Polyodon spathula (Mississippi paddlefish): 121317370
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Entry
121317370 CDS
T07273
Name
(RefSeq) F-box/LRR-repeat protein 4-like
KO
K10270
F-box and leucine-rich repeat protein 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121317370
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121317370
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121317370
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121317370
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_At1g61320_AtMIF1
LRR_14
LRR_8
F-box_4
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
121317370
NCBI-ProteinID:
XP_041109161
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Position
6:complement(56631899..56663744)
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AA seq
618 aa
AA seq
DB search
MFPMLTVLSMFYYICLRRRARIGTRGEIMNSRRAIESNQRTLPLAVEVEQYVKEIVDFSS
HYGSENSMSYTMWNLAGMPNVYPSSGDFTQTAVFRMYGKWWEQCASAPQPFRRTPEKFQS
QDYVELAFEEPVYPTSIDILETYHPGAVIRILACSLNPFSQNLPAEIRWEVLWLGEPSKM
VTHQARQFSPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLRGVKERPLLSLYKMPVID
INDFSDSDEEKDAHEAERLRKQFGDTDINEHTNNGYFDKLPYELIQLLLDHLTIPDLCRL
AQTCKLLYQHCCDPLQYIQLSLQPYWARVNDAALDHLQSRCTLIQRLNLSWSGNRGAISV
PGFCRFLKVCGSQLVCLELACCHFLNEACLEVIAQMCPNLQELNLSSCDRLHPQAFSHIS
KLVGLRRLILYRTKIEQTALLSILTFCTDLRHLNLGSCVMIEDYDVIASMLSAKSKNLKS
LDIWRCKNITEKGISELVSGCRLLEELDLGWCSTLQSSTGCFVHLARHLPKLRKFFVTAN
RTVCDTDVEELAANCPNLQHLDLLGTRMVSPASLRKLLQSCKNLLLLDVSFCSQIDTRVV
QELTVQFPKVSIKKSFTQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctatgctaacagttctgagcatgttttactatatctgcctacggcgccgggcc
aggatagggacaagaggagagatcatgaacagtcgccgagccattgagtccaaccagcga
acactacctctcgctgtcgaagtggaacagtatgtcaaagaaattgtcgactttagttct
cactatggcagcgagaacagcatgtcttacaccatgtggaacttggctggcatgcccaat
gtctaccctagttctggcgatttcacacagacagcagtttttaggatgtacggtaaatgg
tgggagcagtgtgccagtgcgccccagccctttcgaagaacaccggaaaagtttcagagt
caggactatgtagagctggcttttgaggagcctgtttaccccacgtccattgatattctt
gaaacctaccaccctggggctgttattcggatccttgcctgctcactcaacccattctct
cagaatctaccagcagaaataagatgggaggtactgtggttgggagagccgtcaaaaatg
gtcacacatcaggctcgtcagttctcaccgtgcatcaagcaaataaacttccctaccaac
ctaatacgtttagaagtgaacagctcgctgctggagtattacactgagctggatgctgtt
gttctacgtggagtgaaggagaggcctttactgtccctgtacaagatgccagtgatagat
atcaacgattttagtgacagcgacgaagaaaaggatgctcatgaagcagaaagactacgt
aagcagtttggagacacagacattaatgaacacaccaataatggatactttgataaactt
ccctacgagttgattcagctgcttttagatcatctcactatcccagacctgtgcaggttg
gcacagacctgtaagctgctgtaccagcactgctgcgaccccctgcaatacatccagctg
agtttacagccatactgggcacgagtgaatgacgccgctctcgaccacttgcagtcacgc
tgcaccctgattcagagactcaatctgtcatggagtggaaacaggggagcaatctctgta
cccgggttctgcaggtttttgaaagtgtgcggttcccagttggtgtgccttgagttggca
tgctgtcatttcctgaacgaggcctgtctggaagttattgctcagatgtgcccgaacctt
caggaactgaacctctcatcctgtgatagactacatcctcaggctttcagccacatttcc
aaactggtgggcttgagacgtctcatactatatcgcacaaaaattgagcaaacggctctg
ctcagcattctgactttttgcactgaccttcggcaccttaaccttggcagctgtgtcatg
attgaggattatgatgtaattgcaagcatgctaagtgcaaagagcaaaaatctaaaatcc
ttggatatctggaggtgtaaaaacattacagagaaaggaatcagtgagctggtatcaggg
tgccggttgcttgaagagctggacctcggctggtgctccacactgcagagtagcactggc
tgcttcgtgcatctggctcgacaccttccaaagttgcgcaagttctttgtcactgcaaac
agaactgtgtgcgacacagatgtggaggagctggcagccaactgcccaaacctgcaacat
ctagaccttctgggaactagaatggtgagcccagcatcgttgagaaagctgcttcagtca
tgcaagaatctcctcctgcttgatgtgtccttctgttcccagattgatacccgggtggtg
caggagctgactgtccagttccccaaagtgtccatcaaaaaaagctttacccagtga
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