Polyodon spathula (Mississippi paddlefish): 121318494
Help
Entry
121318494 CDS
T07273
Symbol
cep290
Name
(RefSeq) LOW QUALITY PROTEIN: centrosomal protein of 290 kDa
KO
K16533
centrosomal protein CEP290
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121318494 (cep290)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121318494 (cep290)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121318494 (cep290)
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
121318494 (cep290)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
Fez1
Cnn_1N
F-box-like_2
Motif
Other DBs
NCBI-GeneID:
121318494
NCBI-ProteinID:
XP_041111154
LinkDB
All DBs
Position
7:28739656..28790462
Genome browser
AA seq
2477 aa
AA seq
DB search
MPPNLDWGQLMKVDPDALSGQERLADKLLLSLSEVESNDLKESDQDKLIQLFRITQALMK
MKAQEVDMAVEEVEKAGEEQATIENQLKAKVIKLENELEMAQMSVGGRDTRFLRDEIRQL
ENQLERKEKELAEMEKQINKEKKASENLTLRAEEAENENGKLRRENDLLRQDIIDYQRQI
DSQRETLLSRRGGDSDFRSQLSKKNLELVQYLDEIQNLTEANEKLEVQNHEMQKNLEESV
NEMEKMTDEYNKMKVVVQQTDIFMDQLSKEKEHLRLQVQELTEHIQARTEEDDPVMAAVN
AKVEEWKSVLSAKDDEIIEYQQMLRDLKVKLKTTQLDSDKNNVMALQQAVQERDSQIKML
TDQVEQYTSEMERNALVIEDLKKQLQKDTGLPSLTQQNRIGEIQTKLQVAEKRALEAERV
ADLAESDARDKDKELSEALARMRAYEAGEYGLENAVAEIKECKTQIKIRDHEIEALTKEI
NKLEMKINDLLDENEDFRERLGLNPKEIVDLTEFRRTKALKQQQYCAENQILLKEIERLE
EERLELKKHIRRLAKDKGKRAAALGLTADDLQLVDDFTENLKSSEKPNLTPYTDSLEQIK
HRNEHLLKELYGKEKELELKKTELAQLKSKSKNTMEENKQLEQGMKEILQAIKDTQKDSK
GETGLNIPILERLVNAIETKSSEGVFDANVHLKAQVDQLTGRNDELRKEMKEARKEAASA
ANQLEKANEKVARMENEIQMLHQSGGSGVVFKILNLPDKMAPSSAEVINSLNEYTVELLQ
ELHNKEESMMKLEEALEEYKRKFAVIRHQQGLLYKEYQSERELWQKDTEKIQELQDKLGE
QKEQDAAKIQEYNHWLDVLQKDPDEIKKQLAEAARKMTVLRVNEKSLTRHYTTLMEMEQH
LRKENNKLKNEMIAMEAAVAERVGYLQRYKDMGAFKIAALQKALNDSVPSADLERANKQY
NDLTTKYRDMLQKDNLLVQKTTNLEYLEGESTVLRGQIDALNKELEITKEKLHTLEQAWE
QITKLGGESAMDKATKAITNGEIVSISKKITTLEMKELNERQRAEHAHKMYEHLRSSFRQ
VEERNFELETKFAELTKQNLEAQRIEQELRDELANSVSKAVSDADRRRIMELEKTEADLK
IEVSKLRDVSDIAKMQTSALEARQQSREKEVEALRKLVLDYQAQSDEKALIAKFHQHIIA
LQVSEATAVSKLEATVTKLQKLEAYNLRLEQKMDDKEQSLYYARQEGRNRAKHLRQTVQS
LRRQFSGALPLSQQEKFSKTMIQLQNDKLKVLQEVKQAEQESRKAEDKALELEVRLKGLE
ELISTLKDVRGAQKVNEWHKKMEELRLQDLKRNRELGILKEEIKYLKNVIAEQERTISSL
QEEVVQQNNLYEEQQLSWDQREVDLERQLDLYERQHNDVLSTARKFEEAAGSIPDPSLPV
PQQLDLALRKIREHVRTILETQTTCKTLDEKLKEKEAALWKAEQNVLSRDRVINELRLRL
PATAEREKLIAELGSREEDPEFQQALKVAHQTIANLQARLNQKEDVLKKYQRLQAKARQD
QEEVAKKHDEELRLLHQKLELHSDTSLNKFKQTALELMKKPSIAVPTTKHLVRLAEMEQT
VAEQDNSLSNLTDKLKRVTAELEKQKQITVLKIKEHSSEKAKLEERHVAEVKKLKENVAE
LRTHLTQMEKEVHYLRTELEAQKEANTRAPTTTMKSLVERLKAQLALKEKQQKALSKALL
ELRSEMTAHAEYQIVASASQKEENLNVQQIVDKHTKELKFRIEDLNEQLLTAKENLRASK
NKENSLKEEMDSLNRDLNRSCKAQNKLQSEKEALDKENEELKKRIKRLASSMQIKSDSES
KQSTVDELQKKIKRLETELERKATSQHVERKIIKEDKKSKEEIARWEEGKKWQARTEGMR
NKLKEKEKEVESLTKQLSTLKDLYTRLEQEKALCRRKSLQKKIKARGVTVDQVVGVRTLE
