Polyodon spathula (Mississippi paddlefish): 121318560
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Entry
121318560 CDS
T07273
Name
(RefSeq) von Willebrand factor-like
KO
K03900
von Willebrand factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
pspa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121318560
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121318560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121318560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121318560
Chaperones and folding catalysts [BR:
pspa03110
]
Intramolecular chaperones
Others
121318560
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121318560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
VWA
C8
TIL
VWA_2
VWC
VWF
VWC2L_C
Pacifastin_I
PqqA
Motif
Other DBs
NCBI-GeneID:
121318560
NCBI-ProteinID:
XP_041111290
LinkDB
All DBs
Position
7:33451870..33517234
Genome browser
AA seq
2843 aa
AA seq
DB search
MEFYMERVLVWALVLQIIDWPSSALVSGKGNDALTGRCSLFGKDHIQTFDGNFYDFRGDC
SYKLAGDCQKRSFSLLGDFQKGQRKSVSVYLGEFFEIHLFLDGTVTQGEKRLSLPYASSG
IFIEMEAGYYKVSSEEYGFQMKIDNNGNIHTLLSTKHSNRTCGLCGNFNDVPEDDYMAQE
GFLTENSYDFANSWALHGDGAPCKRVLPPSQTCNVSTETQEDPMSRCQILSSSSVFLKCA
HIVDPEPFVSMCEDDTCHCHEGPECQCHAFLEYARTCAQRGVILKGWPAESHCRPQCPFG
MEYNECISPCSHTCQSLHINEVCKEGCSDGCSCPAGKVLDGERCVDSSQCSCIHTGRRYP
PGSSIAQDCNTCICRHGLWECSNEECPGECFVTGQSHFKSFDNKFFTFSGVCQYLFAKDC
QDNEFAVVIETVQCADDQDAVCTRSATLRFHKLSNVTIKMKHGGAVSVNGLDIQTPLIQG
PLRIQQTVMSSVRLTYNEDFQLDWDGRGKLLLKLSPAYSGKMCGLCGNYNGNQGDDFLTP
AGLAEAQVGGFGNSWKINGECEDVTKQDLDPCSLNPKRVRYAEACSVLMSPDFEPCHYEV
NPAPFVKNCRYDVCSCSDGKECLCSAVSSYATACARKGVLINWRTPDFCEMSCAEDHVYQ
QCGSPCNQTCRSLSFPDTACRELCMEGCYCPPGLYADDHGECVPRAQCACHYDGDVFQPG
DVFSSHFTICSCEDGAMHCSSSDLPSAMLSDLLMNNLPSTRVRRSLSCRPPMMKSVCRSP
REEGIECTKTCQNYDLECVSQGCISGCMCPPGWVRHRMRCVVPEQCPCFHNGREFRPGQT
VSMDCNTCVCRDRKWECTNQVCDGSCKSIGEANYLTFDGVMYTFPGLCQYVLVQDYCNSN
EGTFRILVENSGCGVQGQRCSKVTMVLYEGGVIELANGVVTMKKPVKDETEVEIIRSGLY
FILLLGKGISVTWDLGTRVTVQLKGQYRNKVCGLCGNFDGVQNNDLQSSNNQVEVEPLDF
GNSWKVNPGCAGAIQLPSQCSDNTMKLVSVEQSCNVLVSELFKECNKLVDPEPYWDICTY
DTCSCPSVGDCVCFCDAVAAYAQECAQHGVLIHWRSNSLCPLSCDELNAAELEFACEWRY
NVCAPACPITCQHPEPLECPLQCVEGCHANCPPGKILDEVAMKCIDPSQCRVCLHEGRRI
AHGKKIILNRENENLCQICHCEGNNLSCEFCPLELVTTLAPTTFPVTTSYRDLVTTPVPE
NVCRRMMDLAFMVDGSSSLTEDDFETVKDFIINVAERFHMGAAYTRMTVMQFHTGIKSYE
MQVQKPVFKKVVREMKYSGGEAAFINEALKYLALNIFDKDKREDASRVAVLLTASTSPRK
IKGMLKLLSKKSITMISIGLGPYISMDQINQITSNSPSNKAVILSSVNELQENAEELTKY
LCHLGQIPTVPLPKVTKSPKAPPTTTTTASSIISKTLVPLNAASSTTSSSTGPTTSASQA
QIDVTFVVEGSDKVGEENFNITKEFLLKSIQKMSVGEKTFHITIIQYSYTITIEYSFTES
