Polyodon spathula (Mississippi paddlefish): 121316739
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Entry
121316739 CDS
T07273
Symbol
mtr
Name
(RefSeq) methionine synthase isoform X1
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00270
Cysteine and methionine metabolism
pspa00450
Selenocompound metabolism
pspa00670
One carbon pool by folate
pspa01100
Metabolic pathways
pspa01230
Biosynthesis of amino acids
pspa04980
Cobalamin transport and metabolism
pspa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
121316739 (mtr)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
121316739 (mtr)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
121316739 (mtr)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
121316739 (mtr)
04980 Cobalamin transport and metabolism
121316739 (mtr)
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
121316739 (mtr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-GeneID:
121316739
NCBI-ProteinID:
XP_041107811
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Position
6:complement(7183053..7208674)
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AA seq
1315 aa
AA seq
DB search
MAPTIHEPSQAAGDVKLSLEDEIRELLKQRIMVLDGGMGTMIQQHTLEEDDFRGEEFKNH
LKSLKGNNDLLSITQPDIIYKIHCEYLLAGADFIETNTFSSTSVAQADYGMEHLAYRLNK
VSAELARKAADNVTAQTGIKRYVAGAVGPTNKTLSVSPSVERPDYRNITFEELVETYTEQ
TTGLLDGGVDVLLVETIFDTANAKAALFAIDKLFEEKYEARPIFISGTIVDKSGRNLSGQ
TGEAFVISVSNANPLCIGLNCALGATEMRPFIEAIGKCTTAYILCYPNAGLPNTFGGYDE
IPELTASHLKAFAMDGLVNIVGGCCGTTPAHIREIAKAVKHCKPRVPPSSVFQDYLLLSG
LEPFRIGPYTNFVNIGERCNVAGSRKFAKLIMTGNYEEALSIAKAQVEMGAQILDINMDE
GMLDGKSAMARFCKLIASEPDIARVPLCIDSSSFAVIEAGLKCCQGKCIVNSISLKEGEE
EFLERGRIIRRFGAAVVIMAFDEEGQATETEHKIQVCTRAYNLLVSKVGFNPQDIIFDPN
ILTIGTGMEEHNMYGINFMKATKLIKETLPGARVSGGLSNLSFSFRGMEVIREAMHGVFL
YHAIKVGVSLFLSHAIQVGVSLFLYHAIQVGGSLFLYHAIQVGGSLFLYHAIKGGMDMGI
VNAGNLPVYDDIDKELLELCENLIWNRDPEATDKLLLYAQNHTKGGKKVVQTDEWRFLPV
EERLEYALIKGIEKYVLEDTEEARSNHEKYTRPLHVIEGPLMNGMKVVGDLFGAGKMFLP
QVIKSARVMKKAVGYLIPFMEKEREEMMAASGSTEETDPYQGTVVLATVKGDVHDIGKNI
VAVVMGCNNFRVIDLGVMTPCDKILRAAVENKADFIGLSGLITPSLDEMIYVAKEMERLG
MKTPLLIGGATTSRTHTAVKIAPRYSCPVIHVLDASRSVVVCSQLLDENVKEEYFEEITE
EYEDIRQDHYDTLKDRRFLSLEQARAKGFHIDWLSHPKPVQPTFVGSRVFDDYDLRKLVD
YIDWKPFFDVWQLRGKYPNRGYPKIFKDKTVGEEAKNVFKDAQKLLNTLIDNKKIQAKGL
VGFWPAQSVGDDIHVYAEDVMPRSGEPVAKFYGLRQQVEKDSSSTDPYYCLSDFVAPLQS
GVPDYIGLFAVACFGAEELSKEFENHYDDYNSIMVKALADRMAEAFAEELHHRVRRELWG
YDCREQLDASDMHKIRYEGIRPAPGYPSQPDHTEKLSMWNLAGIAEKTGIQLTESLAMIP
AAAVSGLYFSSPKSTYFAVGKITKEQVQDYALRKRVATAEIEKWMGPILGYDDTE
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggctcccacaatacacgaaccttcacaggctgcaggtgacgttaaactgagcctagag
gatgagattagagagctgttgaagcagaggatcatggtgctggatggtggcatgggcaca
atgattcagcagcacacattggaggaagatgacttcaggggagaagaattcaagaaccac
ctgaaaagcctaaaggggaacaacgaccttctgagcataacgcagcctgacattatctac
aaaattcactgtgagtacttgcttgctggagccgatttcattgaaacaaatacgttcagt
agcacaagtgttgcacaggctgactacgggatggaacatttggcctatcgtctgaataag
gtttcagcagaactagcccggaaagcagctgataatgttactgcccagacaggtatcaag
agatacgttgcgggagctgtcggacctacgaacaagactttgtccgtatcgccttctgtg
gaaagaccagactacagaaacataacttttgaggaattggtagaaacatacacagagcag
accacaggcctcctggatggcggggtggacgtgttgttagtggaaaccatatttgatact
gccaatgccaaggctgctctctttgcaattgataagctctttgaagaaaagtatgaggca
cggcctatatttatttcgggaacgattgtggataagagtggacgaaacctttcgggacag
acgggagaggcctttgtcatcagtgtgtccaatgcaaatcctctttgtattggattaaac
