Polyodon spathula (Mississippi paddlefish): 121315476
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Entry
121315476 CDS
T07273
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121315476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121315476
03036 Chromosome and associated proteins [BR:
pspa03036
]
121315476
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
121315476
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121315476
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121315476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_15
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
121315476
NCBI-ProteinID:
XP_041105526
LinkDB
All DBs
Position
1:20895186..20942083
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AA seq
585 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPVYIQHWQQLFPQSQLKTGALSQLQPHERADLPVESLRQRQTSI
SSASSSASIPSSASCTSTSLAGLTQLSVPQIALFGHSQCPEIPTSVLSGQSKELYSFSQC
KNDRGPRIKFTPEELDYYLYGQQRMEIIPLNNHTSDPNNRCDMCVDNRNGECPMHGPLHS
LRRLVGTSSSAASVPPPEIPEWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWIGPFQ
GVPQLLDKPQPGVGRNSRHMWEIYDQEGTLQHFIDGSEPSKSSWMRYIRCARHCGEQNMM
VVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPTSVMEAMSHQ
ETLQPFTKTSKGPSSVLLRSMVFPHTSCTRSFSLLDKPGQVESGFNQMNGKNQRVLASPT
STSQLSSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRESKPGITCLRSSNWKQMLV
YTPDGNLFQPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRT
HTGEKPFKCERCDRSFTQATQLSRHQRMPNECKPLMESTESIEVD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggtgaccccagcggatctgctttcttgaaggtagatccagtctacatt
cagcactggcagcagcttttcccgcaaagccaactaaagaccggagctctgagtcagctg
cagccacacgagagagcagatctcccggtagaaagtctccgccagcgccagacctccatc
tcctccgcctcctcctctgcttcaatcccatcatcggcgtcctgcacatccacctcgtta
gcagggttaacccagctgtctgtgccccagattgcactttttggacactcgcagtgcccc
gaaatccccacatcagtactcagtggtcaaagcaaagagctgtattcattttcccagtgt
aaaaacgacagaggaccaagaattaaattcacccccgaggagttagactactacctctat
ggacagcagagaatggaaattattcctttgaacaatcacaccagcgacccaaataaccgt
tgtgacatgtgtgttgataaccggaatggtgagtgccccatgcacggccccctgcactcg
ctgcggagactggtgggaacaagcagctcagctgcctccgtccccccaccagagatcccc
gagtggctgcgggatcttcccagggaagtgtgcctttgcaccagcaccgtgccaggactg
ggatatggaatctgtgcggcacagaggatcccgcagggcacatggattggtccctttcag
ggagttccacagctgctggacaaaccccaacctggagttgggaggaactcacgacacatg
tgggagatatatgaccaggaagggacattacagcactttatcgatggcagtgagcccagc
aagtctagctggatgaggtacatccgctgtgcaaggcactgtggggaacagaacatgatg
gtggttcaatacagatcatgtatattctatagagcgtgcatggacatcccccgtgggaca
gagttgctggtatggtacaatgacagctacacatccttctttggaattccactgcagtgt
atcgcacaagacgaaaatttgaacgtccctacatctgtaatggaagcaatgtcccatcag
gagacactacaaccctttaccaagactagcaaaggtccttcctcagtgctgcttcgctcc
atggtcttcccacacacctcgtgcactagaagcttctcacttttggacaagccaggccaa
gtagaatctgggtttaaccaaatgaatggcaaaaaccagcgggtccttgcaagtcctact
tcaacaagccaactgagctctgagttcagtgactggcatctctggaaatgtggtcagtgc
tttaagactttcacccagcgtatcctcctccagatgcatgtgtgcacacagaacccagac
agggagagcaagcctggaatcacctgtctgaggagttcaaattggaaacaaatgttggtg
tatactccagatggaaatctatttcagccttaccagtgcggccactgctcccagtccttt
tcccagccttcggaactccgaaatcatgttgtcacccattcgagcgacagacctttcaaa
tgtggctactgcggtcgcgcctttgccggagcgacaaccctcaacaaccacatccgtaca
cacactggggagaagccattcaagtgcgagaggtgtgaccggagcttcacgcaagccacc
cagctgagtcgacaccagaggatgcccaacgagtgcaagccattaatggagagcacagaa
tcaattgaagtggattaa
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