacctatacccgcggggcaccaacagtgtttttcatacatctgatctgctccttg
ttggctctcccagttgatgaaaaccatggtgctggaattcccttccaaaatggaaattat
gacggccaccccatgctttacttcaataagggagaggtggaggacctgcagcttaaagct
cagggcacccaccgacacatagcaagcaagatccaggaggctgggcagaccatgctggct
accccaaaggaatacctccctccctgggaaccagcggattttagtgctcgatggaatgag
atctacgggaacaacctcggggtgctgtccatgttctgtgtgctttatcccgagaccaca
ggggcgttggagctggctaaagactacatggagaggatggcagctcagcctagttggttg
gtaaaagatgctccttgggatgaagtacctctagctcactcacttgttggattttctact
gcatacgactttctttacaaccacctgagcaaatcccagcagcacaggtttctggaggtg
attgccaatgcctccaggtacatgtatgacaagtcgtacagccaaggatgggggtttcag
tatctgcacaatcaccaacctactaactgcgtggccctattgacaggaagccttgtacta
atgaaccaagggtaccttcaggaagcctacttgtggaccaagcaagtttttgcaataatg
gagaagtcactggtactcctgcaagatgttactgatggatccttgtatgaaggagtggct
tatgggacctacaccaccagatccctctttcagtacatgttcctggtccagagacacttt
gacatcagccactttgaccacccctggatcaaacagcactttgccttcatgtatcgaact
atcttgccaggctttcaaaggagtgtggccattgcagactccaactacaactggttctac
ggacccgagagtcagctggtattcatggataattacatcatgcgcaatggaagcgggaac
tggctggcacagatgatccgtcagaatcgagtggttgaagggcccggtttggcagggaag
ggccaacggtggtgcacgcttcacactgagttcctctggtataatgcctctttggcgcca
atgccccctccagattttgaaagatcaagactgcacttctttgaagattggggagttgtt
acctatggaagctcactaccagctcaaatcaacaataccttcttgtccttcaaatctgga
aagctgggggggcgtgcaatatttgacattgtgcaccagaacaagtacaaagagtggatc
aaagggtggaggaacttcaatgctggtcacgagcacccagaccagaactcctttacattt
gcacccaacggcgtgcctttcataactgaagccctgtatgggccgaagtacactttcctg
aacaacgccttaatgttttcccctgctgtttccgagagctgctttgcaccatgggaaggt
cagatgactgaagcctgcaattccaagtggctcaagtataaacatgggcttgctggagac
tcacagggcagggtgctggcagctctggagaggaaaggaatggtatttattcgaggtgag
ggaatgagtgcctataaccctgctctgaagataaggagcgtgcagaggaacctgcttctt
ctgcaccctcagctattgctcctggtggatcaaatccacttagaggaagacagtcccgtt
gaatcagccagttcttactttcacaatactgatatgccctttgaggagacagcaatagaa
ggggtccatggagcctttattagacataaggatggattgtataaaatgttttggatggat
gacactggctacagtgataaaggagttctggggtacagggattatccacatggttaccca
tacaatggatctaactatgtgaatgtgactatgccactgaagaactcgttaaccagggtg
gcatacatcttttttgggcctgatgtggacgttcagagttttagtattcgtggggatgca
caacgagtggacatttatttggtggcaaatgagcacacatacacagtataccttctcacg
ggggaggtggtcagcaaaccactctttgccatggtgctcgctgaccatcaaaagattgtc
tttgagagggcggcaggtgtcaaggatgccccgcctccggaggtgagcaactatttgggc
cttgttgaagacaatctccaacatgtcaaacccgtcttccagcagctcgaaaagcagatc
ctggcccgtgttctgaacactgacaatttcaggaaaacagcagagcggcttctgcagttt
tcagacaagaaaaaaacggaagaagtcattgagaaaatgtttactctctcccggaagcag
ggcagagccaaaaatgctggaaaaggaagtctaacaaacagattttcagagagcctgcct
gacatttttgctcaaattgagttggctgaaaagaagcagaggcaaaaaagcaggaagaag
gtacatgaagaaaacccagaagaaggggaaggggatgcaagagatttcctggactatagt
gaccttcgccgtgcaaaaggcagaaaggttgggtatgtaaaaagtcttagatataaagaa
gttccaatggattccattgtgagaagcactgagtccacaatctcagcttcctacatcagg
ctcttcctgattttgaatattgccacattttttttgttgttgacattactcttgactcaa
tttcagaagacccaaagtctgcacacacagagatgcttctatgcaatccttttaatagac
tgctgcatcttgctgtgtttatattcctcatgctcacaagcacagtgttaa
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