Polyodon spathula (Mississippi paddlefish): 121315552
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Entry
121315552 CDS
T07273
Symbol
cad
Name
(RefSeq) CAD protein
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00220
Arginine biosynthesis
pspa00240
Pyrimidine metabolism
pspa00250
Alanine, aspartate and glutamate metabolism
pspa01100
Metabolic pathways
pspa01240
Biosynthesis of cofactors
Module
pspa_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
121315552 (cad)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121315552 (cad)
00220 Arginine biosynthesis
121315552 (cad)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121315552 (cad)
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
121315552 (cad)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
121315552 (cad)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
121315552 (cad)
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
121315552 (cad)
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
121315552 (cad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
Amidohydro_1
ATP-grasp_3
RimK
DJ-1_PfpI
Peptidase_C26
GARS_A
GSH-S_ATP
Motif
Other DBs
NCBI-GeneID:
121315552
NCBI-ProteinID:
XP_041105671
LinkDB
All DBs
Position
5:11508172..11554995
Genome browser
AA seq
2244 aa
AA seq
DB search
MEVKMASLILEDGSVFSGRLFGAFTSVSGEVVFQTGMVGYPEALTDPSYKSQILTLTYPL
IGNYGIPKDEEEEYGLSKWFESSKIHVAALIVGENSQNPSHWSSALSLDQWLKEQGIPGL
EGVDTRCLTKKIREKGTMLGKLVLDGTSKESIAFDNPDKRNLVKEVSLKEPKVFNPSGSV
KIVAVDCGIKYNQIRCLCQRGASVTVVPWDYSLDSKEYDGLFISNGPGDPVFCKETIENI
RKVMYEENPKPVFGICLGHQLLSLAIRAKTFKMKYGNRGHNQPCIHEDTQRCFITSQNHG
FAVDPKTLPQDWSVLFTNANDKTSEGIVHNSKPFFSVQFHPEHMAGPTDLVSLFDVFLET
VQDAKLGKTGKTVKQRLTEHLTYSDAPKPGHFVRPHKVLILGSGGLSIGQAGEFDYSGSQ
AIKALKEENVQTVLINPNIATVQTSKGLADKVYFLPITPEYVTQVIKNERPDGVLLAFGG
QTALNCGVQLTKQGILEKYKVQVLGTPVASIEMTEDRKVFVEKMEEINEHVAPSEAAFSL
EQALAAAERLGYPVLVRAAFALGGLGSGFADNKEELNSLVTQAFAHTSQVLVDKSLKGWK
EIEYEVVRDAYDNCITVCNMENIDPLGIHTGESIVVAPSQTLNDHEYNMLRSTAIKVIRH
LGIVGECNIQYALNPESEQYFIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPAL
KNSVTNSTTANYEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQ
KALRMVDENCVGFDHTIKPHSDEELQTPTDKRIFVLAAALRAGYSVDRLYELTKINRWFL
HKMKNITDHTNILETFREEENKMLPEVLRKAKQLGFSDKQIAMAIQSTELAVRKLRHDWN
ILPVVKQIDTVAAEWPAQTNYLYLTYNGMEHDLGFAEPHVMVIGSGVYRIGSSVEFDWCA
VGCITELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFETVMDIYELENPDGVILSM
GGQLPNNIAMALHRQQCRILGTSPEFIDSAENRFKFSRMLDTIGISQPQWKELSELQSAK
QFCGKVEYPCLVRPSYVLSGAAMNVAYSDSDLEKYLNSAVAVSKEHPVVISKFIQEAKEI
DVDAIACDGHVIAIAISEHVENAGVHSGDATLVTPPQDINQKTMERIKAIVHAIGQELQV
TGPFNLQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVDLVALATQVIMGEEVEPVGLMKG
TGIVGVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNI
LLSIGSYKNKSELLPTVQALESLGYNLYASLGTADYYTEHGVKVMAVDWPFEEEENDSPL
KEKQRSIMDYLEENHFDLVINLSMRNSGGRRLSSFVTKGYRTRRLAVDYSVPLIIDIKCT
KLFVQALRQVGDSPPVKTHVDSMTSQKLIRLPGLIDVHVHLREPGATYKEDFASGTAAAL
AGGVTMVCAMPNTNPAIVDQSTLTLVQKVNAGSRCDYALFVGASSDNAAILPSIANGTAG
LKMYLNDTYSTLKMDNVSFWMEHFEKWPKHLPIVVHAEKQTVAAILMVAQLYQRPVHICH
VAKKEEIQIIRAAKQKGIQVTCEVAPHHLFLCEDNVHTLGLGKMQVRPMLGTREDMDALW
ENLDIIDCFATDHAPHSVEEKNGENPPPGYPGLETMLPLLLTAVSEGRLSVDDIIKRLYE
NPRTIFSLPIQENTYVEVDLEQEWTIPSQMQFTKSKWTPFEGMKVKGIVRRVVLRGEVAY
IDGQVLVPPGYGQDVRKWPLGMPALPSSQPVKEIVTPERHRPSMQTETIRARPPSPRRAA
AGESRFMIPPRIHRSSDPGLPPAEDANEKALRKSVEPAIAECSPWLDNYVHPPPLDRILS
PQNLASQSILHPQTSPLLYHFIGQHILSVQQFSKEQMSHLFNVAHNLRLMVQKERSVDIL
KGKVMASMFYEVSTRTSSSFSAAMQRLGGSVVHFSELTSSTQKGESLADSVQTMSCYADV
LVLRHPQPGAVESAAKLCRKPVINAGDGVGEHPTQALLDVFTIREELGTVNGMTITMVGD
LKHGRTVHSLAKLLTQYRITLRYVAPKNLHMPTEIIKFVAAKGIKQEEFDSIEEALPDTD
VLYMTRIQKERFASEAEYKACFGQFILTPHIMTRAKGKMVVMHPLPRVNEISVEVDTDPR
AAYFRQAENGMYIRMALLATVLGR
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaaaatggcttcacttattttagaagacggttcagttttcagcggccgactt
tttggagccttcacttcagtatctggtgaagttgtttttcagactggcatggtaggctat
ccagaggctttgacagacccttcatacaaatcccaaatacttactctcacataccccctg
atcggaaactatggcatacccaaagatgaagaggaggagtatggtctcagcaagtggttt
gaatcttctaaaattcatgttgcggccctcattgttggcgaaaactcccagaatcccagt
cactggagctctgctctctctctggaccaatggctaaaagaacaaggcattcctggactt
gaaggtgtggacaccaggtgcttgaccaagaagatccgagagaagggaaccatgctagga
aagcttgtgctggacgggaccagcaaggagagcattgcattcgataacccagacaagagg
aatctggtcaaagaggtctctttgaaggagccaaaagtgtttaaccccagtggcagtgtg
aagatagtagccgtggactgtggtattaaatacaatcagatccgttgcctttgtcaaaga
ggagcctctgttactgttgtaccctgggactactctctggacagtaaagagtatgatgga
ttgtttatcagcaatggccctggagatccagtgttttgcaaagagactattgaaaatatc
cgtaaggttatgtacgaggaaaatcctaaacctgtctttggaatctgcctgggacaccag
ctcctgtctctggccattagagctaagaccttcaaaatgaagtatggtaaccgtggtcac
aatcagccatgcatccatgaggatacccagcgctgcttcatcacctcacagaaccacggc
ttcgcagtcgaccccaagaccctcccccaggactggtcggtgctcttcaccaacgccaac
gacaagacaagcgagggaatcgttcacaactccaaacccttctttagtgtccagttccat
ccagaacacatggcagggccaacagaccttgtcagtctttttgatgtgtttttagagact
gttcaagatgcaaaactgggaaaaacaggcaaaacagttaaacagaggctgactgaacat
ctgacgtattcagatgctcccaaaccaggccactttgtgcggccacacaaggtccttatt
cttggctctggaggcttgtccatcggacaggcgggagagtttgattactctggatcccaa
gcaatcaaagccttaaaggaggagaacgttcagacggttcttataaaccccaacattgct
actgtacagacatcaaaagggctagcggacaaggtctacttccttccgattactcctgag
tatgtcactcaggtgattaaaaacgagcgtcccgatggggtcttgctggcatttggaggg
cagacagccctgaactgtggagtgcagctgacgaagcaggggatcctagagaagtacaaa
gtgcaggtcctgggcacccctgtggcctccattgagatgacggaggacaggaaggtcttt