SEKEIEELKRRNSELENHIVTIKKQQALPRDSAMEDLNLKNRYLEEKLHALERQLSKDTH
SRPSTSGIGSDSHSQKDDEIHRENLKLSSENMELRFQLEQASKDLPRFKDKVADLKEMCD
LLKKEKTEIEKKLGNVRGSGRSGKTVPELEKTIGLMKKVVERVQRENEELKKAPGVVSKE
KLTGLERENEKLKSEFEKLKLQMGGQLSMRYESKTKGMEKILAENERLRKELKKEADSAE
KLKIAKNNLEIMNEKLMVQLEETSKRLSFAESRGPQLEGVESKSWKSIVVTRMYESKMKE
LETDIDKKNKSLSDLKQLLREATEREQKTEHYISDLKEQIELLKHFPEEAKTEPGLIREL
QLIRLTNDRLEKEKTELIHQLKVYRQQIGATTEGAAEPGYDELLEKCIKHDKMMKDLVDL
QTEIKASDLEKRYLQEEVKKMKKELENFDPTFFEEIEDLKYNYNQEVKRNILLEEQLKKL
SDQFGVQVNIPANVSID
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaatcttgattggggtcagctaatgaaagttgatccagatgccttgtctggt
caggaaaggcttgcagataagcttcttctctccctttctgaggttgagagcaatgacctg
aaagaaagtgaccaagacaagctcattcagcttttcagaatcacccaagctttaatgaag
atgaaagcccaggaagtggatatggctgtagaagaagtagaaaaagctggtgaagaacaa
gcaacaatagaaaaccagctgaaagctaaagtgatcaaactggaaaatgagttggagatg
gctcagatgtctgtgggtgggagagacactcgttttcttcgggatgagattcggcagctg
gaaaatcaattggagcgcaaagaaaaggagctggctgaaatggagaagcaaattaacaag
gaaaagaaagccagtgaaaatctgacacttcgagctgaagaagcagaaaatgaaaacggc
aagctaagaagagagaatgacctgcttcgacaggacatcattgattatcagaggcagata
gactcccaaagagagactcttctttccaggagaggaggtgattcggatttccgatcccag
ctctctaagaagaacttagagcttgttcagtatctagatgaaattcagaatttgacggaa
gcaaatgagaaactggaagttcagaaccatgagatgcagaagaacctggaggaatctgtt
aatgaaatggaaaagatgactgatgaatataacaaaatgaaggtggttgtgcaacagact
gatattttcatggaccagctaagcaaagaaaaagagcaccttagacttcaagtgcaagag
ctgacagaacacattcaggcaagaacagaagaggatgatccagtaatggcagcagtaaac
gcaaaagtggaggagtggaagagtgtgttatctgcaaaggatgatgaaattatcgaatac
cagcagatgttgagggacctcaaagtaaagctcaaaaccacccagcttgactctgacaaa
aataatgtcatggccctccagcaggctgtacaagaacgggacagtcagatcaagatgctg
actgatcaagtagaacaatacacaagtgagatggaaagaaatgcacttgttattgaagac
ctaaaaaaacagcttcagaaagatacaggtcttccatcgttaacacagcagaacagaatt
ggagagatccagacaaagctacaggtggcagagaagagggcactggaggctgagagggta
gcggatctggcagagtctgatgccagagacaaggacaaagaactaagtgaagctctggct
cgaatgagagcatatgaggctggtgaatatggtctggaaaatgctgttgcagaaattaag
gaatgcaaaacccagataaagataagagatcacgaaattgaggctctgacaaaagaaatt
aataaacttgaaatgaagatcaatgacctgttggacgaaaatgaagattttagagaacgt
ttgggtcttaatcctaaagagattgttgatttgactgaatttcgaagaacaaaggctctg
aaacagcaacagtactgtgcagaaaaccagatcctccttaaggagattgagaggctggaa
gaagaacggcttgagctgaagaaacatatcagaagacttgcgaaagacaaagggaagaga
gctgctgcattaggacttacagcagatgatttgcagcttgttgacgatttcacagaaaat
ctgaaaagctctgaaaaaccaaacctaactccttatactgacagtcttgagcagatcaaa
cacaggaatgaacatcttttaaaagaactgtacggtaaagaaaaagaattggaacttaaa
aagacagaattagctcaattaaaatccaagtcaaaaaacacaatggaagaaaataaacag
cttgagcagggaatgaaagaaatattacaagcaataaaagatacacaaaaggattcaaaa
ggagaaactggccttaatatccccattctggaaaggcttgtcaatgcaattgagacaaag
agctcagagggagtatttgatgccaatgtgcatttaaaggctcaagttgatcaactcact
