Polyodon spathula (Mississippi paddlefish): 121318906
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Entry
121318906 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04210
Apoptosis
pspa04217
Necroptosis
pspa04510
Focal adhesion
pspa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121318906
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121318906
04217 Necroptosis
121318906
09144 Cellular community - eukaryotes
04510 Focal adhesion
121318906
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121318906
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121318906
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121318906
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121318906
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121318906
Peptidases and inhibitors [BR:
pspa01002
]
Peptidase inhibitors
Family I32: IAP family
121318906
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121318906
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121318906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
UBA_BIRC2-3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121318906
NCBI-ProteinID:
XP_041112035
LinkDB
All DBs
Position
7:56709321..56720241
Genome browser
AA seq
461 aa
AA seq
DB search
MAYSQSDNDLESDNCGDMSEIHTRLQSFHNFPRDNLVSPQRLARAGFFFTGNSDRVRCFS
CNHTVENWSSGDSPVERHQQVSPCCTYLSCTHRVQPATLNGHAAPSANSAPYDEEREDLE
YRLRTGEVVDETDYPKRPDMCSEEARLDTFQSWPPSAPVRPRELAQAGFYYTNSRYWVEC
FCCGGVLGNWEPGDEAWKEHERHFSNCFFILGHEVGNIPCHESPDMDRVPYMGSYEERLS
SFTGQQPPVDPERLARAGFYSTGELDQVMCFHCAGVLKVWQAAEDPWEEHAKHYPGCSFL
IAEKGQAFVNSIQLGNPCRNSAAERVPNGLAVQREDLGIMQSSVVQKALEMGFDAADIER
TVREGLRKTGVEYNSVEALISDLTSAESESDETQDNEEEDPMEKLRKLQQEKLCKVCMDN
NIAIVFIPCGHLVTCKKCSEVLSKCPICCTPIIQKVKTYIS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcttattcccagtctgacaacgatcttgaatcggacaactgtggggatatgtctgaa
atccacacgcggctccagtcattccataacttccccagggataacctggtatctcctcag
aggctggccagagctggctttttcttcaccggcaactccgaccgggtcaggtgcttcagc
tgcaatcacaccgtggagaactggagcagtggggactcccctgtagagaggcatcaacag
gtgtccccttgctgcacgtacctaagctgcacgcacagagtccagccagccacgctcaat
ggacacgcagccccatcagccaacagtgctccgtacgatgaggaaagagaggatctggaa
taccgcctgcgaacgggagaggttgtggacgagactgactatccaaaacgccctgacatg
tgcagcgaggaagccaggctggacaccttccaatcgtggcccccgtctgcccctgtgagg
ccccgggagctggcccaggccgggttctattacacgaactccaggtactgggtagagtgc
ttctgctgcgggggtgtgctggggaactgggagcctggagatgaagcctggaaggagcac
gagaggcacttcagcaactgcttcttcatcctgggccatgaagtgggaaacattccttgc
catgagtccccggacatggatagagttccgtacatgggatcgtatgaggagcgtctcagc
agcttcactggccagcaacctcccgtcgacccagagaggctggcgagggctgggttttac
agtacaggtgagttggaccaggtgatgtgtttccactgtgcaggggtcctgaaggtctgg
caggctgctgaggacccctgggaggaacatgccaaacactatccagggtgtagctttctt
attgcagagaaaggccaagcgtttgtgaacagcatccagttagggaatccctgcaggaac
tctgctgcagaacgtgttcctaatggactggcagtacaacgagaagatttgggcatcatg
cagtcctctgtagtgcagaaggctctggagatgggcttcgatgctgcagatattgagaga
acagtccgggaggggctgcgtaagactggggtggagtataactcagtggaagctctgatc
agtgacctgaccagtgctgaaagcgagtcagatgaaacacaagataatgaggaggaggac
cctatggagaagctgcggaaactacagcaggagaagctctgtaaagtgtgcatggacaat
aacattgccatagtcttcatcccctgtggacacctggtcacctgcaagaagtgttccgag
gtcctcagtaaatgccccatatgctgcacacctatcattcagaaggttaaaacctacatc
tcgtaa
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