Polyodon spathula (Mississippi paddlefish): 121319439
Help
Entry
121319439 CDS
T07273
Name
(RefSeq) matrix metalloproteinase-9-like
KO
K01403
matrix metalloproteinase-9 (gelatinase B) [EC:
3.4.24.35
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121319439
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.35 gelatinase B
121319439
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M10
121319439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_4
Reprolysin_3
DUF4953
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
121319439
NCBI-ProteinID:
XP_041112814
LinkDB
All DBs
Position
8:13025724..13033437
Genome browser
AA seq
685 aa
AA seq
DB search
MGAYTLTAVTLGICVLGTYCAPLKSVFVTFPGETLKNMTDQEFANNYLERFGYLNLQERS
SRLASKSKALLRMQKHLGLPETGELNTETLSAMKQPRCGVPDIRNYQTFTGDLKWDHNDI
TYRTLNYSPDMDPDVIDDAFARAFKVWSDVTPLTFTRLYSGTADIMVSFGKLDHGDPYPF
DGKDGLLAHAYSPGEGIQGDAHFDDDEFWTLGTGPAVKTRYGNAEGAMCHFPFLFEGKSY
SSCTTEGRSDNLPWCSTTANFDTDKKYGFCPSELLYTFSGNSDGAECVFPFVFLGETYNK
CTTEGRSDGYRWCATTSNFDKDKKYGFCPNRDTTVTGGNSEGEPCEFPFTFLGKTYDSCT
SEGRGDRKLWCATTSSYDRDQKWGFCPDRGYSLFLVAAHEFGHALGLDHSNIRDALMFPM
YSYVEDFQLHQDDIAGIQYLYGPKTGPDPTPPQPTDESPKTTTPSAETPQTPVTTPDTPV
TTSHPIDPSQDACKVNQFDAISEIKGELHLFKDGQYWRVSAQRKGEIKGPFPIADKWPAL
PATIDTAFEDLLTKKIFFFSGKRFWVYHGQNVLGPRSLDKLGLGSDVDQIVGAIQRGKGK
VLLFNGGNYWRMDVKAQTIDKGYPRKTDEVFGGVPVDSHDVFLYKGSYYFCWDRFYWRMN
TRRQVNRVGYVKYDILMCADPSRRY
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgggagcctacactctcaccgctgtcaccttgggcatctgtgtcctaggcacttactgc
gctccactcaagtctgtctttgtaactttccctggagagacgctcaagaacatgactgac
caggagtttgccaataactacctggagcgctttggatacctcaacctgcaggagcgcagc
tctcgtctagcctccaagtccaaggcactgctaaggatgcagaagcacctgggtcttcca
gagactggggagctgaacacagagacactgagcgctatgaaacagccacgctgtggagtc
cctgacattcgaaactaccagaccttcactggagacctcaagtgggaccacaacgacatt
acatacaggaccctgaactactccccggacatggaccccgacgtcattgatgacgccttc
gctcgggccttcaaggtgtggagtgatgtgacccctctgacctttacacgcctctactcc
ggaacggccgacatcatggtgtccttcggaaagctagatcatggggacccctaccctttt
gacgggaaggacgggctgctggcacacgcctactcccctggcgagggcatccagggagat
gcacacttcgacgacgacgagttctggaccctgggcaccggtccagccgtgaagacgcga
tacggcaacgctgagggcgccatgtgtcacttccccttcctgtttgagggcaagtcctac
tccagctgtaccacagagggtcgctctgacaacctcccctggtgctctaccacggctaac
ttcgacaccgacaagaaatacggcttctgccccagtgaactgctctacacctttagtggg
aacagtgatggagcggagtgcgtgttccccttcgtgttcctgggcgagacctacaacaag
tgcacgaccgaggggcgcagcgacggctatcgctggtgtgccaccaccagcaacttcgac
aaggacaagaagtatggcttctgccccaaccgagacacaacagtgactggtggaaactca
gagggggaaccttgcgaatttcctttcacgttcctggggaagacatacgattcctgcacc
agcgagggccgtggggacaggaagctgtggtgcgcgactaccagcagttacgacagggac
cagaaatgggggttctgcccagaccgaggatacagcctcttccttgtggcggcccacgaa
tttggccacgctctaggcctggatcactccaacatccgtgatgctctgatgttccccatg
tacagctatgtggaagacttccagctgcaccaggatgacattgctgggatccagtacctc
tacggtcccaaaaccggaccggaccccactccaccccagcctactgatgaatcccctaaa
accaccacccccagtgcagaaaccccccagacccctgtcacgaccccagacactcccgtc
accacctcccaccccattgacccctctcaggacgcctgtaaggtgaatcagttcgacgct
atctcagagatcaagggtgagctccacctcttcaaggacggacaatactggagggtctct
gcacagagaaaaggagagatcaagggcccgttccccattgctgataaatggccggctctt
cctgccaccatcgacaccgcctttgaggacctgctcaccaagaagatcttcttcttctca
ggcaagcgtttctgggtgtaccatggtcagaacgtgctgggcccccgcagtcttgacaag
cttggtctgggcagtgatgtggatcaaattgtaggagccatccagagggggaagggcaag
gtgctcctcttcaatggagggaactactggagaatggacgtgaaagctcagaccattgat
aagggatatccgcgcaaaactgatgaggtctttggtggcgtgcccgttgactcccatgat
gtctttctttacaaaggaagctactacttttgctgggaccgtttctactggaggatgaac
acccgtcgccaggtcaacagagtgggctacgtgaagtatgacatcctgatgtgtgcggat
ccctcacgccgctactga
DBGET
integrated database retrieval system
