Polyodon spathula (Mississippi paddlefish): 121317217
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Entry
121317217 CDS
T07273
Name
(RefSeq) presenilin-2-like isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121317217
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121317217
Peptidases and inhibitors [BR:
pspa01002
]
Aspartic peptidases
Family A22: presenilin family
121317217
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GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
121317217
NCBI-ProteinID:
XP_041108842
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All DBs
Position
6:complement(43718681..43742919)
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AA seq
450 aa
AA seq
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MNTSDSEEEPCNERTSLMSAGSPPLSSYHIETGLPSSVDTQTKRRCPVTNQSNNRETHHE
GVSVEWDSTADNEDEELSLKYGAKHVIMLFVPVTLCMIVVIATIKSVSFYTEKGGQLIYT
PFTEDTTSVGQRLLNSILNTLVMISVIVVMTIFLVVLYKYRCYKFIHGWLILSSLMLLFW
FSFLYLGEVSKTYNVAMDYPTLALVIWNFGAVGMVCIHWKGPLQLQQAYLIMISALMALV
FIKYLPEWSAWVILGAISVYDLIAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMIWMV
GMTEQSAVQQPSDQERNSDEEVGQNHHDNTEDNRNMVMPETEVHGAQSRTLSAEEVEEER
GIKLGLGDFIFYSVLVGKASATASGDWNTTVACFVAILIGLCLTLLLLAIFKKALPALPI
SITFGLVFYFSTDNLVRPFMDNLATHQFYI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttcagacagtgaagaagagccttgcaatgaaaggacttcgctgatgtcagct
gggagtccccctttatcttcataccatattgagactggactaccaagctcggtggataca
caaaccaaaaggcgttgtccagtcacaaaccagagtaataacagggaaacacaccatgag
ggtgtatctgtagagtgggactccactgcagacaatgaggatgaggagctatccctcaaa
tacggggccaaacacgtcatcatgttgtttgtccccgtgactctctgcatgattgtggtc
atcgctactattaagtcagtcagcttctacactgagaagggtggacagttgatttatact
ccctttacagaagacacaacgtctgtgggacaacggcttctcaattcaattttaaataca
ctggtaatgatcagtgtcattgttgttatgaccatatttcttgttgtgctttacaagtat
cgctgttacaagtttatccatgggtggctgatcctctcctccttaatgctccttttctgg
ttcagctttttgtacctaggagaagtgtctaagacctacaatgtggcgatggattaccca
accctggctcttgtcatctggaatttcggggcagtggggatggtctgtattcactggaag
ggccccctgcagcttcagcaggcctatctcatcatgatcagtgctctgatggccttggtc
ttcatcaaatacttacctgagtggtctgcgtgggtcattctgggagccatctctgtttat
gatttgatagcggtgctctgtccgaagggccctctgagaatgctggttgaaacagctcag
gagagaaacgagccaatatttccagctttgatttactcctctgcaatgatctggatggtt
gggatgaccgaacaatcagctgttcaacagccttccgaccaggaaaggaactcagatgaa
gaagtaggccagaatcaccatgacaatacagaagacaacagaaacatggtgatgccagag
actgaggtgcatggagcacaaagcagaacattatcagcagaggaggtggaggaagaaaga
gggatcaagcttggactgggggactttatattctacagtgtcttagtggggaaagcttca
gccacagccagcggagactggaatacaacagtggcctgctttgtggctattctaataggc
ctgtgtcttaccctgctgttgctggctatcttcaagaaggcattgcctgccctgccgatc
tccatcacctttgggcttgtcttctatttctccacggacaaccttgtccggccatttatg
gacaaccttgccacgcaccagttttatatttaa
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