Polyodon spathula (Mississippi paddlefish): 121315990
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Entry
121315990 CDS
T07273
Symbol
xdh
Name
(RefSeq) xanthine dehydrogenase/oxidase
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00230
Purine metabolism
pspa00232
Caffeine metabolism
pspa00983
Drug metabolism - other enzymes
pspa01100
Metabolic pathways
pspa01232
Nucleotide metabolism
pspa04146
Peroxisome
Module
pspa_M00546
Purine degradation, xanthine => urea
pspa_M00958
Adenine ribonucleotide degradation, AMP => Urate
pspa_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
121315990 (xdh)
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
121315990 (xdh)
09111 Xenobiotics biodegradation and metabolism
00983 Drug metabolism - other enzymes
121315990 (xdh)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121315990 (xdh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121315990 (xdh)
Enzymes [BR:
pspa01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
121315990 (xdh)
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
121315990 (xdh)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of breast milk
121315990 (xdh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_1
FAD_binding_5
Ald_Xan_dh_C
Fer2_2
CO_deh_flav_C
Fer2
Motif
Other DBs
NCBI-GeneID:
121315990
NCBI-ProteinID:
XP_041106585
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All DBs
Position
5:45334851..45407736
Genome browser
AA seq
997 aa
AA seq
DB search
MPSDFISDDLVFFVNGKKIVEKNADPEMTLLTYIRRKLGLTGTKLGCGEGGCGACTVMIS
KYDHFQKKILHYSINACLAPVCSLHHTAVTTVEGIGSVTSRLHPVQERIAKAHGSQCGFC
TPGIVMSMYSLLRNTPQPAMEEIEEAFQGNLCRCTGYMPILDGYKTFANNSGCCGSKGKQ
NGCCLNKEETDEMYLQARLYDPSEFKPIDPTQEPIFPPELLLFDRLPSKQLQFKGERMVW
IQPCSLSGLLSLKAEYPDAKLVVGNTEIGIEIKYKNMLYPVILAPAYISELNIVQHTEEG
IIFGAACTLTLIGDVLRKAVSELPKHKTEVFQAVLEQLRWFAGQQIRNVAAVGGNIMTAS
PISDLNPVFMAAGCKLTLLSTGGKRVIKIDDKFFTGYRKTALKPQEILLSVEIPYTRQGQ
YFSAFKQASRREDDIAIVNCGMSVLFKEGTNVVKELLLSYGGMAPTTVLAGKTCGKLIDR
EWNEELLQEACCLLAEEMSLSPSAPGGMVVYRRTLTLSFFFKFYLTVQQKLIKDLGANNY
HAEHLPPGYASATELFHKDLPSSVQIFQAVPSGQSMEDVVGRPVVHLAALKQATGEAIYC
DDMPRYENELYLTLVTSTKAHAKITSIDTAEAMEMPGVVCFLSYKDIPGSNITGSVVMDE
TIFAEDTVTSVGHIIGAIVADTQAHSQRAAKAVKITYDELKRTITILDAIANKSFYQPIR
KIERGNIDKGFQEADHVVEGEMHMGGQEHFYLETHCTLAIPKGEDGEMELFASTQDATKT
QALVAKALGVPSNRIVCRVKRMGGGFGGKESRSTLLSTVVAVAAHKVRRPVRCMLDRDED
MLITGGRHPFLGRYKVGFLKTGQIVAVDVTYYSNAGSSRDLSMAIMERALFHMDNSYNIP
NIRGFGYVCKTNLPSNTAFRGFGGPQGMLIAECWLSDVAMKCGLPAEQVRKINMYKQGDV
TPYSQKLEQFTTDKCWEECLVLSNYHHRRKQIEEFNS
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagactttatatctgatgatctggtattctttgtaaatggaaaaaagattgtg
gaaaaaaatgcagaccctgaaatgaccttgcttacctacataagaagaaaattgggtctg
actggaaccaaacttggctgtggagaaggaggatgtggtgcctgcactgtgatgatctcc
aagtatgatcactttcagaagaagatacttcactattccattaatgcctgcttggcccca
gtttgttctctccatcacacagctgtcaccactgtggaaggaattggtagtgttaccagt
