Polyodon spathula (Mississippi paddlefish): 121317940
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Entry
121317940 CDS
T07273
Symbol
ifng1
Name
(RefSeq) interferon gamma 1
KO
K04687
interferon gamma
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03050
Proteasome
pspa04060
Cytokine-cytokine receptor interaction
pspa04217
Necroptosis
pspa04350
TGF-beta signaling pathway
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121317940 (ifng1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121317940 (ifng1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121317940 (ifng1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121317940 (ifng1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121317940 (ifng1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pspa03051
]
121317940 (ifng1)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121317940 (ifng1)
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121317940 (ifng1)
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121317940 (ifng1)
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Interferons
121317940 (ifng1)
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Cytokines
121317940 (ifng1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFN-gamma
Z1
Motif
Other DBs
NCBI-GeneID:
121317940
NCBI-ProteinID:
XP_041109961
UniProt:
A0AAU7YDW3
LinkDB
All DBs
Position
7:1776875..1779138
Genome browser
AA seq
172 aa
AA seq
DB search
MNSLQSLLLINAIGLVTFGCVYSSEVISDYVKKGILQLEEHYKTNDPALAGGGPLFLNVL
KYVDKQEGGDKILLSEIVNVYIDILKNMKDTTEDQLSKNSIQHIYSEMERLRAKFESGMS
TLKELKKLWEIKKNDPIVQRKAMLELKQVLEKAMRIKIKNVQKRRRRRVNSP
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaattcactacagagtttgttacttataaatgcaattggtctagttacctttggatgt
gtctattccagtgaggtgatctctgactatgtgaaaaaaggcatcttacaactggaagaa
cattataaaacaaatgatcccgccttggctggtggaggtccattgttcctcaatgttctc
aaatatgttgataaacaggaaggcggagacaagatacttcttagcgaaatagtgaacgtg
tacattgatatcctcaagaacatgaaagacaccactgaagatcagctttcaaaaaacagc
atccaacatatctacagtgaaatggagagactgagagcaaagtttgaaagtgggatgagc
accctgaaagagttaaagaaactatgggaaattaagaaaaatgatccgattgttcagcgt
aaagctatgcttgaactgaaacaagtgctagaaaaagccatgagaatcaaaatcaaaaat
gtgcagaagagaaggagaagacgagtaaactcaccataa
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integrated database retrieval system
