Polyodon spathula (Mississippi paddlefish): 121319263
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Entry
121319263 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04144
Endocytosis
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121319263
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121319263
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121319263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121319263
04121 Ubiquitin system [BR:
pspa04121
]
121319263
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121319263
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121319263
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
HECT type E3
121319263
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF6246
Motif
Other DBs
NCBI-GeneID:
121319263
NCBI-ProteinID:
XP_041112444
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All DBs
Position
8:7085469..7112717
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AA seq
884 aa
AA seq
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MACSGSRSGSVNGLTMKAQLQITVLSAKLKENKKNWFGPSPYVEVVVDGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLNFKVWSHQTLKSDALLGVAMLDICETLKSNNMKISEVVETL
QLCSDKDPVEVVGDLSVCLDGMQVDPETFASVDISTLAPSMMQNGDSQRNSDVFRTSRDA
SPSAESIEDMVATNDGAVNGTNSPSLSVGGSRPLRPPRPSRPPPPTPRRPASSVSTNGTL
SITPENLSSSDLSSSEPSVSLVVPSAGGSELPPPSSALPDYGIPGAGPPKNSTARVGPVN
TGPLPPGVFVFKRWEQRVDQNGRVYFVDHIEKRTTWERPEPLPPGWERRVDPMGRIYYVD
HITRSTTWQRPTLESVRNYEQWQLQRNQLQGAMQQFNQRFIVGQDQVSPAPNKEFDPLGP
LPHGWEKRTDSNGRVYFVHHTTRKTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDH
NRRTTTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKISVTRKTLFE
DSFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDN
YCLQINPASFINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLNDLES
IDPEFYNSLIWIKENNIEECGLEMYFSVDKEILGEVTTHELKADGSNVLVTEENKEEYIK
LVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVLLCGMQEIDLADWQRSTIY
RHYARSSKQILWFWQFVKEMDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKV
GKENWLPRSHTCFNRLDLPPYKSYEQMKEKLMFAIEETEGFGQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcagtggttccagatcaggctctgtaaatgggcttacaatgaaagcacagctt
cagatcacagtactttcagccaagctaaaagaaaacaaaaagaactggtttggtcccagt
ccttatgtggaggttgtagtggatggtcagtcgaaaaaaactgaaaaatgtaacaacacc
cacagccccaaatggaaacagcctctcactgtaattgtaaccccgtttagtaagttgaac
ttcaaagtgtggagtcatcaaacattaaaatccgatgctttgttaggagtggccatgttg
gatatctgtgaaactctgaagtccaacaatatgaaaatttccgaggtggttgagacacta
cagctctgcagcgacaaggacccagtagaggttgttggagatttgtctgtttgccttgat
gggatgcaagttgatccagaaacgtttgcatctgtggatatcagcaccctagctccaagt
atgatgcagaatggggattcacaacgaaacagtgatgtttttaggacaagcagagacgct
tctccctcagctgaaagcattgaagacatggttgccacaaatgatggggcagtgaatggc
accaattctccatctctgtcagtaggaggttccagacctctgcgcccacctagaccttct
cgtcctccaccaccaacaccacggagacctgcctcgtcagtctctaccaatgggactttg
tccatcacacctgagaatttgtcttctagtgatctttccagctctgaaccttctgtgagt
cttgtggtgccctccgctgggggttcagagttaccaccacctagctctgcattacctgac
tatgggataccaggtgccggaccgcccaagaactccactgcaagagttggcccagtcaat
acaggacctctccctcctggtgtttttgtttttaaaagatgggagcagagggtagaccag
aatggccgtgtttattttgtagatcacattgaaaagaggacaacctgggaaaggcctgag
cccctgcctcctggctgggaacgtcgtgttgaccctatgggtagaatatattatgttgac
cacatcaccaggtcaacaacctggcagcgccctacactagagtctgtgaggaactatgag
caatggcagctgcagcggaaccagctgcagggagccatgcagcagtttaaccagaggttt
atagttgggcaggatcaagtttcacctgcaccgaataaagaatttgatccacttggacct
ttaccacatggatgggagaaaagaacagacagtaacggcagagtctacttcgttcatcac
accacccgcaaaacccaatgggaagacccacgaacccaaggccttctgaatgataagcca
ttgccagagggttgggagatgaggtttacagttgacggtattccatactttgtggatcac
aatagaagaactacaacgtacattgatcctcgaactgggaagtcatcactagaaaatggg
ccacaaattacatatgtacgagacttcaaagcaaaggtccagtacttcagattctggtgt
cagcaactgtcgatgcctcagcacatcaagatcagcgtaacaaggaaaacactatttgaa
gattcatttcaacagataatgagctttaatgcacaggatcttagaagacgactctggatt
atttttccaggagaggagggtctggactatggaggtgtggcaagggagtggtttttcttg
ctgtcccatgaagtgctgaaccccatgtactgcttatttgaatatgctgggaaggacaac
tactgcctgcagatcaacccagcctccttcatcaaccctgatcatctcaaatacttcaag
ttcatcggcaggttcattgccatggctttgttccatggaaagttcatcgatacaggattc
tccttgcctttttataagcgcatactaaacaagcctgtgggactgaatgatttggaatca
atagaccctgagttctataactcactaatctggataaaagaaaacaacattgaagaatgt
ggcctggaaatgtatttctctgtggacaaagaaattttaggcgaagtcacgacccatgaa
ctgaaagcagatggcagcaatgtactggttacagaagaaaataaagaagagtatatcaag
cttgtagcagagtggaggttgtccagaggtgtggaagagcagacgcaggctttctttgag
ggcttcaatgaagttctcccacagcagtatctacagtattttgatgctaaggagctggaa
gtgcttctctgtggaatgcaggagattgacttggctgactggcagaggagcacaatctac
cgccactatgccaggagcagcaaacaaatcctttggttctggcagtttgttaaagagatg
gacaatgagaagcgaatgaggctgctgcagtttgtcacgggaacatgtcggctaccagtt
ggaggatttgctgacctgatggggagcaatggccctcagaagttctgcattgagaaagtg
gggaaagaaaactggttaccaagaagtcacacctgcttcaaccgtttggatttgccaccg
tacaaaagctatgaacagatgaaagagaagttgatgtttgcaattgaagaaactgagggt
tttgggcaagagtag
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