Polyodon spathula (Mississippi paddlefish): 121316243
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Entry
121316243 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/LRR-repeat protein 4-like
KO
K10270
F-box and leucine-rich repeat protein 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121316243
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121316243
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121316243
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121316243
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_4
F-box
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_8
LRR_14
F-box_4
Motif
Other DBs
NCBI-GeneID:
121316243
NCBI-ProteinID:
XP_041107117
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Position
5:complement(70082101..70099596)
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AA seq
618 aa
AA seq
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MFPLITVLSMFYYICLQHXARTGTRGEIMNGRRTTEFNQRMLPLSVEVEQYAKEVVDFSS
HYGSENSMSYTMWNLAGMPSVYPSSGDFTQAAVFRMYGKWWEQCASAPQPFRRRPDRFHS
QDYVELAFEEPVYPTSIDILETYHPGAVIRILACSFNPFSQNLPAEERWNIIWGPKILKM
VTAQARQFSPCIKQINFPTNLIRLEINSSLLEYYAELDAVVLRGVKERSLLSLYKMALVD
INDLSDSDEEKDAYEVERLCKQCEDTGINEHANNGYFDKLPYELIQLLLDHLTLPDLCRL
AQTCKLLYQHCCDPLQYIQLNLQPCWARVNDAALDHMQSRCTLIQRLNLSWSGNRGAITL
AGFGRFLKVCGSQLVCLELACCHFLNEVCLEVVGQMCPNLQELNLSSCDRVHPQAFSHIS
KLVGLRRLVLYRTRIEQTALLSILTFCTDLRHLNLGSCIMIEDYDVIASMISAKSKNLKS
LDIWRCKNITEKGITELASGCRLLEELDLGWCSTLQSSTGCFVHLARHLPNLCKFFVTAN
RTVCDTDVEELAASCPNLQHVDLLGTRMVSPASLRKLLQSCKDLLLLDVSFCSQIDTRVV
QELTVQFPKVFIKKSFTQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctttaataacagttctcagcatgttttactatatctgccttcagcactgagcc
aggacagggacaagaggagagatcatgaacggtcgccgaaccactgaattcaaccagcga
atgctgcctctctctgtggaagtggaacagtatgccaaagaagtcgtcgacttcagttct
cactatggcagcgagaacagcatgtcttacaccatgtggaacttggctgggatgcccagt
gtctaccctagttctggcgatttcacacaggcagcagtttttaggatgtacggtaaatgg
tgggagcagtgtgccagtgcgccccagccctttcgaaggagaccggataggtttcacagt
caggactatgtagagctggcttttgaagagcctgtttaccccacgtccattgatattctt
gaaacctaccaccctggagctgttattcggatccttgcctgctcgttcaaccctttctct
cagaatctaccagcagaagaaaggtggaatataatttggggtcctaaaatactaaaaatg
gtcacggctcaagctcgtcagttttcaccgtgtatcaagcaaataaacttccctaccaac
ctaatacgtttagaaatcaacagctcactgctggaatattacgctgagctggatgctgtt
gttctacgtggagtgaaggagaggtctttgctgtccctgtacaagatggcactggtagac
atcaacgatttaagtgacagtgacgaagaaaaggatgcttatgaagtagaaagactatgt
aagcagtgtgaagacacaggcattaatgaacacgccaataatggttactttgataaactt
ccctacgagttgattcagctgcttttagatcacctcaccctcccagacctgtgcaggctg
gcacagacctgtaagctgctgtaccagcactgctgcgaccccctgcaatacatccagctg
aatttacagccatgctgggcacgggtgaatgacgccgctcttgaccacatgcagtcgcgt
tgcaccctgattcagagactcaatctgtcatggagcggaaacaggggagcaattacttta
gcggggttcggcaggttcttgaaagtgtgtggctcccagttggtgtgccttgagttggca
tgctgtcatttcctgaacgaggtctgtctggaggttgttggtcagatgtgcccgaacctt
caggaactgaacctctcctcctgtgatagagtgcatccgcaggctttcagccacatttcc
aaactggtcggcttgagacgtctcgtactgtaccgcacaagaattgagcaaacagcgctg
ctcagcattctgactttttgcacagatcttcggcaccttaaccttggcagctgtatcatg
attgaggattatgacgtgattgccagcatgataagtgcaaagagcaaaaatttaaaatcc
ttggatatctggaggtgtaaaaacattacagagaaaggcatcactgagttggcgtcaggg
tgcaggttactggaagagctggacctcggctggtgctccacactgcagagcagcactggc
tgcttcgtgcatctggctcgccaccttccaaacttatgcaagttttttgtcacagcaaac
aggactgtgtgcgacacagatgtggaggagctggcagccagctgcccaaacctgcaacat
gtagaccttctgggaactagaatggtgagcccagcatcattgagaaagctgctccagtcg
tgcaaggatctcctcctgctcgatgtgtccttctgttcccagattgatacccgagtggtg
caagagctgactgtccagtttcccaaagtgttcatcaaaaaaagctttacccagtga
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