QRKDDILEGIRRMEWRGGNATNTGAAVSETTLTTAQGSRDQVPDLVFLISSNPPSDTITK
SAEHSQTKIIPIGVGPQVREVDLELIGHPQKPIIIKDYKDLLELGVTTVIETIRAIASPS
LPATPTTAALHSTPVPTTMLPTSVPCDRPMDVIIMLEGSAGIPQPQFEEMKTFVKAFINK
ADIGANGTHLAVLQYGRSNSLEVSWVDRQNKESLLTSVNLMQQREAAPTRLGDALRFTVQ
SAVSEVHGGRPGVPKIAVLIVTRPSQDPVEEAAREALTAGVAVFPIGAGTQFDENQLVTM
AGHAMKDNIIHLHRVEDLPTMVTLGNQFIDKLCRVGPPGVCVDDEGNERKPGETWTLSDQ
CHSLLCHPNGAVTIQNHKVNCEKMQKPACKNNLPSVKIQETCGCRWACPCMCMGSSTSHI
VTFDGLAFKLTGSCSYTLLRDAAHGSDIILHNAPCPADPKQSCMKSIEVKHAGTSIALRD
DMKVTVDGMETAAPFSSRGVEVTLYGALMHEVKIPSLGYVLTFTPGNNEFTVQLTPTLRT
AKTSGLCGFCDQNDINDFALKDGSVTLESHVFIKEWTIQDSSGPSCEPVASLTCTHQASD
QCLVLRSSMFQRCHAAVPPAPYIALCQETSCHGQDLCQVVAAYSHLCRLQGVCINWRSAG
FCAQQCPSSMVFDSCKTGCIQQCASPFNSTLCMDTPTEGCFCPPGKVLDNGECVKEEACS
QCLDENRVAHKHLESWIPEHDPCQICMCLDNRNINCTARPCSSTRAPVCGACEVLTKKKD
SDQCCQEYECVCDLVSCDLPPLPTCADGMSVVLTNPGECKPVYECACKKEVCKLEPRPSC
PPHRKFSTRETQCCDRYECTCNCVNSTVTCPPGYLSTSVTNDCGCTAISCLPDSVCVHHE
VVYQVGSVWEEACKTCSCTDKQDKVTALHIVECTEKVCNEICPVGTSYTTKDGECCGKCK
ISACQEHSVGGPLADMDSGGRLRHVGERWRSAQNPCVISECVQVNDEVFINQQNLSCSQL
DTPHCPPGTALQCDTFTDCCPSCHCAPMDGCVMNNTVIGSGETFLVDECTRCQCSVETGV
IKRYRLLCGKVTCAPCQEGYRLEKVNGSCCGKCVATTCSFSLKDGTAIRLQAGEIREDGC
TTSLCKVNERGDFVLETKVTSCPPFDKDKCAADGGKVVQLGKTCCETCAEPECKQTVGIL
KYIKIDDCMSENQVDIHYCEGKCSSKSIYSLEHHHVESHCVCCSATDTEPMVVPLRCANG
TVLQHEVLNVKQCDCLSHACAGE
NT seq
8532 nt
NT seq
+upstream
nt +downstream
nt
atggaattctacatggagagggtactggtgtgggctttggtcttgcagataatagactgg
cccagctcagccctggtttctgggaagggtaacgacgcccttacaggccggtgcagtctc
ttcggaaaggaccacatccagactttcgacgggaatttctacgacttccgtggagactgc
agctacaagctggcaggggactgtcagaaacgctccttctcgctgctgggtgacttccaa
aaggggcaaagaaaaagcgtgtctgtctatctgggagagttctttgaaatccacctgttt
ttggacggtactgtcactcagggggagaaaaggctgtcacttccctatgcctccagtggt
atcttcatagagatggaggcaggatactacaaggtgtccagcgaggagtatggcttccag
atgaagattgacaacaacgggaatattcacacgctgctctccacaaaacattccaacagg
acgtgtggcctctgtgggaacttcaacgatgtccctgaggatgactacatggctcaggag
ggctttttaacagagaacagctacgactttgctaattcctgggcccttcatggtgatgga
gcaccctgcaaaagggtgctgcccccaagccaaacctgcaatgtttctactgagacacaa
gaggatcctatgtcaaggtgtcagatcctctccagctcttctgtatttctgaagtgcgct
cacattgtggaccccgagccctttgtcagcatgtgcgaggacgacacctgccactgccac
gagggtccagagtgccagtgccacgccttcctggagtacgctagaacttgcgcccagaga
ggcgtgatcctgaagggctggcccgcagagagccactgccgtccgcagtgtccctttggt
atggaatacaatgagtgcatcagtccctgcagccacacttgccagagtctccacatcaat
gaagtgtgcaaggagggctgtagcgatggctgcagctgcccagcggggaaggttctggat
ggagagcgctgtgtcgactcctctcagtgctcctgcatccacacgggccgccgctacccc
cccggctccagcatcgcccaggactgcaacacctgcatatgcagacatggactgtgggag
