Polyodon spathula (Mississippi paddlefish): 121317153
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Entry
121317153 CDS
T07273
Name
(RefSeq) actin, alpha skeletal muscle 2
KO
K12314
actin, alpha cardiac muscle
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04814
Motor proteins
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121317153
04820 Cytoskeleton in muscle cells
121317153
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121317153
04261 Adrenergic signaling in cardiomyocytes
121317153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121317153
04147 Exosome [BR:
pspa04147
]
121317153
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
121317153
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121317153
Exosomal proteins of bladder cancer cells
121317153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
121317153
NCBI-ProteinID:
XP_041108733
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Position
6:36259573..36265642
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AA seq
377 aa
AA seq
DB search
MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNV
LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgatgaagagactaccgccttggtgtgcgacaacggttctggactagtgaaa
gctggcttcgccggtgatgacgctcccagagctgtcttcccatctattgtgggccgtcct
cgtcaccagggtgtgatggtgggtatgggtcagaaagactcatatgtaggagatgaagct
cagagcaaaaggggtatcttgaccctgaagtacccgattgaacatggcatcatcaccaat
tgggacgatatggaaaagatctggcatcacaccttctacaatgagctgcgtgtggccccc
gaggaacacccaaccctgctgactgaggcccccctgaaccccaaggctaaccgtgaaaag
atgacccagatcatgtttgaaaccttcaacgtgccagccatgtatgtggccatccaggct
gtcctgtccctgtatgcctctggtcgtaccactggtattgtgcttgactcaggtgacggt
gttacccacaacgtacccatctatgaaggttatgccctgcctcatgccatcatgcgtctt
gatctggctggacgcgatctgactgattacctcatgaagatcctgactgagcgtggctat
tccttcgtcacaaccgctgagcgtgaaattgtacgcgacatcaaggaaaagctgtgctat
gtggctttggactttgagaatgagatggcaacagctgcctcttcctcctccctggagaag
agctatgagcttcccgatggtcaggtcatcactatcggtaacgaacgtttccgctgcccc
gagaccctcttccagccatccttcattggtatggaatctgctggtattcatgagactgcc
tacaacagcatcatgaagtgcgacattgacatcaggaaggacctatacgccaacaatgtc
ctgtctggtggcaccaccatgtaccctggtattgctgaccgtatgcagaaagagattact
gctctggctcccagcacaatgaaaatcaagatcattgccccacccgagcgtaagtactct
gtctggatcggtggctccatcctggcttccctgtccaccttccagcagatgtggatcacc
aaacaggaatatgatgaagcaggtccctccatcgtccaccgcaaatgcttctaa
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