Polyodon spathula (Mississippi paddlefish): 121316092
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Entry
121316092 CDS
T07273
Name
(RefSeq) presenilin-2-like
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121316092
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121316092
Peptidases and inhibitors [BR:
pspa01002
]
Aspartic peptidases
Family A22: presenilin family
121316092
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GFIT
Motif
Pfam:
Presenilin
DUF6541
Motif
Other DBs
NCBI-GeneID:
121316092
NCBI-ProteinID:
XP_041106793
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Position
5:complement(57813342..57834000)
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AA seq
450 aa
AA seq
DB search
MNTSGSEEEFCNERTSLMTTESPPLSSHHVETGIPSLEDTQTKRRRPVTNHSNNREARHE
GVSVERDSTADSEDEEMSLKYGAKHVIMLFVPVTLCMIVVIATIKSVSFYTEKGGQLIYT
PFTEDTTSVGQRLLNSILNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLILSSLMLLFL
FSFMYLGEVFKTYNVAMDYPTVALVIWNFGAVGMVCIHWKGPLQLQQAYLIMISALMALV
FIKYLPEWSAWVILGAISVYDLIAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMIWMV
GMTEQSAVQQPSHQETNSDEEVGQSHHNNTEEDRHMVVPETEVHGAQSRTTSAVQLEEER
GIKLGLGDFIFYSVLVGKASATASGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPI
SITFGLVFYFSTDNLVRPFMDNLAAHQFYI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatacctcgggcagtgaagaggaattttgcaatgaaaggacttctttgatgacaact
gagagcccccctttatcttcacatcatgttgagactggaataccaagcttggaggataca
cagaccaaaaggcgtcgtccagtcacaaaccacagcaataacagggaagcacgccatgag
ggtgtatctgtagagcgggactccactgcagacagcgaggatgaggagatgtccctcaaa
tacggggccaaacacgtcatcatgctgtttgtccccgtcactctctgcatgatcgtggtc
atcgctactattaagtcagtcagcttctacactgagaagggtggacagttgatttatacg
ccttttacagaagacacaacgtctgtgggacaacggcttctcaattcaattttaaacaca
ctgataatgatcagtgtcattgttgttatgaccatatttcttgttgtgctttacaagtac
cgctgttacaagtttatccatggatggctgatcctctcctccctaatgctccttttcttg
ttcagctttatgtacctaggagaagtgtttaagacctacaatgtggcgatggattaccca
accgtggctcttgtcatctggaatttcggggcagtggggatggtctgtattcactggaag
ggccccctgcagcttcagcaggcctatctcatcatgatcagtgctctgatggccttggtc
ttcattaaatacttacctgagtggtctgcgtgggtcattctgggagccatctctgtttac
gatttgatagcggtgctctgtccgaagggacctctgagaatgctggttgaaacagctcag
gagagaaacgagccaatttttccagctttgatttactcctcggcaatgatctggatggtt
ggaatgacagaacaatcagctgtgcagcagccttcccaccaagaaacgaactcggatgaa
gaagtaggccagagtcaccataacaacacagaagaagaccggcacatggtggtgccagag
actgaggtgcatggagcacaaagcagaacaacatcagcagtgcagctggaggaagaaaga
gggatcaagcttggactgggggactttatattctacagtgtcttggtggggaaagcttca
gccacagccagcggagactggaatacaacactggcctgctttgtggctattctaatcgga
ctttgccttaccctgctattgctggctatcttcaagaaggcattgcctgcccttcccatc
tccatcacctttgggcttgtcttctatttctccactgacaaccttgtccggccattcatg
gacaacctcgccgcccaccagttttatatttaa
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