tgcagcaatgaagagtgccctggagaatgcttcgtcactgggcagtcccacttcaagagc
ttcgataacaagttcttcactttcagtggtgtctgtcagtacctgtttgcgaaggactgc
caggacaatgaatttgctgtcgtcattgaaacagtccagtgtgccgatgaccaggacgca
gtgtgtaccaggtcagccactttgcgtttccacaagctgtccaatgtcaccattaagatg
aagcacgggggagcggtgtcggtaaatggcctggatattcagactcctttaatacaagga
ccccttcggatccagcaaaccgtcatgtcatctgtgcggctgacttacaatgaggacttt
cagctggactgggacggccgtggcaaactgctgctgaagctaagcccagcgtactctggt
aaaatgtgcggcctgtgtggaaactacaacggtaaccagggcgatgacttcctgaccccg
gctggcctggccgaggcgcaagttgggggcttcggcaactcctggaagataaacggggag
tgcgaggatgtgaccaaacaggatttggacccctgcagcctgaaccctaagcgagtgcgg
tacgcagaggcctgctctgtgctcatgtccccggattttgaaccctgccactacgaggtg
aaccccgctccattcgtgaagaactgccgctacgacgtctgctcctgctcggacgggaag
gagtgcctgtgctctgctgtctccagctacgctaccgcctgtgccaggaagggggtcttg
attaactggagaacgcctgatttctgcgagatgagctgtgctgaggaccatgtgtaccag
cagtgtgggagcccctgcaaccagacctgccgctcgctgtctttccctgacacagcctgc
agggagctgtgtatggagggttgctactgccccccggggctctacgctgacgaccatggg
gagtgtgtgcccagggcccagtgtgcttgccattatgacggagatgttttccagcccggt
gatgtcttctccagccacttcaccatatgttcctgtgaagacggtgcgatgcactgcagc
tccagtgacctccccagtgccatgctgtctgacctcctcatgaacaacttgccgtccaca
cgagtgagaagatcgctgtcctgcagaccccctatgatgaagtctgtgtgcaggagccct
agagaagaggggattgagtgcaccaaaacctgccagaactacgatctggagtgtgtgagc
cagggctgcatctcaggctgcatgtgccctcctggatgggtccgacaccggatgcgctgt
gtggtcccggagcagtgtccctgcttccacaatggtagggaattccgtcccggacagaca
gtatccatggactgcaacacctgcgtgtgtcgtgacagaaagtgggagtgtacaaaccag
gtctgtgacgggtcctgcaagtccattggagaggcgaactacctgacctttgatggagtg
atgtacacgttcccaggactctgccagtacgtgctggtgcaggattactgcaatagcaac
gagggcacattccgcatactggtggagaacagtggctgtggcgtgcagggccagaggtgt
tctaaagtcaccatggtgctttatgagggaggagtcatagagctggccaatggagtggtg
acgatgaagaagcctgtaaaggacgagacggaggtggagattatccgatcagggctgtac
ttcatcctgctgctggggaaagggatctccgtgacgtgggatctggggacaagagtcacg
gtgcagctcaaaggacagtaccggaacaaagtgtgtgggctgtgcgggaacttcgatgga
gttcaaaacaacgatttgcagagcagcaacaaccaggtggaggtggagcctttggacttt
ggtaattcttggaaagttaatcccggctgtgcgggcgctatacagctgccttcccagtgc
agtgacaacaccatgaagctggtttcagtggagcagtcctgcaatgttctggtcagcgaa
ctcttcaaggaatgcaacaagctggtggacccagaaccctactgggacatctgcacctat
gacacctgctcctgcccgtccgtcggagactgtgtgtgtttctgtgatgccgtggcagct
tacgcacaagagtgcgcccaacacggggtcctcattcactggaggtccaacagtctgtgc
cccttgagctgtgacgagctgaatgcagcggagctggagtttgcatgcgagtggaggtac
aatgtctgcgccccagcctgccccatcacctgccagcacccagaacccctggagtgtcct
ctgcagtgtgtggaggggtgccatgcaaactgtcccccaggaaagattttggatgaggtg
gctatgaaatgcattgacccctcccagtgtcgcgtgtgtctccacgaggggagaaggatt
gcccatggcaagaagatcattctgaaccgggagaatgagaacctgtgccagatctgtcac