gggcgaaatgatgaactgaggaaggaaatgaaagaagctcgcaaagaggctgcaagtgct
gccaaccagctggagaaagccaatgaaaaggttgctcgcatggaaaatgaaatacaaatg
ctacatcagtcaggtgggagcggtgttgtgtttaagattcttaatcttccagataagatg
gccccttctagtgctgaagtaatcaattctcttaatgagtatacagttgaacttctacag
gaattacataataaagaggaatctatgatgaagctggaagaagctttagaagaatacaag
cggaaatttgctgtgattcgtcatcaacaaggactgctatataaggagtaccaaagtgaa
agagaattatggcaaaaggatactgaaaagattcaggaactccaagataaacttggagag
cagaaggagcaggatgctgctaaaatacaagagtataatcattggttagatgtgctacag
aaagaccctgatgaaataaagaaacaactggctgaagctgctcgaaaaatgactgtccta
cgggtaaatgagaagtccctgacaaggcattatacaaccctaatggaaatggagcagcat
ctcagaaaggagaacaacaaattaaagaatgaaatgattgcaatggaggcagcagtggca
gaaagagttggatacctacaaagatataaggacatgggagcttttaaaatagctgcattg
caaaaagccttgaatgacagtgttccctctgctgatctggagagagcaaataaacagtat
aatgacctgacaaccaaatacagagacatgctgcaaaaggacaacttgcttgttcagaaa
acgaccaacctggaatatttagagggtgaaagtacagttctccgcggacaaattgatgcc
ttgaacaaagaacttgagataaccaaggaaaagctgcacacattagagcaagcctgggaa
cagatcaccaaattaggaggtgaaagtgcaatggataaagcaaccaaggcaatcaccaat
ggtgaaattgtgtccatctccaagaaaattacgacgctggaaatgaaagaattgaatgaa
cgacagagagcagaacatgcacataaaatgtacgaacacctgagaagctcgttcagacaa
gtagaggagcgtaactttgagctggaaaccaaatttgcagaactaactaaacaaaatcta
gaagctcaaaggatagaacaggagctaagggatgaattggctaacagcgttagtaaagca
gttagtgatgctgacaggagaaggattatggagttggagaaaactgaggctgacctgaag
attgaagtatcaaagttaagagatgtctcagatatagccaagatgcagacttctgctttg
gaagctcgccaacagtccagagaaaaggaagtagaagcccttagaaagctagtgttggat
tatcaggctcaatcagatgagaaagccctcatagcgaagttccaccaacacattatagca
ttacaggtgagtgaagcaaccgctgttagcaaacttgaggccacagtgaccaaactgcag
aagctggaggcctacaacctgcgcctggagcagaaaatggacgataaggagcagtcgttg
tactatgccagacaggaggggcggaacagagccaaacacctgaggcagactgtgcagtcc
ctcaggaggcagttcagtggcgccctgccactgtcccagcaagaaaagttctccaagacc
atgatccagctgcagaatgacaagctgaaggtgcttcaggaggtgaagcaggctgaacag
gagagtagaaaggctgaagacaaggctctggaactggaagtccgtctcaaggggctggag
gagctgataagcacactgaaggatgtcagaggagctcaaaaggtgaacgagtggcacaag
aaaatggaagagttgcgtcttcaggatctgaaacggaaccgagagctgggcattctgaaa
gaagaaattaaatatttaaagaatgtcattgctgagcaagaacgcaccatcagcagtctg
caagaagaagttgttcagcaaaacaatctttatgaggaacagcagctatcttgggatcag
agggaagtggatctggaacgacagctggacctgtatgagcgtcagcataatgacgtgctc
agcactgcacggaagtttgaggaagctgcaggatctattccagaccccagcttgcctgtt
ccacagcagcttgacttagctttaagaaagatcagagagcatgtccgcaccattctggaa
acacagacaacgtgcaagaccttggatgaaaaactgaaagaaaaggaggcagccctttgg
aaagcagaacaaaatgtgttatcgagggaccgtgtaatcaacgagctgagacttcgcctt
ccagcaacagcagagagggagaaactcatagcagagctgggtagcagggaagaggaccct
gagtttcagcaggctttgaaagtggcccatcaaaccatagcaaacttgcaggcccggtta
aaccagaaggaagatgtcctgaagaaataccagcgcctccaagccaaagcaagacaggac
caagaagaggttgcaaagaagcatgacgaggaactccgattattacaccagaagctggag
ttgcactctgatacatcactaaacaagttcaagcaaactgccctggaactgatgaagaaa
