Polyodon spathula (Mississippi paddlefish): 121317922
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Entry
121317922 CDS
T07273
Name
(RefSeq) CD40 ligand-like
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04514
Cell adhesion molecules
pspa04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121317922
04514 Cell adhesion molecules
121317922
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121317922
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121317922
04090 CD molecules [BR:
pspa04090
]
121317922
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Tumor necrosis fators
121317922
CD molecules [BR:
pspa04090
]
Proteins
121317922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
Motif
Other DBs
NCBI-GeneID:
121317922
NCBI-ProteinID:
XP_041109953
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All DBs
Position
7:complement(55703576..55709958)
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AA seq
278 aa
AA seq
DB search
MINTYTTTLPPPPPAPSSRAPLPVMKSFIGFLGFLILAQMVGSAFLFMYIFKRMDEVQTL
MSYHEDMVVLKRIKQCEKPSDIRNTHLDCGKVVTDFQKLLPEIISRLRDTEKAEMAKGQL
PSDQNQDSQDQKLIAQLTVRSPSSLTSLSGNTIKLWSKDHMLLTTRSVIYEESTGSLRIK
RPGNYYIYSQTTFVKKPRASPFSQCIVQKDISGKETQLLRSYSTPGRDVTAKPDPELHTL
YQGAMFTLKEDDRVYVNVSDLSVLHWNGTATLFGLVLQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgataaacacctacaccaccactctgcctccaccgccgccagcacccagctccagagcg
ccactaccagtcatgaaatccttcattggcttcctgggcttcttgattttggctcagatg
gtgggatcagccttccttttcatgtatatatttaaaagaatggacgaggtccagactctg
atgagctaccatgaagatatggtggtactgaaaagaataaagcaatgtgaaaaaccaagc
gacatcagaaatacacacctggactgtgggaaggtcgtcacggattttcagaagctactt
ccagagattatttcaagactgagggatactgagaaagctgaaatggcgaaaggtcaactc
ccttcagatcagaatcaggacagccaagaccaaaaattaattgctcagctgaccgttcga
tctccctcctcgttaaccagcctatcaggcaacaccattaaactctggtctaaagaccac
atgctgttgacgaccagatccgtgatctatgaggaaagcactggctccttgcggatcaag
agacctggaaattactatatctattctcaaaccaccttcgtaaaaaagccgcgagccagt
cctttcagccaatgcattgtgcaaaaagatatttccggaaaggagacccaactgttgagg
tcctatagcaccccgggtcgcgatgtaactgccaaaccagaccctgagctgcacacgttg
tatcagggagcgatgttcacactgaaggaggatgaccgagtgtacgtgaatgtgtctgat
ttatcagtcttgcattggaatggcacggcaacactgtttggattagttctgcaatag
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