tgcgaaggcaataacctgtcctgtgagttctgcccattggagttagtaaccaccctggca
cccaccaccttccccgtcaccacttcttacagagacctggtcacgactcccgtcccagag
aacgtgtgccgccgcatgatggacttggctttcatggtggatggctcgtcctcactgaca
gaagacgacttcgagaccgttaaggacttcatcatcaatgtggcggagcggttccacatg
ggcgcggcctatacccgcatgacggtcatgcagtttcacacgggaattaagagctacgag
atgcaggtgcagaaacctgtcttcaagaaggtggtgagggagatgaagtacagtggtggg
gaagcagccttcatcaacgaagccctgaagtacctggcgctgaacatcttcgacaaggac
aagcgagaagatgcttccagagtggctgttctgctgacggccagcacctcgccgcgcaag
atcaagggtatgctgaagctactgtccaagaaatccattaccatgatctccattggcctg
gggccttacatcagcatggaccagatcaaccagatcaccagcaactcgcccagtaacaag
gctgtcattctcagcagcgtcaacgagctccaggagaatgctgaagagctgaccaaatat
ttgtgccaccttggccagatacctacagttccccttccaaaggtgaccaagtctcccaaa
gcccctcctaccaccacaacaactgctagctctattatcagcaaaactcttgtcccttta
aacgctgcttcctctactacctcctcgtccactggtcccaccacctctgcttcccaagcg
cagatagatgtcacctttgtcgttgagggatcagacaaagtgggtgaggagaacttcaac
atcaccaaagaattcctgttgaaatccatccagaagatgtcagttggggagaagaccttc
cacatcaccatcatccagtattcctacaccatcaccattgagtactcattcaccgagagc
cagaggaaggacgacatcctggaaggaatccgtcgcatggaatggcgaggcgggaatgcc
accaataccggagctgctgtttccgaaaccaccttaacaactgcgcaggggagcagggac
caggttcctgatttggttttcctgatatcaagcaatcccccaagtgataccatcacaaaa
tcagccgagcattcccagacaaagatcatacccatcggagtgggaccgcaagtgagagaa
gtggacctggaactcatcggtcatcctcaaaaacccataataattaaagattacaaagat
cttcttgaactaggggtgaccacagtgattgaaacaatcagagcaatagcatcaccatcg
ctccctgcaacccccacaactgctgcccttcatagcacaccagtgccaaccacaatgctg
cccacttcagttccctgtgacagaccaatggatgtgataatcatgctggaagggagcgca
ggaatcccacaaccacagtttgaggaaatgaaaacgttcgtaaaagccttcatcaacaaa
gctgacattggtgccaatggaacccacttggctgtccttcagtatggaaggagcaatagt
cttgaagtgtcttgggtggaccgtcagaataaagagagtctcctcaccagtgtgaactta
atgcagcaaagggaagcggctcccaccagattaggggacgccctgcgattcaccgttcag
agcgcagtatcggaggtgcacggggggcgtccgggggtacccaagatcgcagtgctgatc
gtgacacgcccctcccaggaccctgtggaggaggctgccagggaagcactgactgcagga
gtggcagtgtttcccattggagctgggacacagttcgatgagaaccagctggtcacaatg
gcaggacacgccatgaaagacaacatcatccacctccatcgagtggaagacctccccacc
atggtcactcttgggaaccagttcattgacaaactctgcagagttggaccacctggagtg
tgcgtggatgatgaaggaaatgaaaggaagcccggtgaaacctggactctgtctgaccag
tgccacagcctcctgtgccaccccaacggggctgtcaccatccaaaatcacaaggtgaac
tgtgagaagatgcagaagccagcctgcaagaacaacctgcccagtgtgaagatccaggag
acctgtggctgccgctgggcctgtccctgcatgtgtatggggagctccaccagtcacatt
gttacctttgacggtcttgccttcaagttgacggggtcctgctcttacacgctcctccgc
gatgcggcgcatggcagtgacatcatcctgcacaacgcaccgtgcccagcagaccccaag
cagagctgcatgaagtctatagaggtgaagcacgctggcacctccatcgcactgcgggat