gtagagaagatggaggagataaatgaacacgtagctcctagtgaggctgcattctccctt
gaacaggctctggctgcagcggagaggcttggttaccctgttctggtgcgcgctgccttt
gctctagggggactgggatctggatttgctgataataaggaggagctgaattctctggtg
acgcaggctttcgctcacacctcgcaggtcctcgtcgacaagtccctcaagggctggaaa
gaaattgagtatgaagtggtcagggatgcttatgacaactgcattacggtgtgtaacatg
gagaatattgatccccttggtatccatactggggagtctattgtggtggctcccagtcaa
accttgaatgaccacgagtacaatatgctgagaagcacggccatcaaagtcatccgtcac
ctggggattgtgggagaatgtaacatccagtatgctctgaatccagaatcagaacagtat
tttataatcgaagtaaatgcccgtctgtccagaagttcagctctggcgagtaaagcaact
ggctatcctctagcatatgtggccgccaagctggggttaggcatcccactgcctgcactt
aaaaactctgttacgaactccacgacagcaaattatgagcccagtctggattactgtgtg
gtgaaagttcctcgctgggatcttagtaagttcctccgtgtcagcaccaagattggaagc
tccatgaagagtgtgggggaggtgatggctataggtcgcagttttgaagaagcattccag
aaagctttgagaatggtcgatgaaaattgtgttggatttgatcacaccataaaaccacac
tctgatgaggaactacagacccctacagataaacgaattttcgtgttggctgctgccctt
agagctggttactcggtggaccgcctgtatgagctgaccaagatcaaccgctggtttctg
cacaagatgaagaacatcaccgaccacactaacatcttggagacattcagggaagaagag
aacaagatgcttccagaagtcctgcggaaggccaaacagcttggcttctcagacaagcag
atagcaatggcaatacagagcactgaactggctgtaagaaagctgcgtcacgactggaat
atcctccctgtggtgaagcagatcgatacggtggccgcagagtggccagcccagaccaac
tacctgtatctgacttacaacggcatggagcacgacctgggcttcgccgaacctcatgtg
atggtgatcggctcgggggtctaccgcatcggcagcagcgtggagtttgactggtgtgcc
gtgggatgcattacagagctgcgcaagatgggctacaaaactatcatggtgaactacaac
ccggagactgtcagtacagactacgatatgtgtgacagactgtattttgatgagatatct
ttcgagactgtaatggatatttatgaattggagaaccctgatggagtgatactgtctatg
ggagggcagcttcccaacaacattgccatggcactacatagacaacagtgcaggatcctc
ggcacctcaccggagtttatcgactcggcagagaacaggtttaaattctccagaatgttg
gataccatcggaataagccagccccaatggaaggagctctcagaattgcagtctgccaag
cagttctgtggaaaggttgaatacccctgcctagtccgtccctcctatgtcctgagtggg
gctgccatgaacgtggcctattctgacagtgacctggagaagtatctgaacagcgcagtg
gctgtatccaaagagcatcctgtcgttatctccaaattcattcaggaggcaaaggaaatt
gatgtggatgccatagcctgtgacgggcatgtgatcgccattgcaatctctgagcatgtt
gagaatgcgggtgtccactctggagatgccactctggtcacccctccccaggacatcaat
cagaaaacaatggagcggatcaaggccattgtgcacgccattggtcaggagctccaggtg
accggaccattcaacctgcagcttattgccaaggacgaccagctgaaggtgattgagtgc
aacgtcagggtctcgcgctccttcccttttgtctccaagacactgggggtggacttggtt
gctctggccactcaggtcatcatgggagaggaggtagagcctgtggggctgatgaaagga
actggcatcgttggagtgaaggtcccacagttttctttctcccgtctggctggagcggac
gttgtcctgggtgtggagatgaccagcactggggaggtcgcctgcttcggggagaataga
tatgaggcttacctcaaagccatgctgagcactgggttcaagatccccaaaaagaatatt
cttttgtctattggcagctacaagaacaaaagtgagctgctgcctacagtgcaagcactt
gagagtctggggtacaatctttatgccagtttgggtacagcagactactacactgaacac
ggagtcaaggtcatggcagtagactggccctttgaggaggaggagaatgatagccccttg
aaggaaaagcagaggagcatcatggactacctagaggagaaccactttgacttggtgatc