tgtgccctcggagcgactgaaatgagaccattcattgaagcaattggaaaatgcacaacc
gcctatattttatgttatcctaatgcaggtcttcctaatacttttgggggctatgatgaa
attcctgaattgactgcaagtcatctgaaggcgtttgcaatggatggcttggtcaacatt
gttggtggctgctgtggaactactccagcacatatcagggaaattgcgaaagcggtcaag
cactgcaaacccagagttccaccgtcttccgtgtttcaagactacctgctactatcagga
ctggagcctttccgaattggtccatacaccaactttgtcaatatcggagagcgatgcaat
gttgcgggatcaagaaagtttgctaaactgattatgacaggtaattatgaggaagctctc
agcatagctaaagctcaggtagagatgggtgcccaaattctggatatcaacatggatgaa
ggcatgctagatggaaagagcgcgatggctcgattctgcaaactcattgcgtctgaacca
gatattgccagggtgcctttgtgcattgactcgtccagcttcgctgtgatcgaggcgggg
ctgaagtgctgccaggggaagtgcattgtgaacagcatcagcctgaaggagggggaggag
gagttcctggagagggggaggatcatcaggcgctttggggcagctgtcgtcatcatggct
tttgacgaagaggggcaggccactgagactgagcacaaaatccaggtgtgcacaagagcc
tacaatttactggttagcaaagtagggtttaacccccaggatatcatctttgacccgaac
atcctgacaattggaacaggaatggaggagcacaatatgtatggcatcaactttatgaaa
gctacaaaactgataaaggaaactctgccgggagccagagtgagtggaggtctttccaat
ctgtctttctccttccgaggaatggaagttatccgtgaagcaatgcacggggtgttcctg
taccacgccatcaaggtaggggtttcactgttcctgtcccacgccatccaggtaggggtt
tcactcttcttgtaccacgccatccaggtagggggttcactcttcctgtaccacgccatc
caggtagggggttcactcttcctgtaccacgccatcaagggtgggatggacatgggaata
gtaaacgcaggcaacctgccagtttatgacgacattgacaaggagcttttagagctgtgt
gagaacctgatctggaacagagatccagaagcaacagataagctgttactttatgcacag
aatcataccaaaggagggaagaaagtggtccaaactgatgaatggagatttcttcctgtg
gaagagagactggaatacgcactgattaagggcattgaaaagtacgtgctggaagatact
gaagaggcgaggtctaaccatgagaagtacacccggccactacatgtgatcgaaggtccc
ctgatgaatggcatgaaagtcgttggggacttgtttggtgctgggaaaatgttcctgcca
caagtgataaaatctgctcgtgtcatgaagaaagcggttgggtacctcatcccgttcatg
gagaaggagagggaggagatgatggctgcttcaggctccactgaagaaactgatccttat
caaggcacagtggtgctggccactgtaaagggagatgtccatgacatagggaaaaacatt
gttgcagtggtaatgggctgcaacaacttcagagtgattgatttaggggtcatgacaccc
tgtgataagatactaagggctgcagtggaaaacaaagcagatttcattggcctgtctggc
ctgatcacgccctctttagatgagatgatatatgtcgctaaggagatggaaagactggga
atgaaaacacctttgctgattggaggagcaaccacctccagaacccacactgctgtgaaa
attgctcccagatacagctgtcctgtcatccatgtgctggatgcatccaggagtgttgtg
gtgtgctcacagcttttggatgaaaatgtcaaagaggagtactttgaagaaataactgag
gaatacgaggatattagacaagaccattatgacactcttaaagacagacggtttttgtct
ttggaacaagccagagcaaaaggattccatatagattggctttcacaccccaaaccagtc
cagcctacttttgttggtagccgcgtgtttgacgactatgatctgcgcaagctggtggat
tacatagactggaagcctttctttgatgtgtggcagttgaggggcaagtacccaaacaga
ggatatccaaagatcttcaaggacaaaactgtaggtgaggaagcaaaaaatgtcttcaaa
gatgcacagaaactgctgaacacactgattgacaacaagaagatccaggctaagggacta
gttgggttctggccagcacagagtgttggggatgacattcacgtttatgcagaagacgtg
atgcctcgcagtggagagccagtggctaaattctatggcttgcggcaacaggtggaaaag
gactcttccagcacagacccttactactgcctctcagatttcgtggctcccctgcaaagt
ggagttccggattacattggcctctttgcagtcgcttgtttcggagccgaggagctgagc
aaagagtttgagaatcattatgatgactacaacagcatcatggtcaaggctctagctgac
agaatggcagaggcgtttgcagaagaacttcaccacagggttcgcagagagctctggggc
tatgattgcagggagcagcttgatgcgtctgacatgcacaaaattcgatacgagggcatc
aggccggcacccggctatccgagccagcctgaccacaccgagaagttgagcatgtggaac
ctggctggcattgcagagaaaacaggaatccagcttactgaatccctagctatgatacca
gctgctgcagtgtccggactgtacttctccagccccaaatccacatattttgcagttggt
aaaatcacaaaggaacaggttcaagactatgctttgagaaaacgggtagctacagctgaa
atagagaagtggatgggacctattctgggttatgacgacacagagtag
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integrated database retrieval system