ccttccattgctgttcctactacaaaacacctggtcaggctagctgagatggagcaaaca
gtagctgagcaggacaactcgctgtctaatcttactgataaactaaagagagtaacagca
gaactagagaagcagaaacaaatcacagtgttaaaaattaaagaacactcaagtgaaaaa
gcaaaacttgaggagaggcatgtagctgaggtaaagaaactgaaggagaatgtggctgag
cttcgaacccacttgacccaaatggaaaaggaggtgcattacctcagaactgaactggag
gcacagaaagaggccaacaccagggcccccaccactacaatgaaaagcttggtggaaagg
cttaaagctcaacttgctttaaaggaaaaacagcaaaaggctctcagtaaggctctgtta
gagctgagatcagaaatgactgctcatgcggaataccagattgtggcaagtgcatcacaa
aaagaggaaaacctgaatgtccagcagattgttgataagcatacgaaagaactgaagttt
cgcattgaagacttgaatgagcaacttctgacggcaaaggaaaatctgagagcaagtaaa
aacaaggaaaacagtctaaaagaagagatggacagtttaaaccgggatctaaacaggagt
tgtaaggctcagaacaagttgcagtcagagaaagaagcactggacaaagagaatgaagag
ctcaaaaaaagaataaagaggctagccagcagcatgcagatcaagtcagatagtgaaagc
aagcagtccacagtagatgaacttcagaagaagataaaaaggttagaaactgagctggaa
aggaaggctacatcacaacatgtggaaagaaaaataataaaggaagacaagaaatcaaaa
gaagaaatagcaaggtgggaagaaggtaaaaaatggcaagctagaactgaaggcatgcgc
aacaaactgaaagaaaaagagaaggaggttgagagcttaacaaagcaactgagtacttta
aaagacctctacacacggcttgagcaggaaaaagcactttgcagaagaaaatctttgcag
aagaaaatcaaggcccgtggtgtgactgtggatcaagtggtgggagttcgaactctagag
tctgaaaaggagattgaggaactgaagaggaggaattcagagctggaaaatcacattgtt
actataaagaaacagcaagctttaccacgagattctgcaatggaagatttgaatttaaaa
aatcgataccttgaggaaaaactccatgctttagaaagacaactttcaaaagatactcat
tccagaccttcaacatctggtattggatctgattcacattcccaaaaagatgatgaaatc
catagggagaatctcaagctgtcttcagaaaacatggaactgcgtttccaactggaacag
gccagcaaagacttgccaagatttaaggacaaagttgcagacctaaaagagatgtgtgac
cttcttaaaaaggagaaaacagaaattgagaaaaaacttggaaatgtacgagggtctggc
cgcagtggcaagacagtccccgaactggagaaaactataggccttatgaagaaggtggtg
gagagggtgcagagggagaatgaagaactgaagaaagctcctggagtggtatccaaggag
aagcttactggcctggaaagggagaatgaaaagctcaagtcagagtttgaaaaactgaaa
cttcaaatgggaggtcagctaagcatgaggtacgagtctaaaacaaagggaatggagaag
attctcgcagagaatgagaggctacgcaaggagcttaaaaaggaggcagactcggcagaa
aagctgaagatagcaaagaataatctggagatcatgaatgaaaagctaatggtgcagttg
gaagaaaccagcaagaggttaagttttgctgaaagcagggggccacagttagaaggtgtg
gaaagcaaaagttggaaatctattgtggtcacaagaatgtatgaaagtaaaatgaaggaa
ctagagactgacattgacaaaaagaacaagagtctttcagacctgaaacagctgctacga
gaagcaactgagcgggaacagaaaacagagcactatatcagtgacttgaaagagcaaatt
gaacttctaaaacatttccctgaggaagcaaagactgagccaggcctaatcagagagcta
cagctcatcaggctaacaaatgatcgtctggagaaggaaaaaacagagcttattcaccag
ttaaaagtttatagacagcagattggggcaacaacagagggtgctgctgaacctgggtat
gatgagcttctagagaaatgcataaaacatgacaaaatgatgaaggacttggtggatctg
caaaccgagatcaaggcctcagacctagaaaaaagatacttgcaggaagaagtaaaaaag
atgaaaaaagaacttgagaactttgaccccactttctttgaagagattgaagacttgaag
tacaattacaaccaagaagtgaagaggaatattctcctggaggagcagcttaagaagctt
tcagaccagtttggagttcaggttaacattccagctaatgtatccattgactaa
DBGET
integrated database retrieval system