aggcttcatccagtccaggagagaatagccaaagcccatggctctcagtgtggattctgc
accccaggaattgtcatgtccatgtactccctcctgcggaatactccacagcctgccatg
gaggaaatcgaggaggctttccaagggaacttgtgccgctgtactggatatatgcctatt
ttggatggatacaagacatttgccaataattcgggttgttgtggcagtaaaggaaaacag
aacggctgctgtttgaacaaagaggaaacagatgagatgtatttacaagctcgattatat
gatccatcagagttcaaacccattgatcctacacaggagcctatttttccaccagaacta
ctgttatttgacaggttgccatcaaagcagctgcagttcaaaggtgaacggatggtgtgg
attcaaccctgctctcttagtggactgctgtctctaaaagcagagtaccctgatgccaag
cttgtggttgggaacacagaaattggaattgaaattaaatataagaacatgctgtatcca
gtgattctagccccagcatatatttcagaactgaacattgtccagcacactgaagaaggt
attatatttggagctgcctgcacattgactctgattggagatgtccttcggaaagcagtg
tctgaactcccaaagcacaagaccgaagtgtttcaagctgttttggagcaactgaggtgg
tttgctgggcagcaaatcagaaacgttgcagctgtaggtggaaacataatgacagctagt
ccaatctctgatcttaacccagtcttcatggcagctggttgtaaattgacactgctatca
acaggtggtaaaagggttatcaagatcgatgacaagttttttactggctaccggaagact
gccctaaagcctcaggaaatactgttgtcagttgaaattccatacacaagacagggacag
tatttttcagctttcaagcaggcctctcgacgtgaagatgacattgccatagtaaactgt
gggatgagtgtcctgtttaaagagggcacgaatgtggtaaaggagctcctgttgagctat
ggaggaatggcaccaactacagtcctagcagggaagacatgtggaaagcttattgacaga
gagtggaatgaggagcttctgcaggaagcctgttgcctgttggccgaggagatgagcctg
tctccttcagctcccggggggatggtggtgtaccggcgcacactgacactcagcttcttc
ttcaagttctacctgactgttcaacaaaaactgatcaaggatcttggggctaataactat
catgctgaacacttacctccaggctacgctagcgctacagagttgttccataaagatctt
ccatccagtgtccaaattttccaggctgtgccctccggacagtctatggaggatgtggta
gggagaccagttgtacatctggcagctctcaaacaagccactggcgaggccatttattgt
gatgacatgcccagatatgaaaatgagctttacttaacactggttacgagcaccaaagct
catgccaaaatcacctccattgatacagcagaagccatggaaatgcctggagttgtgtgt
ttcctgtcctataaagacattcccgggagcaacataacaggatcagtggttatggatgaa
acaatctttgctgaagacacggtaaccagtgttgggcacattataggggcaattgttgca
gatacacaagcccatagtcaaagagctgccaaggctgtaaagatcacatatgacgaactt
aaaaggactatcactattctggatgcaattgcaaataaatcattttatcaacctataaga
aagatagaaagagggaacatcgataaaggatttcaagaggctgaccatgtagtggaaggg
gagatgcacatgggaggacaggaacacttctatctggaaactcattgcactttggcaatt
cccaaaggagaagatggagaaatggaattgtttgcatcaacccaggatgctacgaaaaca
caggcccttgttgccaaagccttaggagtcccatcgaatcgaattgtctgccgggtgaag
agaatgggaggggggtttggagggaaagaatccagaagcaccctcttatctactgtggtg
gctgtagcagcacataaggttaggcgccctgtgcgatgtatgctggatcgtgatgaagac
atgcttataacaggtggaaggcatccatttttggggcgctataaggttggctttctgaag
acggggcaaatagttgctgttgatgtaacgtactatagcaatgctggaagctccagggat
ctttcaatggctatcatggagagagctttgtttcatatggataattcatacaacattccg
aacatcagaggctttggctatgtctgcaaaaccaacctgccttcgaatacagccttccgc
ggcttcggcgggcctcaggggatgctgatcgcagagtgctggctgagtgatgtggctatg
aagtgtggtcttcctgctgaacaggtccgtaagataaacatgtataagcaaggagacgtg
accccgtattctcagaagctggaacagtttacaacagacaagtgctgggaggagtgcctg
gttctctccaactatcaccaccgaagaaagcagatagaagaatttaacagctga
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