aacctgtccatgaggaactccggggggcgccgactgtcttccttcgtcaccaagggttac
cggaccagacggctggctgtcgactactccgtaccactgatcatcgacatcaagtgcacc
aagctctttgtgcaggcactgcggcaggttggagattctcctccagtgaaaacccatgtg
gattctatgacatcacaaaaactaattcgcctaccagggcttattgatgtccatgtccac
ctgcgtgaaccaggagccacctacaaggaggactttgcctctggcacagcagctgccttg
gcaggaggggtcaccatggtgtgtgccatgcccaacactaaccctgccatcgtagatcag
agcacgcttactctggtacagaaggtaaatgcaggttctcgttgtgattatgccctgttt
gttggtgcctcctctgacaacgctgccatcttgccttcaatcgcaaacggcactgctggt
ctgaagatgtacctgaacgacacttactctacgctcaagatggacaatgtctccttttgg
atggagcattttgagaagtggccaaagcacttgccaattgttgtccatgcagagaagcag
actgttgcagctatcttaatggttgcacaactgtaccagagaccagttcacatctgccat
gttgcaaagaaggaggagatccaaataatcagagctgctaaacagaaaggcatccaagtg
acatgtgaggtggccccccaccacctcttcctgtgtgaggataatgtacatacacttggg
ctgggcaaaatgcaggtacgccccatgctgggcacgagggaggacatggatgcactctgg
gagaacctggatatcattgactgctttgccactgaccacgctcctcattctgtggaagag
aagaatggagagaatcctccccccgggtacccaggcctggagaccatgctgcctctgctc
ctcacagccgtcagcgagggccgcctctctgtcgatgacatcatcaagcgcctgtacgag
aatccacgcacaatcttctctctgccaatacaggagaacacttatgtggaggtggaccta
gagcaggagtggaccattcctagtcaaatgcagttcaccaaatccaagtggacccccttc
gaaggaatgaaagtgaagggcatagtcagacgggtggtcctgaggggagaggtggcctac
atcgatggtcaggttctggtgcctccagggtatggccaggatgtgagaaagtggccttta
ggaatgcctgcactaccatcatctcagccagtcaaggagattgtgacaccagagcgccat
cgtccatcaatgcagactgaaactattcgagcccgaccccccagcccccggagagcagct
gctggggaaagccgcttcatgattcctcccaggatccaccgttcctctgacccaggactg
cctccagctgaagatgcaaatgagaaagccttgaggaaatctgttgaaccagcaattgca
gaatgttcaccttggctggacaactacgtgcacccccctcctctggatcgcattctgtcc
ccgcagaaccttgcgtctcaaagcattctccacccacagacttcccctttgctgtaccat
ttcataggacagcacatcctgtctgtccagcagtttagtaaggagcagatgtcacacttg
ttcaatgttgcccataaccttcgcttgatggttcagaaagaaagaagtgtggatatttta
aaaggtaaagtgatggcttcaatgttctatgaggtcagcacgcggaccagcagctccttc
tctgctgctatgcagcgtctggggggctctgttgtccatttctcagagttaacgtcctcc
acacaaaaaggggaatctctggctgactctgtgcaaaccatgagctgctacgcggacgtg
ctggtgttgcgccacccccagccaggggctgtcgagagtgctgccaagctttgtcggaag
cctgtgatcaacgctggagatggtgtgggggaacatccgactcaagccttgcttgatgtc
ttcacaatcagggaggagctgggcactgtcaacggcatgacgatcacgatggttggagac
ctgaagcatggacggaccgtccattccctggccaagcttctgacccagtacaggatcact
ctgcgctatgttgccccaaagaacctgcacatgcctacagagatcatcaagtttgtggcc
gcgaaaggaatcaagcaggaagagtttgatagcatcgaggaggctcttcctgacactgat
gtgctgtacatgacaaggattcagaaggagagatttgcttcagaggcagaatacaaggca
tgctttgggcagtttatcctgactccacacatcatgactcgagccaaggggaagatggtg
gtcatgcatcctttacccagagtgaatgagatcagtgttgaagtggacaccgaccctaga
gctgcttactttagacaagctgaaaacggaatgtacatcaggatggctttgttggcaaca
gtccttggaagataa
DBGET
integrated database retrieval system