gacatgaaggtcacagtggatggcatggagactgctgctcccttcagctcgaggggtgtt
gaagtgacgctgtacggagctctgatgcacgaggtgaagattcccagccttggctacgtg
ctgaccttcacccctggcaacaatgagttcacagtgcagctcacacccacgctgcgcaca
gccaagacatccggcctgtgcggtttctgcgaccagaacgacatcaatgattttgctctg
aaagacggctcggtgactctggagagccatgtgttcatcaaggagtggaccattcaggac
tcaagtggcccaagctgtgagcccgtggccagcctgacctgcacccaccaggccagcgac
cagtgtctggtcctgcgctccagcatgttccagcgttgccacgccgctgtgccccccgcg
ccctacatcgccctgtgccaggagaccagctgccacggacaggacctctgtcaggttgtg
gctgcctacagtcacctgtgccggttgcagggagtctgcatcaattggagatccgcaggc
ttctgtgcccagcagtgccccagctccatggtgtttgacagctgtaaaactggctgtatc
cagcagtgcgccagccccttcaacagcaccctgtgcatggacacacccactgagggctgc
ttctgtccaccaggcaaagtgttagacaacggagagtgcgtcaaggaggaagcctgctca
cagtgccttgatgagaacagagtggcccacaagcatctggaatcctggattccagagcat
gatccttgtcagatctgcatgtgcttggacaacaggaacatcaactgcactgcgcggcca
tgctccagcaccagagcaccggtatgtggtgcgtgtgaagtgctcaccaagaagaaggac
tcagaccagtgctgccaggagtatgagtgcgtgtgtgacctggtgagctgtgacctgcct
cctctgcccacatgtgcagacgggatgagcgttgtgctgaccaacccaggggaatgcaaa
cctgtgtatgagtgtgcttgcaagaaagaagtctgtaagctggagcccaggccgagctgc
cccccccaccgcaagttcagcaccagagagactcagtgctgtgatcgatacgagtgcacc
tgcaactgtgtcaactccacagtgacctgcccaccaggctacctctccacatctgtgacc
aacgactgtggctgcacagcgatcagctgccttcctgacagtgtgtgtgtccatcatgaa
gttgtgtatcaggttggaagcgtctgggaagaagcctgcaagacttgcagctgcactgac
aagcaggacaaggtcacagcgctccacattgtcgagtgcacagagaaagtgtgcaatgag
atctgcccggtggggactagttacaccacaaaggacggcgaatgctgtggaaagtgtaaa
atatctgcctgccaggaacactcagttggggggccgctggccgacatggacagtgggggc
cgtttacgacatgtgggtgagaggtggcgctctgctcagaacccctgtgttatcagcgag
tgcgtgcaggtgaacgacgaggtgtttataaaccagcagaacctctcctgctcccagttg
gacacgcctcactgcccccccgggactgccctgcagtgcgacaccttcacagactgctgt
ccctcctgccactgcgctcccatggatggctgtgtaatgaacaataccgtcattgggtca
ggagagaccttcttggttgatgagtgcacccgatgccagtgcagtgtggagacgggcgtt
atcaagagatatcgactgctgtgtgggaaagtgacctgcgccccatgtcaggagggatat
aggctggagaaggtgaacgggtcttgctgtgggaaatgtgtagcaaccacttgctctttc
tcgcttaaagatggaacagctattcgcctccaggcaggtgaaatccgggaagatgggtgc
actacttctttgtgtaaagtcaacgagagaggagactttgtgttggaaactaaagtgacc
agctgtccccccttcgataaagacaaatgtgcggctgatgggggtaaggttgtgcaactg
ggcaaaacctgctgtgaaacatgtgcagagccggaatgcaagcagactgttgggattctg
aaatacatcaagatcgatgactgcatgtctgaaaaccaagtggacattcattactgtgag
gggaagtgttccagcaagtccatctactctttggagcaccatcacgtggagagtcactgt
gtgtgctgttcagccacagacacggagcccatggtggttcctctgaggtgtgccaatggg
actgtgctgcagcacgaggtgctgaatgtcaagcagtgtgactgcttatcccacgcatgc
gcaggagagtga
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integrated database retrieval system
