Polyodon spathula (Mississippi paddlefish): 121319676
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Entry
121319676 CDS
T07273
Name
(RefSeq) bile acid receptor-like isoform X1
KO
K08537
farnesoid X receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121319676
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121319676
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121319676
Nuclear receptors [BR:
pspa03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
121319676
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121319676
NCBI-ProteinID:
XP_041113283
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Position
8:complement(26103260..26137528)
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AA seq
476 aa
AA seq
DB search
MNEWMGSDINVLGPLQLPASDGFSLSENSQFFDLLTEQDSPLMHDPDVLSFPSYPSMQFS
PVQPPMASPPYYSNHSYYLQYPEEWYSTAGVHELRKLPCENRYEKGIEGITPVCKRSKQA
LHARRIKGDELCVVCADKASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCEMDMYM
RRKCQECRLRKCKEMGMLSECLLTEIQCKSKRLRKNTKLSSDECVREETDGADAKQVTST
TKPSKNVELTQEELSLLNYIFEAYNKYRIPLDMTKNLLQEQFSADENFILLTEMATSHVQ
VLVEFTKRLPGFQSLDHEDQIALLKGSAVEAMFLRSAQVLTRKLPHGYSEVLEDRIRKSG
ISDEYITPMFNFYKSVGELQMTQEEHALLTAVTILSPDRPFVKDVLSVERLQEPMLEVLH
KFCKLHHPHDPQHFARLLGRLTELRTLNHHHAEMLMSWKVNDHKFTPLLCEIWDMQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtggatggggtcagatataaatgtgttggggccgcttcagctgcctgccagt
gatggcttttctttatctgaaaactcccagttctttgatttgctgactgaacaagacagc
cctctgatgcatgatccagatgtgctgtccttccccagctatcccagcatgcaattctct
ccggtacagccacccatggcctccccaccttactactccaaccacagttactaccttcag
taccctgaggagtggtactccactgctggagttcatgaactgagaaaactgccctgtgag
aacagatatgaaaaggggatagaagggattacacctgtgtgcaagaggtcaaaacaggca
cttcatgcaaggcggataaagggggatgaactatgtgtagtttgtgcggacaaggcctct
ggataccattacaatgcacttacttgtgagggatgcaaaggtttcttcaggaggagtatc
acaaagaatgcagtgtacaaatgtaagaatggcgggaactgtgagatggacatgtacatg
aggaggaagtgccaggagtgtcgactcaggaagtgcaaggagatgggaatgctctcagaa
tgtttgttaacagagatacagtgcaagtcaaagagactaagaaaaaataccaagctgtca
tctgatgagtgcgtcagggaagagactgatggtgctgatgccaagcaggtcacatccaca
acaaaaccttcaaagaatgttgaactcacccaggaagagttaagcctcctcaattacatc
tttgaagcctacaacaagtatcgcattccactagacatgaccaaaaaccttctccaagag
cagttcagtgctgatgaaaactttattttactcactgaaatggctacaagtcatgtgcaa
gtactggtggaatttacaaaaaggcttccaggattccagtctctggaccacgaggaccag
attgctttgctaaagggctctgcagtagaagcaatgttccttcgatctgcacaggtactt
accaggaagctgccgcatgggtacagtgaggtgctggaggacaggattcggaagagcggt
atatcagatgaatacatcaccccaatgttcaatttctacaaaagcgttggagagttgcag
atgactcaggaagagcatgctcttctaacagccgtaactatcctgagtccagaccgtccc
tttgtgaaggatgtattgtctgtagaaagacttcaggagcctatgcttgaagttctgcac
aagttctgcaagctgcaccacccacacgacccccagcactttgcccgtctactggggcgc
ctgactgagctacggacattaaaccaccaccacgcagaaatgctgatgtcatggaaagtg
aatgaccacaaattcacacccctgctctgtgaaatctgggacatgcagtga
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